RNA–Protein interactions for RNA: ENST00000509415.5

CALCOCO2-214, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 4

Gene CALCOCO2, Length 558 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-214ENST00000509415 IARSP41252 1262 aaKnown RBP13.94□□□□□ -0.18
CALCOCO2-214ENST00000509415 TMPOP42166 694 aaKnown RBP13.94□□□□□ -0.18
CALCOCO2-214ENST00000509415 SUSD4Q5VX71 490 aa13.94□□□□□ -0.18
CALCOCO2-214ENST00000509415 SYNE4Q8N205 404 aa13.94□□□□□ -0.18
CALCOCO2-214ENST00000509415 RPGRQ92834 1020 aaKnown RBP13.94□□□□□ -0.18
CALCOCO2-214ENST00000509415 PSMD1Q99460 953 aa13.94□□□□□ -0.18
CALCOCO2-214ENST00000509415 MYBBP1AQ9BQG0 1328 aaKnown RBP13.93□□□□□ -0.18
CALCOCO2-214ENST00000509415 ZNF541Q9H0D2 1346 aa13.93□□□□□ -0.18
CALCOCO2-214ENST00000509415 NTSR2O95665 410 aa13.93□□□□□ -0.18
CALCOCO2-214ENST00000509415 EIF2S2P20042 333 aaKnown RBP13.93□□□□□ -0.18
CALCOCO2-214ENST00000509415 PDIA6Q15084 440 aa13.93□□□□□ -0.18
CALCOCO2-214ENST00000509415 CC2D2BQ6DHV5 1058 aa13.93□□□□□ -0.18
CALCOCO2-214ENST00000509415 LRP10Q7Z4F1 713 aa13.93□□□□□ -0.18
CALCOCO2-214ENST00000509415 PPP1R42Q7Z4L9 355 aa13.93□□□□□ -0.18
CALCOCO2-214ENST00000509415 TAF1DQ9H5J8 278 aaPredicted RBP13.93□□□□□ -0.18
CALCOCO2-214ENST00000509415 FZD9O00144 591 aa13.92□□□□□ -0.18
CALCOCO2-214ENST00000509415 GRIPAP1Q4V328 841 aa13.92□□□□□ -0.18
CALCOCO2-214ENST00000509415 PARP10Q53GL7 1025 aa13.92□□□□□ -0.18
CALCOCO2-214ENST00000509415 LDHDQ86WU2 507 aa13.92□□□□□ -0.18
CALCOCO2-214ENST00000509415 RBM17Q96I25 401 aaKnown RBP13.92□□□□□ -0.18
CALCOCO2-214ENST00000509415 CRAMP1Q96RY5 1269 aa13.92□□□□□ -0.18
CALCOCO2-214ENST00000509415 CREBZFQ9NS37 354 aa13.92□□□□□ -0.18
CALCOCO2-214ENST00000509415 COL4A5P29400 1685 aa13.91□□□□□ -0.18
CALCOCO2-214ENST00000509415 TRPM7Q96QT4 1865 aa13.91□□□□□ -0.18
CALCOCO2-214ENST00000509415 DDX10Q13206 875 aaKnown RBP13.91□□□□□ -0.18
CALCOCO2-214ENST00000509415 PROSER3Q2NL68 480 aa13.91□□□□□ -0.18
CALCOCO2-214ENST00000509415 HACL1Q9UJ83 578 aa13.91□□□□□ -0.18
CALCOCO2-214ENST00000509415 LTBP1Q14766 1721 aa13.9□□□□□ -0.18
CALCOCO2-214ENST00000509415 DDX60Q8IY21 1712 aaKnown RBP13.9□□□□□ -0.18
CALCOCO2-214ENST00000509415 ANXA1P04083 346 aa13.9□□□□□ -0.18
CALCOCO2-214ENST00000509415 CCDC146Q8IYE0 955 aa13.9□□□□□ -0.18
CALCOCO2-214ENST00000509415 GPC2Q8N158 579 aa13.9□□□□□ -0.18
CALCOCO2-214ENST00000509415 JDP2Q8WYK2 163 aa13.9□□□□□ -0.18
CALCOCO2-214ENST00000509415 RNF123Q5XPI4 1314 aa13.9□□□□□ -0.19
CALCOCO2-214ENST00000509415 PASKQ96RG2 1323 aa13.9□□□□□ -0.19
CALCOCO2-214ENST00000509415 PPEF1O14829 653 aaPredicted RBP13.89□□□□□ -0.19
CALCOCO2-214ENST00000509415 NEUROD2Q15784 382 aa13.89□□□□□ -0.19
CALCOCO2-214ENST00000509415 EAPPQ56P03 285 aaPredicted RBP13.89□□□□□ -0.19
CALCOCO2-214ENST00000509415 SLC10A5Q5PT55 438 aa13.89□□□□□ -0.19
CALCOCO2-214ENST00000509415 C3orf67Q6ZVT6 689 aa13.89□□□□□ -0.19
CALCOCO2-214ENST00000509415 RUNDC1Q96C34 613 aa13.89□□□□□ -0.19
CALCOCO2-214ENST00000509415 NLRP3Q96P20 1036 aa13.89□□□□□ -0.19
CALCOCO2-214ENST00000509415 UTP14AQ9BVJ6 771 aaKnown RBP13.89□□□□□ -0.19
CALCOCO2-214ENST00000509415 CHL1O00533 1208 aa13.88□□□□□ -0.19
CALCOCO2-214ENST00000509415 EPHX2P34913 555 aa13.88□□□□□ -0.19
CALCOCO2-214ENST00000509415 EIF6P56537 245 aaKnown RBP13.88□□□□□ -0.19
CALCOCO2-214ENST00000509415 WDR43Q15061 677 aaKnown RBP eCLIP13.88□□□□□ -0.19
CALCOCO2-214ENST00000509415 HSP90AB3PQ58FF7 597 aa13.88□□□□□ -0.19
CALCOCO2-214ENST00000509415 COL13A1Q5TAT6 717 aaPredicted RBP13.88□□□□□ -0.19
CALCOCO2-214ENST00000509415 COPS6Q7L5N1 327 aa13.88□□□□□ -0.19
CALCOCO2-214ENST00000509415 PNMA8AQ86V59 439 aaPredicted RBP13.88□□□□□ -0.19
CALCOCO2-214ENST00000509415 NECTIN2Q92692 538 aa13.88□□□□□ -0.19
CALCOCO2-214ENST00000509415 ANP32EQ9BTT0 268 aa13.88□□□□□ -0.19
CALCOCO2-214ENST00000509415 TRIM35Q9UPQ4 493 aa13.88□□□□□ -0.19
CALCOCO2-214ENST00000509415 ITGBL1O95965 494 aaPredicted RBP13.87□□□□□ -0.19
CALCOCO2-214ENST00000509415 HSPA1AP0DMV8 641 aaKnown RBP13.87□□□□□ -0.19
CALCOCO2-214ENST00000509415 HSPA1BP0DMV9 641 aaKnown RBP13.87□□□□□ -0.19
CALCOCO2-214ENST00000509415 AIMP1Q12904 312 aaKnown RBP13.87□□□□□ -0.19
CALCOCO2-214ENST00000509415 LARGE2Q8N3Y3 721 aa13.87□□□□□ -0.19
CALCOCO2-214ENST00000509415 XAGE3Q8WTP9 111 aa13.87□□□□□ -0.19
CALCOCO2-214ENST00000509415 DDX21Q9NR30 783 aaKnown RBP eCLIP13.87□□□□□ -0.19
CALCOCO2-214ENST00000509415 CLEC11AQ9Y240 323 aa13.87□□□□□ -0.19
CALCOCO2-214ENST00000509415 ABCC4O15439 1325 aa13.87□□□□□ -0.19
CALCOCO2-214ENST00000509415 LRRC37AA6NMS7 1700 aa13.87□□□□□ -0.19
CALCOCO2-214ENST00000509415 TCERG1O14776 1098 aaKnown RBP13.86□□□□□ -0.19
CALCOCO2-214ENST00000509415 KRT24Q2M2I5 525 aa13.86□□□□□ -0.19
CALCOCO2-214ENST00000509415 SLC51AQ86UW1 340 aa13.86□□□□□ -0.19
CALCOCO2-214ENST00000509415 NLRP10Q86W26 655 aa13.86□□□□□ -0.19
CALCOCO2-214ENST00000509415 TMX4Q9H1E5 349 aaPredicted RBP13.86□□□□□ -0.19
CALCOCO2-214ENST00000509415 MKRN1Q9UHC7 482 aaKnown RBP13.86□□□□□ -0.19
CALCOCO2-214ENST00000509415 ATP6V0A2Q9Y487 856 aa13.86□□□□□ -0.19
CALCOCO2-214ENST00000509415 LAS1LQ9Y4W2 734 aaKnown RBP13.86□□□□□ -0.19
CALCOCO2-214ENST00000509415 CNTNAP1P78357 1384 aa13.85□□□□□ -0.19
CALCOCO2-214ENST00000509415 TMEM88BA6NKF7 163 aa13.85□□□□□ -0.19
CALCOCO2-214ENST00000509415 HOXB7P09629 217 aa13.85□□□□□ -0.19
CALCOCO2-214ENST00000509415 TCIRG1Q13488 830 aa13.85□□□□□ -0.19
CALCOCO2-214ENST00000509415 VPS33BQ9H267 617 aa13.85□□□□□ -0.19
CALCOCO2-214ENST00000509415 ADAMTS8Q9UP79 889 aa13.85□□□□□ -0.19
CALCOCO2-214ENST00000509415 GJA3Q9Y6H8 435 aa13.85□□□□□ -0.19
CALCOCO2-214ENST00000509415 PPIP5K2O43314 1243 aa13.84□□□□□ -0.19
CALCOCO2-214ENST00000509415 LMOD1P29536 600 aaPredicted RBP13.84□□□□□ -0.19
CALCOCO2-214ENST00000509415 HDGFL1Q5TGJ6 251 aa13.84□□□□□ -0.19
CALCOCO2-214ENST00000509415 NIM1KQ8IY84 436 aa13.84□□□□□ -0.19
CALCOCO2-214ENST00000509415 MIER1Q8N108 512 aa13.84□□□□□ -0.19
CALCOCO2-214ENST00000509415 CHPF2Q9P2E5 772 aa13.84□□□□□ -0.19
CALCOCO2-214ENST00000509415 TRMT112Q9UI30 125 aaKnown RBP13.84□□□□□ -0.19
CALCOCO2-214ENST00000509415 BBOX1O75936 387 aa13.83□□□□□ -0.2
CALCOCO2-214ENST00000509415 HCLS1P14317 486 aaPredicted RBP13.83□□□□□ -0.2
CALCOCO2-214ENST00000509415 SCNN1DP51172 638 aa13.83□□□□□ -0.2
CALCOCO2-214ENST00000509415 MAP1SQ66K74 1059 aaPredicted RBP13.83□□□□□ -0.2
CALCOCO2-214ENST00000509415 CNTROBQ8N137 903 aa13.83□□□□□ -0.2
CALCOCO2-214ENST00000509415 SUPT20HQ8NEM7 779 aa13.83□□□□□ -0.2
CALCOCO2-214ENST00000509415 RTFDC1Q9BY42 306 aaPredicted RBP13.83□□□□□ -0.2
CALCOCO2-214ENST00000509415 SH3TC1Q8TE82 1336 aa13.83□□□□□ -0.2
CALCOCO2-214ENST00000509415 POLR2AP24928 1970 aaKnown RBP13.82□□□□□ -0.2
CALCOCO2-214ENST00000509415 AOC3Q16853 763 aa13.82□□□□□ -0.2
CALCOCO2-214ENST00000509415 DDX46Q7L014 1031 aaKnown RBP13.82□□□□□ -0.2
CALCOCO2-214ENST00000509415 SP8Q8IXZ3 490 aa13.82□□□□□ -0.2
CALCOCO2-214ENST00000509415 TNS4Q8IZW8 715 aa13.82□□□□□ -0.2
CALCOCO2-214ENST00000509415 PLBD2Q8NHP8 589 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms