RNA–Protein interactions for RNA: ENST00000506267.1

HMGB2-204, Transcript of high mobility group box 2, humanhuman

TSL 3

Gene HMGB2, Length 629 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-204ENST00000506267 NFKBIEO00221 500 aa29.09■■■□□ 2.25
HMGB2-204ENST00000506267 C21orf2O43822 256 aa29.09■■■□□ 2.25
HMGB2-204ENST00000506267 RASSF7Q02833 373 aa29.09■■■□□ 2.25
HMGB2-204ENST00000506267 C7orf43Q8WVR3 580 aa29.09■■■□□ 2.25
HMGB2-204ENST00000506267 UTP14AQ9BVJ6 771 aaKnown RBP29.09■■■□□ 2.25
HMGB2-204ENST00000506267 CCER2I3L3R5 266 aa29.08■■■□□ 2.25
HMGB2-204ENST00000506267 TWISTNBQ3B726 338 aaPredicted RBP29.08■■■□□ 2.25
HMGB2-204ENST00000506267 SLC10A5Q5PT55 438 aa29.08■■■□□ 2.25
HMGB2-204ENST00000506267 ISCA1Q9BUE6 129 aa29.08■■■□□ 2.25
HMGB2-204ENST00000506267 ZNF521Q96K83 1311 aa29.08■■■□□ 2.25
HMGB2-204ENST00000506267 C3orf67Q6ZVT6 689 aa29.07■■■□□ 2.24
HMGB2-204ENST00000506267 CHMP4AQ9BY43 222 aa29.07■■■□□ 2.24
HMGB2-204ENST00000506267 ZNF219Q9P2Y4 722 aaPredicted RBP29.07■■■□□ 2.24
HMGB2-204ENST00000506267 RNF123Q5XPI4 1314 aa29.06■■■□□ 2.24
HMGB2-204ENST00000506267 SYNE4Q8N205 404 aa29.05■■■□□ 2.24
HMGB2-204ENST00000506267 CCDC88AQ3V6T2 1871 aa29.05■■■□□ 2.24
HMGB2-204ENST00000506267 HOXA10P31260 410 aaPredicted RBP29.04■■■□□ 2.24
HMGB2-204ENST00000506267 RNF181Q9P0P0 153 aa29.04■■■□□ 2.24
HMGB2-204ENST00000506267 TRIM28Q13263 835 aaKnown RBP29.03■■■□□ 2.24
HMGB2-204ENST00000506267 ATP5J2-PTCD1G3V325 749 aa29.02■■■□□ 2.24
HMGB2-204ENST00000506267 TCERG1O14776 1098 aaKnown RBP29.02■■■□□ 2.24
HMGB2-204ENST00000506267 VAMP4O75379 141 aa29.02■■■□□ 2.24
HMGB2-204ENST00000506267 GOLGA2Q08379 1002 aa29.02■■■□□ 2.24
HMGB2-204ENST00000506267 LAMB2P55268 1798 aa29.01■■■□□ 2.23
HMGB2-204ENST00000506267 LMNB1P20700 586 aa29.01■■■□□ 2.23
HMGB2-204ENST00000506267 ALDH1B1P30837 517 aa29.01■■■□□ 2.23
HMGB2-204ENST00000506267 EXOSC9Q06265 439 aaKnown RBP29.01■■■□□ 2.23
HMGB2-204ENST00000506267 RIC3Q7Z5B4 369 aa29.01■■■□□ 2.23
HMGB2-204ENST00000506267 ZNF526Q8TF50 670 aaPredicted RBP29.01■■■□□ 2.23
HMGB2-204ENST00000506267 TRMT112Q9UI30 125 aaKnown RBP29.01■■■□□ 2.23
HMGB2-204ENST00000506267 LTBP3Q9NS15 1303 aa29■■■□□ 2.23
HMGB2-204ENST00000506267 ZNF428Q96B54 188 aa29■■■□□ 2.23
HMGB2-204ENST00000506267 GPBP1L1Q9HC44 474 aaPredicted RBP29■■■□□ 2.23
HMGB2-204ENST00000506267 SH3TC1Q8TE82 1336 aa28.99■■■□□ 2.23
HMGB2-204ENST00000506267 SOGA3Q5TF21 947 aa28.99■■■□□ 2.23
HMGB2-204ENST00000506267 OLFM4Q6UX06 510 aa28.99■■■□□ 2.23
HMGB2-204ENST00000506267 NLRP3Q96P20 1036 aa28.99■■■□□ 2.23
HMGB2-204ENST00000506267 HCLS1P14317 486 aaPredicted RBP28.98■■■□□ 2.23
HMGB2-204ENST00000506267 G2E3Q7L622 706 aa28.98■■■□□ 2.23
HMGB2-204ENST00000506267 RPGRQ92834 1020 aaKnown RBP28.98■■■□□ 2.23
HMGB2-204ENST00000506267 CRAMP1Q96RY5 1269 aa28.98■■■□□ 2.23
HMGB2-204ENST00000506267 STK31Q9BXU1 1019 aa28.98■■■□□ 2.23
HMGB2-204ENST00000506267 MYH16Q9H6N6 1097 aa28.98■■■□□ 2.23
HMGB2-204ENST00000506267 CACNA1FO60840 1977 aa28.98■■■□□ 2.23
HMGB2-204ENST00000506267 DDX60Q8IY21 1712 aaKnown RBP28.97■■■□□ 2.23
HMGB2-204ENST00000506267 SNED1Q8TER0 1413 aa28.97■■■□□ 2.23
HMGB2-204ENST00000506267 DICER1Q9UPY3 1922 aaKnown RBP28.97■■■□□ 2.23
HMGB2-204ENST00000506267 SLC4A2P04920 1241 aa28.96■■■□□ 2.23
HMGB2-204ENST00000506267 CCDC93Q567U6 631 aa28.96■■■□□ 2.23
HMGB2-204ENST00000506267 METTL22Q9BUU2 404 aaPredicted RBP28.96■■■□□ 2.23
HMGB2-204ENST00000506267 TAOK3Q9H2K8 898 aa28.96■■■□□ 2.23
HMGB2-204ENST00000506267 DDX58O95786 925 aaKnown RBP28.95■■■□□ 2.22
HMGB2-204ENST00000506267 KSR2Q6VAB6 950 aa28.95■■■□□ 2.22
HMGB2-204ENST00000506267 FAM89AQ96GI7 184 aa28.95■■■□□ 2.22
HMGB2-204ENST00000506267 RBM17Q96I25 401 aaKnown RBP28.95■■■□□ 2.22
HMGB2-204ENST00000506267 MYD88Q99836 296 aa28.95■■■□□ 2.22
HMGB2-204ENST00000506267 ZC3H4Q9UPT8 1303 aaKnown RBP28.94■■■□□ 2.22
HMGB2-204ENST00000506267 MAP3K2Q9Y2U5 619 aa28.94■■■□□ 2.22
HMGB2-204ENST00000506267 PI4KAP2A4QPH2 592 aa28.93■■■□□ 2.22
HMGB2-204ENST00000506267 PI4KAP1Q8N8J0 262 aa28.93■■■□□ 2.22
HMGB2-204ENST00000506267 TIAM2Q8IVF5 1701 aa28.93■■■□□ 2.22
HMGB2-204ENST00000506267 DIEXFQ68CQ4 756 aaKnown RBP28.92■■■□□ 2.22
HMGB2-204ENST00000506267 SLC51AQ86UW1 340 aa28.92■■■□□ 2.22
HMGB2-204ENST00000506267 KIF3CO14782 793 aa28.91■■■□□ 2.22
HMGB2-204ENST00000506267 CCDC191Q8NCU4 936 aa28.91■■■□□ 2.22
HMGB2-204ENST00000506267 ABCC4O15439 1325 aa28.91■■■□□ 2.22
HMGB2-204ENST00000506267 C1QTNF8P60827 252 aa28.9■■■□□ 2.22
HMGB2-204ENST00000506267 FKBP4Q02790 459 aaKnown RBP eCLIP28.9■■■□□ 2.22
HMGB2-204ENST00000506267 FLIIQ13045 1269 aa28.9■■■□□ 2.22
HMGB2-204ENST00000506267 RTKN2Q8IZC4 609 aa28.9■■■□□ 2.22
HMGB2-204ENST00000506267 ZBTB38Q8NAP3 1195 aaPredicted RBP28.9■■■□□ 2.22
HMGB2-204ENST00000506267 TAF1P21675 1872 aa28.89■■■□□ 2.22
HMGB2-204ENST00000506267 IGKV5-2P06315 115 aa28.89■■■□□ 2.22
HMGB2-204ENST00000506267 MIER1Q8N108 512 aa28.89■■■□□ 2.22
HMGB2-204ENST00000506267 PPEF1O14829 653 aaPredicted RBP28.88■■■□□ 2.21
HMGB2-204ENST00000506267 SF3B3Q15393 1217 aaKnown RBP28.88■■■□□ 2.21
HMGB2-204ENST00000506267 RTL5Q5HYW3 569 aaPredicted RBP28.88■■■□□ 2.21
HMGB2-204ENST00000506267 CC2D2BQ6DHV5 1058 aa28.88■■■□□ 2.21
HMGB2-204ENST00000506267 NMRK2Q9NPI5 230 aa28.88■■■□□ 2.21
HMGB2-204ENST00000506267 IRS4O14654 1257 aaPredicted RBP28.87■■■□□ 2.21
HMGB2-204ENST00000506267 CWC25Q9NXE8 425 aaPredicted RBP28.87■■■□□ 2.21
HMGB2-204ENST00000506267 PCCAP05165 728 aaPredicted RBP28.86■■■□□ 2.21
HMGB2-204ENST00000506267 SLFN5Q08AF3 891 aa28.86■■■□□ 2.21
HMGB2-204ENST00000506267 E9PSI1 815 aa28.85■■■□□ 2.21
HMGB2-204ENST00000506267 PSMD1Q99460 953 aa28.85■■■□□ 2.21
HMGB2-204ENST00000506267 ZNF277Q9NRM2 450 aaPredicted RBP28.85■■■□□ 2.21
HMGB2-204ENST00000506267 GLTPD2A6NH11 291 aa28.84■■■□□ 2.21
HMGB2-204ENST00000506267 BBOX1O75936 387 aa28.84■■■□□ 2.21
HMGB2-204ENST00000506267 ATP6V0A2Q9Y487 856 aa28.84■■■□□ 2.21
HMGB2-204ENST00000506267 KDM2BQ8NHM5 1336 aa28.84■■■□□ 2.21
HMGB2-204ENST00000506267 GRAPQ13588 217 aa28.83■■■□□ 2.21
HMGB2-204ENST00000506267 DDX46Q7L014 1031 aaKnown RBP28.83■■■□□ 2.21
HMGB2-204ENST00000506267 GRAPLQ8TC17 118 aaPredicted RBP28.83■■■□□ 2.21
HMGB2-204ENST00000506267 JARID2Q92833 1246 aaPredicted RBP28.83■■■□□ 2.21
HMGB2-204ENST00000506267 COL4A1P02462 1669 aa28.83■■■□□ 2.21
HMGB2-204ENST00000506267 NEURL1BA8MQ27 555 aa28.82■■■□□ 2.2
HMGB2-204ENST00000506267 FKBP5Q13451 457 aaPredicted RBP28.82■■■□□ 2.2
HMGB2-204ENST00000506267 CWF19L2Q2TBE0 894 aaKnown RBP28.82■■■□□ 2.2
HMGB2-204ENST00000506267 GRIPAP1Q4V328 841 aa28.82■■■□□ 2.2
HMGB2-204ENST00000506267 CDCA7LQ96GN5 454 aa28.82■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms