RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 CHMP4AQ9BY43 222 aa17.97■□□□□ 0.47
DDX41-212ENST00000511040 SLC4A2P04920 1241 aa17.96■□□□□ 0.47
DDX41-212ENST00000511040 STYK1Q6J9G0 422 aa17.96■□□□□ 0.47
DDX41-212ENST00000511040 C3orf67Q6ZVT6 689 aa17.96■□□□□ 0.47
DDX41-212ENST00000511040 SYNE4Q8N205 404 aa17.96■□□□□ 0.47
DDX41-212ENST00000511040 MASTLQ96GX5 879 aa17.96■□□□□ 0.47
DDX41-212ENST00000511040 ARFGEF2Q9Y6D5 1785 aa17.96■□□□□ 0.47
DDX41-212ENST00000511040 CDCA7LQ96GN5 454 aa17.95■□□□□ 0.46
DDX41-212ENST00000511040 ISCA1Q9BUE6 129 aa17.95■□□□□ 0.46
DDX41-212ENST00000511040 TRMT112Q9UI30 125 aaKnown RBP17.95■□□□□ 0.46
DDX41-212ENST00000511040 CACNA1SQ13698 1873 aa17.95■□□□□ 0.46
DDX41-212ENST00000511040 KLRG2A4D1S0 409 aaPredicted RBP17.94■□□□□ 0.46
DDX41-212ENST00000511040 C21orf2O43822 256 aa17.94■□□□□ 0.46
DDX41-212ENST00000511040 NPR1P16066 1061 aa17.94■□□□□ 0.46
DDX41-212ENST00000511040 PRPF40BQ6NWY9 871 aaKnown RBP17.94■□□□□ 0.46
DDX41-212ENST00000511040 CNKSR1Q969H4 720 aa17.94■□□□□ 0.46
DDX41-212ENST00000511040 MYD88Q99836 296 aa17.94■□□□□ 0.46
DDX41-212ENST00000511040 MAP3K2Q9Y2U5 619 aa17.94■□□□□ 0.46
DDX41-212ENST00000511040 SLX4Q8IY92 1834 aa17.93■□□□□ 0.46
DDX41-212ENST00000511040 E9PSI1 815 aa17.93■□□□□ 0.46
DDX41-212ENST00000511040 DDX58O95786 925 aaKnown RBP17.93■□□□□ 0.46
DDX41-212ENST00000511040 HCLS1P14317 486 aaPredicted RBP17.93■□□□□ 0.46
DDX41-212ENST00000511040 RTL5Q5HYW3 569 aaPredicted RBP17.93■□□□□ 0.46
DDX41-212ENST00000511040 PI4KAP2A4QPH2 592 aa17.92■□□□□ 0.46
DDX41-212ENST00000511040 RASSF7Q02833 373 aa17.92■□□□□ 0.46
DDX41-212ENST00000511040 SLFN5Q08AF3 891 aa17.92■□□□□ 0.46
DDX41-212ENST00000511040 PI4KAP1Q8N8J0 262 aa17.92■□□□□ 0.46
DDX41-212ENST00000511040 ZNF784Q8NCA9 323 aaPredicted RBP17.92■□□□□ 0.46
DDX41-212ENST00000511040 RPGRQ92834 1020 aaKnown RBP17.92■□□□□ 0.46
DDX41-212ENST00000511040 SH3TC1Q8TE82 1336 aa17.92■□□□□ 0.46
DDX41-212ENST00000511040 ADCY9O60503 1353 aa17.91■□□□□ 0.46
DDX41-212ENST00000511040 CRY2Q49AN0 593 aa17.91■□□□□ 0.46
DDX41-212ENST00000511040 SLC10A5Q5PT55 438 aa17.91■□□□□ 0.46
DDX41-212ENST00000511040 KSR2Q6VAB6 950 aa17.91■□□□□ 0.46
DDX41-212ENST00000511040 FAM89AQ96GI7 184 aa17.91■□□□□ 0.46
DDX41-212ENST00000511040 METTL22Q9BUU2 404 aaPredicted RBP17.91■□□□□ 0.46
DDX41-212ENST00000511040 FLIIQ13045 1269 aa17.9■□□□□ 0.46
DDX41-212ENST00000511040 C9orf131Q5VYM1 1079 aa17.9■□□□□ 0.46
DDX41-212ENST00000511040 JARID2Q92833 1246 aaPredicted RBP17.9■□□□□ 0.46
DDX41-212ENST00000511040 NLRP3Q96P20 1036 aa17.9■□□□□ 0.46
DDX41-212ENST00000511040 RIC1Q4ADV7 1423 aa17.89■□□□□ 0.46
DDX41-212ENST00000511040 TRIM28Q13263 835 aaKnown RBP17.89■□□□□ 0.45
DDX41-212ENST00000511040 FKBP5Q13451 457 aaPredicted RBP17.89■□□□□ 0.45
DDX41-212ENST00000511040 OLFM4Q6UX06 510 aa17.89■□□□□ 0.45
DDX41-212ENST00000511040 RNF123Q5XPI4 1314 aa17.89■□□□□ 0.45
DDX41-212ENST00000511040 NFKBIEO00221 500 aa17.88■□□□□ 0.45
DDX41-212ENST00000511040 ZNF526Q8TF50 670 aaPredicted RBP17.88■□□□□ 0.45
DDX41-212ENST00000511040 RNF181Q9P0P0 153 aa17.88■□□□□ 0.45
DDX41-212ENST00000511040 IGKV5-2P06315 115 aa17.87■□□□□ 0.45
DDX41-212ENST00000511040 ALDH1B1P30837 517 aa17.87■□□□□ 0.45
DDX41-212ENST00000511040 HOXA10P31260 410 aaPredicted RBP17.87■□□□□ 0.45
DDX41-212ENST00000511040 PRELPP51888 382 aa17.87■□□□□ 0.45
DDX41-212ENST00000511040 HNRNPUQ00839 825 aaKnown RBP eCLIP17.87■□□□□ 0.45
DDX41-212ENST00000511040 SLC51AQ86UW1 340 aa17.87■□□□□ 0.45
DDX41-212ENST00000511040 C7orf43Q8WVR3 580 aa17.87■□□□□ 0.45
DDX41-212ENST00000511040 RBM17Q96I25 401 aaKnown RBP17.87■□□□□ 0.45
DDX41-212ENST00000511040 CWC25Q9NXE8 425 aaPredicted RBP17.87■□□□□ 0.45
DDX41-212ENST00000511040 LAMB2P55268 1798 aa17.86■□□□□ 0.45
DDX41-212ENST00000511040 IRS4O14654 1257 aaPredicted RBP17.86■□□□□ 0.45
DDX41-212ENST00000511040 CWF19L2Q2TBE0 894 aaKnown RBP17.86■□□□□ 0.45
DDX41-212ENST00000511040 CCDC191Q8NCU4 936 aa17.86■□□□□ 0.45
DDX41-212ENST00000511040 F6X3S4 739 aa17.85■□□□□ 0.45
DDX41-212ENST00000511040 CACNA1FO60840 1977 aa17.85■□□□□ 0.45
DDX41-212ENST00000511040 NEXNQ0ZGT2 675 aa17.85■□□□□ 0.45
DDX41-212ENST00000511040 DDX60Q8IY21 1712 aaKnown RBP17.85■□□□□ 0.45
DDX41-212ENST00000511040 TRMT2AQ8IZ69 625 aaKnown RBP17.85■□□□□ 0.45
DDX41-212ENST00000511040 ZBTB38Q8NAP3 1195 aaPredicted RBP17.85■□□□□ 0.45
DDX41-212ENST00000511040 CRAMP1Q96RY5 1269 aa17.85■□□□□ 0.45
DDX41-212ENST00000511040 SBF1O95248 1867 aa17.84■□□□□ 0.45
DDX41-212ENST00000511040 ABCC4O15439 1325 aa17.84■□□□□ 0.45
DDX41-212ENST00000511040 NEURL1BA8MQ27 555 aa17.84■□□□□ 0.45
DDX41-212ENST00000511040 CCDC93Q567U6 631 aa17.84■□□□□ 0.45
DDX41-212ENST00000511040 DNAAF4Q8WXU2 420 aa17.84■□□□□ 0.45
DDX41-212ENST00000511040 PPEF1O14829 653 aaPredicted RBP17.83■□□□□ 0.44
DDX41-212ENST00000511040 PCCAP05165 728 aaPredicted RBP17.83■□□□□ 0.44
DDX41-212ENST00000511040 LMNB1P20700 586 aa17.83■□□□□ 0.44
DDX41-212ENST00000511040 SOGA3Q5TF21 947 aa17.83■□□□□ 0.44
DDX41-212ENST00000511040 BCL2L13Q9BXK5 485 aa17.83■□□□□ 0.44
DDX41-212ENST00000511040 TAOK3Q9H2K8 898 aa17.83■□□□□ 0.44
DDX41-212ENST00000511040 FER1L6Q2WGJ9 1857 aa17.83■□□□□ 0.44
DDX41-212ENST00000511040 DDX46Q7L014 1031 aaKnown RBP17.82■□□□□ 0.44
DDX41-212ENST00000511040 MRPL50Q8N5N7 158 aaKnown RBP17.82■□□□□ 0.44
DDX41-212ENST00000511040 SSH1Q8WYL5 1049 aa17.82■□□□□ 0.44
DDX41-212ENST00000511040 TAF1P21675 1872 aa17.82■□□□□ 0.44
DDX41-212ENST00000511040 CCDC88AQ3V6T2 1871 aa17.82■□□□□ 0.44
DDX41-212ENST00000511040 CCDC85AQ96PX6 553 aaPredicted RBP17.81■□□□□ 0.44
DDX41-212ENST00000511040 SF3B3Q15393 1217 aaKnown RBP17.8■□□□□ 0.44
DDX41-212ENST00000511040 ZNF277Q9NRM2 450 aaPredicted RBP17.8■□□□□ 0.44
DDX41-212ENST00000511040 LTBP3Q9NS15 1303 aa17.79■□□□□ 0.44
DDX41-212ENST00000511040 GRAPQ13588 217 aa17.79■□□□□ 0.44
DDX41-212ENST00000511040 GCKRQ14397 625 aa17.79■□□□□ 0.44
DDX41-212ENST00000511040 SLC4A10Q6U841 1118 aa17.79■□□□□ 0.44
DDX41-212ENST00000511040 UBE3BQ7Z3V4 1068 aa17.79■□□□□ 0.44
DDX41-212ENST00000511040 RTKN2Q8IZC4 609 aa17.79■□□□□ 0.44
DDX41-212ENST00000511040 LINS1Q8NG48 757 aa17.79■□□□□ 0.44
DDX41-212ENST00000511040 GRAPLQ8TC17 118 aaPredicted RBP17.79■□□□□ 0.44
DDX41-212ENST00000511040 GPBP1L1Q9HC44 474 aaPredicted RBP17.79■□□□□ 0.44
DDX41-212ENST00000511040 COL4A1P02462 1669 aa17.78■□□□□ 0.44
DDX41-212ENST00000511040 PDE8AO60658 829 aa17.78■□□□□ 0.44
DDX41-212ENST00000511040 FKBP4Q02790 459 aaKnown RBP eCLIP17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms