RNA–Protein interactions for RNA: ENST00000508466.1

LIMCH1-207, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2

Gene LIMCH1, Length 3,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-207ENST00000508466 YY1AP1Q9H869 796 aa8.48□□□□□ -1.05
LIMCH1-207ENST00000508466 TPCN1Q9ULQ1 816 aa8.48□□□□□ -1.05
LIMCH1-207ENST00000508466 EVC2Q86UK5 1308 aa8.47□□□□□ -1.05
LIMCH1-207ENST00000508466 IRF6O14896 467 aa8.47□□□□□ -1.05
LIMCH1-207ENST00000508466 ZMYND10O75800 440 aa8.47□□□□□ -1.05
LIMCH1-207ENST00000508466 SF3A3Q12874 501 aaKnown RBP eCLIP8.47□□□□□ -1.05
LIMCH1-207ENST00000508466 ALDH1L2Q3SY69 923 aa8.47□□□□□ -1.05
LIMCH1-207ENST00000508466 ARMC3Q5W041 872 aa8.47□□□□□ -1.05
LIMCH1-207ENST00000508466 ARFGAP3Q9NP61 516 aa8.47□□□□□ -1.05
LIMCH1-207ENST00000508466 PLB1Q6P1J6 1458 aa8.47□□□□□ -1.05
LIMCH1-207ENST00000508466 FANCD2Q9BXW9 1451 aa8.47□□□□□ -1.05
LIMCH1-207ENST00000508466 IQCB1Q15051 598 aa8.47□□□□□ -1.05
LIMCH1-207ENST00000508466 KCTD19Q17RG1 926 aaPredicted RBP8.47□□□□□ -1.05
LIMCH1-207ENST00000508466 LONRF2Q1L5Z9 754 aa8.47□□□□□ -1.05
LIMCH1-207ENST00000508466 MUM1L1Q5H9M0 696 aa8.47□□□□□ -1.05
LIMCH1-207ENST00000508466 LEO1Q8WVC0 666 aaPredicted RBP8.47□□□□□ -1.05
LIMCH1-207ENST00000508466 CENPHQ9H3R5 247 aa8.47□□□□□ -1.05
LIMCH1-207ENST00000508466 AKAP2Q9Y2D5 859 aa8.47□□□□□ -1.05
LIMCH1-207ENST00000508466 SAMM50Q9Y512 469 aa8.47□□□□□ -1.05
LIMCH1-207ENST00000508466 ATP6V1DQ9Y5K8 247 aa8.47□□□□□ -1.05
LIMCH1-207ENST00000508466 CLASP1Q7Z460 1538 aa8.47□□□□□ -1.05
LIMCH1-207ENST00000508466 EIF2S2P20042 333 aaKnown RBP8.46□□□□□ -1.05
LIMCH1-207ENST00000508466 MAGEA9P43362 315 aa8.46□□□□□ -1.05
LIMCH1-207ENST00000508466 MRPS25P82663 173 aaKnown RBP8.46□□□□□ -1.05
LIMCH1-207ENST00000508466 HSP90AB3PQ58FF7 597 aa8.46□□□□□ -1.05
LIMCH1-207ENST00000508466 NBPF11Q86T75 865 aa8.46□□□□□ -1.05
LIMCH1-207ENST00000508466 ANKRD20A12PQ8NF67 263 aa8.46□□□□□ -1.05
LIMCH1-207ENST00000508466 FUT8Q9BYC5 575 aa8.46□□□□□ -1.05
LIMCH1-207ENST00000508466 SFPQP23246 707 aaKnown RBP eCLIP8.46□□□□□ -1.06
LIMCH1-207ENST00000508466 MSH6P52701 1360 aa8.46□□□□□ -1.06
LIMCH1-207ENST00000508466 BIRC2Q13490 618 aa8.46□□□□□ -1.06
LIMCH1-207ENST00000508466 NOM1Q5C9Z4 860 aaKnown RBP8.46□□□□□ -1.06
LIMCH1-207ENST00000508466 CCDC141Q6ZP82 1450 aa8.46□□□□□ -1.06
LIMCH1-207ENST00000508466 TMEM87AQ8NBN3 555 aa8.46□□□□□ -1.06
LIMCH1-207ENST00000508466 TDRD7Q8NHU6 1098 aaKnown RBP8.46□□□□□ -1.06
LIMCH1-207ENST00000508466 HYPKQ9NX55 129 aa8.46□□□□□ -1.06
LIMCH1-207ENST00000508466 EMILIN1Q9Y6C2 1016 aa8.46□□□□□ -1.06
LIMCH1-207ENST00000508466 CFAP74Q9C0B2 1584 aa8.46□□□□□ -1.06
LIMCH1-207ENST00000508466 PRDM15P57071 1507 aaPredicted RBP8.46□□□□□ -1.06
LIMCH1-207ENST00000508466 A0A1B0GVL5 298 aa8.45□□□□□ -1.06
LIMCH1-207ENST00000508466 GOLIM4O00461 696 aa8.45□□□□□ -1.06
LIMCH1-207ENST00000508466 CHGBP05060 677 aa8.45□□□□□ -1.06
LIMCH1-207ENST00000508466 CCDC93Q567U6 631 aa8.45□□□□□ -1.06
LIMCH1-207ENST00000508466 LRRC31Q6UY01 552 aa8.45□□□□□ -1.06
LIMCH1-207ENST00000508466 PRAM1Q96QH2 718 aa8.45□□□□□ -1.06
LIMCH1-207ENST00000508466 SEC62Q99442 399 aaKnown RBP8.45□□□□□ -1.06
LIMCH1-207ENST00000508466 SDF4Q9BRK5 362 aa8.45□□□□□ -1.06
LIMCH1-207ENST00000508466 CARD10Q9BWT7 1032 aa8.45□□□□□ -1.06
LIMCH1-207ENST00000508466 GOLPH3LQ9H4A5 285 aa8.45□□□□□ -1.06
LIMCH1-207ENST00000508466 LZTFL1Q9NQ48 299 aa8.45□□□□□ -1.06
LIMCH1-207ENST00000508466 ADGRL2O95490 1459 aa8.45□□□□□ -1.06
LIMCH1-207ENST00000508466 MINK1Q8N4C8 1332 aaPredicted RBP8.45□□□□□ -1.06
LIMCH1-207ENST00000508466 CT47B1P0C2W7 299 aaPredicted RBP8.45□□□□□ -1.06
LIMCH1-207ENST00000508466 CCAR1Q8IX12 1150 aaKnown RBP8.45□□□□□ -1.06
LIMCH1-207ENST00000508466 DHX40Q8IX18 779 aaKnown RBP8.45□□□□□ -1.06
LIMCH1-207ENST00000508466 CPLX3Q8WVH0 158 aa8.45□□□□□ -1.06
LIMCH1-207ENST00000508466 DPF2Q92785 391 aa8.45□□□□□ -1.06
LIMCH1-207ENST00000508466 API5Q9BZZ5 524 aaKnown RBP8.45□□□□□ -1.06
LIMCH1-207ENST00000508466 CLSTN2Q9H4D0 955 aa8.45□□□□□ -1.06
LIMCH1-207ENST00000508466 CD248Q9HCU0 757 aa8.45□□□□□ -1.06
LIMCH1-207ENST00000508466 PLEKHG2Q9H7P9 1386 aa8.45□□□□□ -1.06
LIMCH1-207ENST00000508466 ABCC4O15439 1325 aa8.45□□□□□ -1.06
LIMCH1-207ENST00000508466 TADA3O75528 432 aa8.45□□□□□ -1.06
LIMCH1-207ENST00000508466 NEBLO76041 1014 aa8.45□□□□□ -1.06
LIMCH1-207ENST00000508466 SSBP05455 408 aaKnown RBP eCLIP8.45□□□□□ -1.06
LIMCH1-207ENST00000508466 PAX7P23759 505 aa8.45□□□□□ -1.06
LIMCH1-207ENST00000508466 ETF1P62495 437 aaKnown RBP8.45□□□□□ -1.06
LIMCH1-207ENST00000508466 PPP2R3AQ06190 1150 aa8.45□□□□□ -1.06
LIMCH1-207ENST00000508466 RRS1Q15050 365 aaKnown RBP8.45□□□□□ -1.06
LIMCH1-207ENST00000508466 OTUD7BQ6GQQ9 843 aa8.45□□□□□ -1.06
LIMCH1-207ENST00000508466 CNNM3Q8NE01 707 aa8.45□□□□□ -1.06
LIMCH1-207ENST00000508466 DHX58Q96C10 678 aa8.45□□□□□ -1.06
LIMCH1-207ENST00000508466 LRRCC1Q9C099 1032 aa8.45□□□□□ -1.06
LIMCH1-207ENST00000508466 NUP153P49790 1475 aaKnown RBP8.44□□□□□ -1.06
LIMCH1-207ENST00000508466 EIF4E1BA6NMX2 242 aaKnown RBP8.44□□□□□ -1.06
LIMCH1-207ENST00000508466 TMEM232C9JQI7 657 aa8.44□□□□□ -1.06
LIMCH1-207ENST00000508466 HSPA4P34932 840 aa8.44□□□□□ -1.06
LIMCH1-207ENST00000508466 CCT5P48643 541 aa8.44□□□□□ -1.06
LIMCH1-207ENST00000508466 DPCR1Q3MIW9 517 aa8.44□□□□□ -1.06
LIMCH1-207ENST00000508466 NAIF1Q69YI7 327 aaPredicted RBP8.44□□□□□ -1.06
LIMCH1-207ENST00000508466 RPAINQ86UA6 219 aa8.44□□□□□ -1.06
LIMCH1-207ENST00000508466 RAB11FIP4Q86YS3 637 aa8.44□□□□□ -1.06
LIMCH1-207ENST00000508466 SGSM3Q96HU1 749 aa8.44□□□□□ -1.06
LIMCH1-207ENST00000508466 NDUFB9Q9Y6M9 179 aa8.44□□□□□ -1.06
LIMCH1-207ENST00000508466 SURF6O75683 361 aaKnown RBP8.44□□□□□ -1.06
LIMCH1-207ENST00000508466 ADKP55263 362 aaKnown RBP8.44□□□□□ -1.06
LIMCH1-207ENST00000508466 ACTN3Q08043 901 aaPredicted RBP8.44□□□□□ -1.06
LIMCH1-207ENST00000508466 LONRF3Q496Y0 759 aa8.44□□□□□ -1.06
LIMCH1-207ENST00000508466 SLFNL1Q499Z3 407 aa8.44□□□□□ -1.06
LIMCH1-207ENST00000508466 CPLX2Q6PUV4 134 aaKnown RBP8.44□□□□□ -1.06
LIMCH1-207ENST00000508466 L2HGDHQ9H9P8 463 aa8.44□□□□□ -1.06
LIMCH1-207ENST00000508466 ABCB6Q9NP58 842 aa8.44□□□□□ -1.06
LIMCH1-207ENST00000508466 ZBTB12Q9Y330 459 aaPredicted RBP8.44□□□□□ -1.06
LIMCH1-207ENST00000508466 RTL1A6NKG5 1358 aa8.44□□□□□ -1.06
LIMCH1-207ENST00000508466 H3BQV1 296 aa8.43□□□□□ -1.06
LIMCH1-207ENST00000508466 MYO1FO00160 1098 aa8.43□□□□□ -1.06
LIMCH1-207ENST00000508466 FYB1O15117 783 aa8.43□□□□□ -1.06
LIMCH1-207ENST00000508466 MTF1Q14872 753 aa8.43□□□□□ -1.06
LIMCH1-207ENST00000508466 IFFO2Q5TF58 517 aa8.43□□□□□ -1.06
LIMCH1-207ENST00000508466 TTC14Q96N46 770 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms