RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 MAP2P11137 1827 aaKnown RBP5.97□□□□□ -1.45
HMGB3P16-201ENST00000508037 KNDC1Q76NI1 1749 aa5.96□□□□□ -1.45
HMGB3P16-201ENST00000508037 CHMLP26374 656 aa5.96□□□□□ -1.46
HMGB3P16-201ENST00000508037 GTF2F1P35269 517 aaKnown RBP eCLIP5.96□□□□□ -1.46
HMGB3P16-201ENST00000508037 UBE2HP62256 183 aa5.96□□□□□ -1.46
HMGB3P16-201ENST00000508037 ATP8B2P98198 1209 aa5.96□□□□□ -1.46
HMGB3P16-201ENST00000508037 HSP90AB4PQ58FF6 505 aa5.96□□□□□ -1.46
HMGB3P16-201ENST00000508037 SAMD7Q7Z3H4 446 aa5.96□□□□□ -1.46
HMGB3P16-201ENST00000508037 NME9Q86XW9 330 aa5.96□□□□□ -1.46
HMGB3P16-201ENST00000508037 AEBP1Q8IUX7 1158 aa5.96□□□□□ -1.46
HMGB3P16-201ENST00000508037 C16orf71Q8IYS4 520 aaPredicted RBP5.96□□□□□ -1.46
HMGB3P16-201ENST00000508037 PIBF1Q8WXW3 757 aa5.96□□□□□ -1.46
HMGB3P16-201ENST00000508037 MEIS3Q99687 375 aa5.96□□□□□ -1.46
HMGB3P16-201ENST00000508037 CCDC94Q9BW85 323 aaPredicted RBP5.96□□□□□ -1.46
HMGB3P16-201ENST00000508037 HPS5Q9UPZ3 1129 aa5.96□□□□□ -1.46
HMGB3P16-201ENST00000508037 PXDNLA1KZ92 1463 aa5.96□□□□□ -1.46
HMGB3P16-201ENST00000508037 C3orf80F5H4A9 247 aa5.95□□□□□ -1.46
HMGB3P16-201ENST00000508037 TECPR2O15040 1411 aa5.95□□□□□ -1.46
HMGB3P16-201ENST00000508037 SMARCA5O60264 1052 aaPredicted RBP5.95□□□□□ -1.46
HMGB3P16-201ENST00000508037 PPP4CP60510 307 aa5.95□□□□□ -1.46
HMGB3P16-201ENST00000508037 RBM10P98175 930 aaKnown RBP5.95□□□□□ -1.46
HMGB3P16-201ENST00000508037 PKP1Q13835 747 aa5.95□□□□□ -1.46
HMGB3P16-201ENST00000508037 HIC1Q14526 733 aa5.95□□□□□ -1.46
HMGB3P16-201ENST00000508037 NOLC1Q14978 699 aaKnown RBP eCLIP5.95□□□□□ -1.46
HMGB3P16-201ENST00000508037 UTP14CQ5TAP6 766 aaKnown RBP5.95□□□□□ -1.46
HMGB3P16-201ENST00000508037 CCDC30Q5VVM6 783 aa5.95□□□□□ -1.46
HMGB3P16-201ENST00000508037 SPATA31D1Q6ZQQ2 1576 aa5.95□□□□□ -1.46
HMGB3P16-201ENST00000508037 MON2Q7Z3U7 1717 aa5.95□□□□□ -1.46
HMGB3P16-201ENST00000508037 RBM46Q8TBY0 533 aaKnown RBP5.95□□□□□ -1.46
HMGB3P16-201ENST00000508037 OTUD7AQ8TE49 926 aaPredicted RBP5.95□□□□□ -1.46
HMGB3P16-201ENST00000508037 RUFY2Q8WXA3 655 aa5.95□□□□□ -1.46
HMGB3P16-201ENST00000508037 NUDT16Q96DE0 195 aaKnown RBP5.95□□□□□ -1.46
HMGB3P16-201ENST00000508037 ZSCAN31Q96LW9 406 aaPredicted RBP5.95□□□□□ -1.46
HMGB3P16-201ENST00000508037 ANO2Q9NQ90 1003 aa5.95□□□□□ -1.46
HMGB3P16-201ENST00000508037 SH2B1Q9NRF2 756 aaPredicted RBP5.95□□□□□ -1.46
HMGB3P16-201ENST00000508037 WBP1LQ9NX94 342 aa5.95□□□□□ -1.46
HMGB3P16-201ENST00000508037 USP25Q9UHP3 1055 aa5.95□□□□□ -1.46
HMGB3P16-201ENST00000508037 HDAC5Q9UQL6 1122 aa5.95□□□□□ -1.46
HMGB3P16-201ENST00000508037 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.95□□□□□ -1.46
HMGB3P16-201ENST00000508037 ITSN1Q15811 1721 aa5.94□□□□□ -1.46
HMGB3P16-201ENST00000508037 DLG5Q8TDM6 1919 aa5.94□□□□□ -1.46
HMGB3P16-201ENST00000508037 CRB1P82279 1406 aa5.94□□□□□ -1.46
HMGB3P16-201ENST00000508037 APBB1O00213 710 aa5.94□□□□□ -1.46
HMGB3P16-201ENST00000508037 RNF40O75150 1001 aa5.94□□□□□ -1.46
HMGB3P16-201ENST00000508037 ZSCAN22P10073 491 aaPredicted RBP5.94□□□□□ -1.46
HMGB3P16-201ENST00000508037 HSPA4P34932 840 aa5.94□□□□□ -1.46
HMGB3P16-201ENST00000508037 EIF4A2Q14240 407 aaKnown RBP5.94□□□□□ -1.46
HMGB3P16-201ENST00000508037 SULT6B1Q6IMI4 303 aa5.94□□□□□ -1.46
HMGB3P16-201ENST00000508037 SLC4A10Q6U841 1118 aa5.94□□□□□ -1.46
HMGB3P16-201ENST00000508037 USP48Q86UV5 1035 aa5.94□□□□□ -1.46
HMGB3P16-201ENST00000508037 CNTROBQ8N137 903 aa5.94□□□□□ -1.46
HMGB3P16-201ENST00000508037 RNF214Q8ND24 703 aa5.94□□□□□ -1.46
HMGB3P16-201ENST00000508037 NECTIN2Q92692 538 aa5.94□□□□□ -1.46
HMGB3P16-201ENST00000508037 RILPL2Q969X0 211 aa5.94□□□□□ -1.46
HMGB3P16-201ENST00000508037 EYA1Q99502 592 aa5.94□□□□□ -1.46
HMGB3P16-201ENST00000508037 GTPBP4Q9BZE4 634 aaKnown RBP5.94□□□□□ -1.46
HMGB3P16-201ENST00000508037 SPTLC3Q9NUV7 552 aa5.94□□□□□ -1.46
HMGB3P16-201ENST00000508037 TSPYL4Q9UJ04 414 aa5.94□□□□□ -1.46
HMGB3P16-201ENST00000508037 LIMCH1Q9UPQ0 1083 aa5.94□□□□□ -1.46
HMGB3P16-201ENST00000508037 SMC3Q9UQE7 1217 aa5.94□□□□□ -1.46
HMGB3P16-201ENST00000508037 KIF3AQ9Y496 699 aa5.94□□□□□ -1.46
HMGB3P16-201ENST00000508037 A2ML1A8K2U0 1454 aa5.94□□□□□ -1.46
HMGB3P16-201ENST00000508037 MYO5BQ9ULV0 1848 aa5.94□□□□□ -1.46
HMGB3P16-201ENST00000508037 SALL3Q9BXA9 1300 aa5.94□□□□□ -1.46
HMGB3P16-201ENST00000508037 AGLP35573 1532 aa5.94□□□□□ -1.46
HMGB3P16-201ENST00000508037 RICTORQ6R327 1708 aa5.94□□□□□ -1.46
HMGB3P16-201ENST00000508037 RIMBP3CA6NJZ7 1639 aa5.93□□□□□ -1.46
HMGB3P16-201ENST00000508037 RIMBP3BA6NNM3 1639 aa5.93□□□□□ -1.46
HMGB3P16-201ENST00000508037 RIMBP3Q9UFD9 1639 aa5.93□□□□□ -1.46
HMGB3P16-201ENST00000508037 FAM83GA6ND36 823 aa5.93□□□□□ -1.46
HMGB3P16-201ENST00000508037 STX6O43752 255 aa5.93□□□□□ -1.46
HMGB3P16-201ENST00000508037 KDM4AO75164 1064 aa5.93□□□□□ -1.46
HMGB3P16-201ENST00000508037 RAPGEF3O95398 923 aa5.93□□□□□ -1.46
HMGB3P16-201ENST00000508037 ADCY5O95622 1261 aa5.93□□□□□ -1.46
HMGB3P16-201ENST00000508037 CAVIN2O95810 425 aa5.93□□□□□ -1.46
HMGB3P16-201ENST00000508037 UBTFL1P0CB47 393 aaPredicted RBP5.93□□□□□ -1.46
HMGB3P16-201ENST00000508037 CCDC192P0DO97 292 aa5.93□□□□□ -1.46
HMGB3P16-201ENST00000508037 PDCP20941 246 aa5.93□□□□□ -1.46
HMGB3P16-201ENST00000508037 FKBP5Q13451 457 aaPredicted RBP5.93□□□□□ -1.46
HMGB3P16-201ENST00000508037 RRS1Q15050 365 aaKnown RBP5.93□□□□□ -1.46
HMGB3P16-201ENST00000508037 WAPLQ7Z5K2 1190 aa5.93□□□□□ -1.46
HMGB3P16-201ENST00000508037 GPIHBP1Q8IV16 184 aa5.93□□□□□ -1.46
HMGB3P16-201ENST00000508037 GPATCH3Q96I76 525 aa5.93□□□□□ -1.46
HMGB3P16-201ENST00000508037 ADGRG1Q9Y653 693 aa5.93□□□□□ -1.46
HMGB3P16-201ENST00000508037 C3P01024 1663 aa5.93□□□□□ -1.46
HMGB3P16-201ENST00000508037 CPS1P31327 1500 aa5.93□□□□□ -1.46
HMGB3P16-201ENST00000508037 TTC21AQ8NDW8 1320 aa5.93□□□□□ -1.46
HMGB3P16-201ENST00000508037 RAD50Q92878 1312 aa5.93□□□□□ -1.46
HMGB3P16-201ENST00000508037 AKAP12Q02952 1782 aa5.93□□□□□ -1.46
HMGB3P16-201ENST00000508037 RPAP1Q9BWH6 1393 aaPredicted RBP5.93□□□□□ -1.46
HMGB3P16-201ENST00000508037 PLEKHG3A1L390 1219 aa5.92□□□□□ -1.46
HMGB3P16-201ENST00000508037 HIP1O00291 1037 aa5.92□□□□□ -1.46
HMGB3P16-201ENST00000508037 GNPATO15228 680 aa5.92□□□□□ -1.46
HMGB3P16-201ENST00000508037 F13A1P00488 732 aa5.92□□□□□ -1.46
HMGB3P16-201ENST00000508037 OATP04181 439 aa5.92□□□□□ -1.46
HMGB3P16-201ENST00000508037 DNAJB2P25686 324 aa5.92□□□□□ -1.46
HMGB3P16-201ENST00000508037 DCTN1Q14203 1278 aa5.92□□□□□ -1.46
HMGB3P16-201ENST00000508037 SYCP1Q15431 976 aa5.92□□□□□ -1.46
HMGB3P16-201ENST00000508037 SWT1Q5T5J6 900 aaKnown RBP5.92□□□□□ -1.46
HMGB3P16-201ENST00000508037 FOXD4L5Q5VV16 416 aaPredicted RBP5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms