RNA–Protein interactions for RNA: ENST00000506575.1

CLDND1-211, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-211ENST00000506575 ALDH1B1P30837 517 aa20.11■□□□□ 0.81
CLDND1-211ENST00000506575 TCIRG1Q13488 830 aa20.11■□□□□ 0.81
CLDND1-211ENST00000506575 CCDC30Q5VVM6 783 aa20.11■□□□□ 0.81
CLDND1-211ENST00000506575 RNF123Q5XPI4 1314 aa20.1■□□□□ 0.81
CLDND1-211ENST00000506575 FER1L6Q2WGJ9 1857 aa20.1■□□□□ 0.81
CLDND1-211ENST00000506575 NFKBIEO00221 500 aa20.1■□□□□ 0.81
CLDND1-211ENST00000506575 RPGRQ92834 1020 aaKnown RBP20.1■□□□□ 0.81
CLDND1-211ENST00000506575 GOLGA2Q08379 1002 aa20.09■□□□□ 0.81
CLDND1-211ENST00000506575 CRY2Q49AN0 593 aa20.09■□□□□ 0.81
CLDND1-211ENST00000506575 NLRP10Q86W26 655 aa20.09■□□□□ 0.81
CLDND1-211ENST00000506575 WDR63Q8IWG1 891 aa20.09■□□□□ 0.81
CLDND1-211ENST00000506575 C1QTNF8P60827 252 aa20.08■□□□□ 0.81
CLDND1-211ENST00000506575 TSPYL6Q8N831 410 aa20.08■□□□□ 0.81
CLDND1-211ENST00000506575 NLRP3Q96P20 1036 aa20.08■□□□□ 0.81
CLDND1-211ENST00000506575 TRMT112Q9UI30 125 aaKnown RBP20.08■□□□□ 0.81
CLDND1-211ENST00000506575 CCDC93Q567U6 631 aa20.07■□□□□ 0.8
CLDND1-211ENST00000506575 RIC3Q7Z5B4 369 aa20.07■□□□□ 0.8
CLDND1-211ENST00000506575 TAOK3Q9H2K8 898 aa20.07■□□□□ 0.8
CLDND1-211ENST00000506575 PHAXQ9H814 394 aaKnown RBP20.07■□□□□ 0.8
CLDND1-211ENST00000506575 KDM2BQ8NHM5 1336 aa20.06■□□□□ 0.8
CLDND1-211ENST00000506575 ZC3H4Q9UPT8 1303 aaKnown RBP20.06■□□□□ 0.8
CLDND1-211ENST00000506575 TWISTNBQ3B726 338 aaPredicted RBP20.06■□□□□ 0.8
CLDND1-211ENST00000506575 TIAM2Q8IVF5 1701 aa20.06■□□□□ 0.8
CLDND1-211ENST00000506575 RBM17Q96I25 401 aaKnown RBP20.06■□□□□ 0.8
CLDND1-211ENST00000506575 STK31Q9BXU1 1019 aa20.06■□□□□ 0.8
CLDND1-211ENST00000506575 LTBP3Q9NS15 1303 aa20.05■□□□□ 0.8
CLDND1-211ENST00000506575 FANCIQ9NVI1 1328 aa20.05■□□□□ 0.8
CLDND1-211ENST00000506575 DDX58O95786 925 aaKnown RBP20.05■□□□□ 0.8
CLDND1-211ENST00000506575 SLC10A5Q5PT55 438 aa20.05■□□□□ 0.8
CLDND1-211ENST00000506575 C7orf43Q8WVR3 580 aa20.05■□□□□ 0.8
CLDND1-211ENST00000506575 SH3TC1Q8TE82 1336 aa20.04■□□□□ 0.8
CLDND1-211ENST00000506575 DICER1Q9UPY3 1922 aaKnown RBP20.04■□□□□ 0.8
CLDND1-211ENST00000506575 ATP5J2-PTCD1G3V325 749 aa20.04■□□□□ 0.8
CLDND1-211ENST00000506575 HOXA10P31260 410 aaPredicted RBP20.04■□□□□ 0.8
CLDND1-211ENST00000506575 PRELPP51888 382 aa20.04■□□□□ 0.8
CLDND1-211ENST00000506575 RTKN2Q8IZC4 609 aa20.03■□□□□ 0.8
CLDND1-211ENST00000506575 CRAMP1Q96RY5 1269 aa20.03■□□□□ 0.8
CLDND1-211ENST00000506575 ISCA1Q9BUE6 129 aa20.03■□□□□ 0.8
CLDND1-211ENST00000506575 HCLS1P14317 486 aaPredicted RBP20.02■□□□□ 0.8
CLDND1-211ENST00000506575 C3orf67Q6ZVT6 689 aa20.02■□□□□ 0.8
CLDND1-211ENST00000506575 ZNF428Q96B54 188 aa20.02■□□□□ 0.8
CLDND1-211ENST00000506575 MYH16Q9H6N6 1097 aa20.02■□□□□ 0.8
CLDND1-211ENST00000506575 LAMB2P55268 1798 aa20.02■□□□□ 0.8
CLDND1-211ENST00000506575 TCERG1O14776 1098 aaKnown RBP20.01■□□□□ 0.79
CLDND1-211ENST00000506575 KIF3CO14782 793 aa20.01■□□□□ 0.79
CLDND1-211ENST00000506575 FKBP4Q02790 459 aaKnown RBP eCLIP20.01■□□□□ 0.79
CLDND1-211ENST00000506575 OLFM4Q6UX06 510 aa20.01■□□□□ 0.79
CLDND1-211ENST00000506575 SYNE4Q8N205 404 aa20.01■□□□□ 0.79
CLDND1-211ENST00000506575 NMRK2Q9NPI5 230 aa20.01■□□□□ 0.79
CLDND1-211ENST00000506575 PPEF1O14829 653 aaPredicted RBP20■□□□□ 0.79
CLDND1-211ENST00000506575 TRIM28Q13263 835 aaKnown RBP20■□□□□ 0.79
CLDND1-211ENST00000506575 CC2D2BQ6DHV5 1058 aa20■□□□□ 0.79
CLDND1-211ENST00000506575 FAM89AQ96GI7 184 aa20■□□□□ 0.79
CLDND1-211ENST00000506575 MYD88Q99836 296 aa20■□□□□ 0.79
CLDND1-211ENST00000506575 TMX4Q9H1E5 349 aaPredicted RBP20■□□□□ 0.79
CLDND1-211ENST00000506575 SLC4A2P04920 1241 aa19.99■□□□□ 0.79
CLDND1-211ENST00000506575 EXOSC9Q06265 439 aaKnown RBP19.99■□□□□ 0.79
CLDND1-211ENST00000506575 DPY19L2Q6NUT2 758 aa19.99■□□□□ 0.79
CLDND1-211ENST00000506575 C16orf71Q8IYS4 520 aaPredicted RBP19.99■□□□□ 0.79
CLDND1-211ENST00000506575 CACNA1FO60840 1977 aa19.99■□□□□ 0.79
CLDND1-211ENST00000506575 GLTPD2A6NH11 291 aa19.98■□□□□ 0.79
CLDND1-211ENST00000506575 GRIPAP1Q4V328 841 aa19.98■□□□□ 0.79
CLDND1-211ENST00000506575 KSR2Q6VAB6 950 aa19.98■□□□□ 0.79
CLDND1-211ENST00000506575 DDX46Q7L014 1031 aaKnown RBP19.98■□□□□ 0.79
CLDND1-211ENST00000506575 METTL22Q9BUU2 404 aaPredicted RBP19.98■□□□□ 0.79
CLDND1-211ENST00000506575 MAP3K2Q9Y2U5 619 aa19.98■□□□□ 0.79
CLDND1-211ENST00000506575 DDX60Q8IY21 1712 aaKnown RBP19.98■□□□□ 0.79
CLDND1-211ENST00000506575 ABCC4O15439 1325 aa19.98■□□□□ 0.79
CLDND1-211ENST00000506575 CCER2I3L3R5 266 aa19.97■□□□□ 0.79
CLDND1-211ENST00000506575 RTL5Q5HYW3 569 aaPredicted RBP19.97■□□□□ 0.79
CLDND1-211ENST00000506575 RRAGCQ9HB90 399 aa19.97■□□□□ 0.79
CLDND1-211ENST00000506575 SPINK5Q9NQ38 1064 aaPredicted RBP19.97■□□□□ 0.79
CLDND1-211ENST00000506575 ZNF277Q9NRM2 450 aaPredicted RBP19.97■□□□□ 0.79
CLDND1-211ENST00000506575 PI4KAP2A4QPH2 592 aa19.96■□□□□ 0.79
CLDND1-211ENST00000506575 HSP90B1P14625 803 aaKnown RBP19.96■□□□□ 0.79
CLDND1-211ENST00000506575 NEXNQ0ZGT2 675 aa19.96■□□□□ 0.79
CLDND1-211ENST00000506575 PI4KAP1Q8N8J0 262 aa19.96■□□□□ 0.79
CLDND1-211ENST00000506575 CCDC191Q8NCU4 936 aa19.96■□□□□ 0.79
CLDND1-211ENST00000506575 PSMD1Q99460 953 aa19.96■□□□□ 0.79
CLDND1-211ENST00000506575 CWC25Q9NXE8 425 aaPredicted RBP19.96■□□□□ 0.79
CLDND1-211ENST00000506575 IRS4O14654 1257 aaPredicted RBP19.95■□□□□ 0.78
CLDND1-211ENST00000506575 VAMP4O75379 141 aa19.95■□□□□ 0.78
CLDND1-211ENST00000506575 BBOX1O75936 387 aa19.95■□□□□ 0.78
CLDND1-211ENST00000506575 TOMM70O94826 608 aa19.95■□□□□ 0.78
CLDND1-211ENST00000506575 ZBTB38Q8NAP3 1195 aaPredicted RBP19.95■□□□□ 0.78
CLDND1-211ENST00000506575 IARSP41252 1262 aaKnown RBP19.94■□□□□ 0.78
CLDND1-211ENST00000506575 FLIIQ13045 1269 aa19.94■□□□□ 0.78
CLDND1-211ENST00000506575 G2E3Q7L622 706 aa19.94■□□□□ 0.78
CLDND1-211ENST00000506575 ATP6V0A2Q9Y487 856 aa19.94■□□□□ 0.78
CLDND1-211ENST00000506575 PCCAP05165 728 aaPredicted RBP19.93■□□□□ 0.78
CLDND1-211ENST00000506575 GRAPQ13588 217 aa19.93■□□□□ 0.78
CLDND1-211ENST00000506575 GRAPLQ8TC17 118 aaPredicted RBP19.93■□□□□ 0.78
CLDND1-211ENST00000506575 ZNF521Q96K83 1311 aa19.93■□□□□ 0.78
CLDND1-211ENST00000506575 SNED1Q8TER0 1413 aa19.93■□□□□ 0.78
CLDND1-211ENST00000506575 VEGFAP15692 232 aaPredicted RBP19.92■□□□□ 0.78
CLDND1-211ENST00000506575 FKBP5Q13451 457 aaPredicted RBP19.92■□□□□ 0.78
CLDND1-211ENST00000506575 SF3B3Q15393 1217 aaKnown RBP19.92■□□□□ 0.78
CLDND1-211ENST00000506575 JDP2Q8WYK2 163 aa19.92■□□□□ 0.78
CLDND1-211ENST00000506575 TAF1P21675 1872 aa19.92■□□□□ 0.78
CLDND1-211ENST00000506575 TMC4Q7Z404 712 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms