RNA–Protein interactions for RNA: ENST00000504045.5

MATR3-208, Transcript of matrin 3, humanhuman

TSL 5

Gene MATR3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-208ENST00000504045 PARP10Q53GL7 1025 aa21.87■■□□□ 1.09
MATR3-208ENST00000504045 HYPKQ9NX55 129 aa21.87■■□□□ 1.09
MATR3-208ENST00000504045 CACNA1FO60840 1977 aa21.87■■□□□ 1.09
MATR3-208ENST00000504045 C3orf67Q6ZVT6 689 aa21.86■■□□□ 1.09
MATR3-208ENST00000504045 PLBD2Q8NHP8 589 aa21.86■■□□□ 1.09
MATR3-208ENST00000504045 PHAXQ9H814 394 aaKnown RBP21.86■■□□□ 1.09
MATR3-208ENST00000504045 IL16Q14005 1332 aa21.86■■□□□ 1.09
MATR3-208ENST00000504045 CRY2Q49AN0 593 aa21.85■■□□□ 1.09
MATR3-208ENST00000504045 HSP90AB3PQ58FF7 597 aa21.85■■□□□ 1.09
MATR3-208ENST00000504045 ANKRD13DQ6ZTN6 518 aa21.85■■□□□ 1.09
MATR3-208ENST00000504045 PPP1R42Q7Z4L9 355 aa21.85■■□□□ 1.09
MATR3-208ENST00000504045 NLRP10Q86W26 655 aa21.85■■□□□ 1.09
MATR3-208ENST00000504045 C7orf43Q8WVR3 580 aa21.85■■□□□ 1.09
MATR3-208ENST00000504045 UTP14AQ9BVJ6 771 aaKnown RBP21.85■■□□□ 1.09
MATR3-208ENST00000504045 OLFM4Q6UX06 510 aa21.84■■□□□ 1.09
MATR3-208ENST00000504045 SYNE4Q8N205 404 aa21.84■■□□□ 1.09
MATR3-208ENST00000504045 FANCIQ9NVI1 1328 aa21.83■■□□□ 1.09
MATR3-208ENST00000504045 SPINK5Q9NQ38 1064 aaPredicted RBP21.83■■□□□ 1.09
MATR3-208ENST00000504045 TCERG1O14776 1098 aaKnown RBP21.82■■□□□ 1.08
MATR3-208ENST00000504045 LMNB1P20700 586 aa21.82■■□□□ 1.08
MATR3-208ENST00000504045 WDR63Q8IWG1 891 aa21.82■■□□□ 1.08
MATR3-208ENST00000504045 ATP5J2-PTCD1G3V325 749 aa21.81■■□□□ 1.08
MATR3-208ENST00000504045 TWISTNBQ3B726 338 aaPredicted RBP21.81■■□□□ 1.08
MATR3-208ENST00000504045 CCDC30Q5VVM6 783 aa21.81■■□□□ 1.08
MATR3-208ENST00000504045 ISCA1Q9BUE6 129 aa21.81■■□□□ 1.08
MATR3-208ENST00000504045 C1QTNF8P60827 252 aa21.8■■□□□ 1.08
MATR3-208ENST00000504045 SLC10A5Q5PT55 438 aa21.8■■□□□ 1.08
MATR3-208ENST00000504045 SLC51AQ86UW1 340 aa21.8■■□□□ 1.08
MATR3-208ENST00000504045 RPGRQ92834 1020 aaKnown RBP21.8■■□□□ 1.08
MATR3-208ENST00000504045 TAOK3Q9H2K8 898 aa21.8■■□□□ 1.08
MATR3-208ENST00000504045 TRMT112Q9UI30 125 aaKnown RBP21.8■■□□□ 1.08
MATR3-208ENST00000504045 KIF3CO14782 793 aa21.79■■□□□ 1.08
MATR3-208ENST00000504045 HCLS1P14317 486 aaPredicted RBP21.79■■□□□ 1.08
MATR3-208ENST00000504045 ALDH1B1P30837 517 aa21.79■■□□□ 1.08
MATR3-208ENST00000504045 HOXA10P31260 410 aaPredicted RBP21.79■■□□□ 1.08
MATR3-208ENST00000504045 RIC3Q7Z5B4 369 aa21.79■■□□□ 1.08
MATR3-208ENST00000504045 NMRK2Q9NPI5 230 aa21.79■■□□□ 1.08
MATR3-208ENST00000504045 RNF123Q5XPI4 1314 aa21.79■■□□□ 1.08
MATR3-208ENST00000504045 LTBP3Q9NS15 1303 aa21.79■■□□□ 1.08
MATR3-208ENST00000504045 SNED1Q8TER0 1413 aa21.78■■□□□ 1.08
MATR3-208ENST00000504045 GOLGA2Q08379 1002 aa21.78■■□□□ 1.08
MATR3-208ENST00000504045 CCDC93Q567U6 631 aa21.78■■□□□ 1.08
MATR3-208ENST00000504045 NLRP3Q96P20 1036 aa21.78■■□□□ 1.08
MATR3-208ENST00000504045 SOGA3Q5TF21 947 aa21.77■■□□□ 1.08
MATR3-208ENST00000504045 SH3TC1Q8TE82 1336 aa21.77■■□□□ 1.08
MATR3-208ENST00000504045 EXOSC9Q06265 439 aaKnown RBP21.76■■□□□ 1.07
MATR3-208ENST00000504045 G2E3Q7L622 706 aa21.75■■□□□ 1.07
MATR3-208ENST00000504045 FAM89AQ96GI7 184 aa21.75■■□□□ 1.07
MATR3-208ENST00000504045 RBM17Q96I25 401 aaKnown RBP21.75■■□□□ 1.07
MATR3-208ENST00000504045 MYD88Q99836 296 aa21.75■■□□□ 1.07
MATR3-208ENST00000504045 ZNF521Q96K83 1311 aa21.75■■□□□ 1.07
MATR3-208ENST00000504045 COL4A1P02462 1669 aa21.75■■□□□ 1.07
MATR3-208ENST00000504045 RTL5Q5HYW3 569 aaPredicted RBP21.75■■□□□ 1.07
MATR3-208ENST00000504045 CRAMP1Q96RY5 1269 aa21.75■■□□□ 1.07
MATR3-208ENST00000504045 STK31Q9BXU1 1019 aa21.75■■□□□ 1.07
MATR3-208ENST00000504045 ZC3H4Q9UPT8 1303 aaKnown RBP21.75■■□□□ 1.07
MATR3-208ENST00000504045 MYH3P11055 1940 aa21.74■■□□□ 1.07
MATR3-208ENST00000504045 ABCC4O15439 1325 aa21.74■■□□□ 1.07
MATR3-208ENST00000504045 VAMP4O75379 141 aa21.74■■□□□ 1.07
MATR3-208ENST00000504045 TRIM28Q13263 835 aaKnown RBP21.74■■□□□ 1.07
MATR3-208ENST00000504045 CHMP4AQ9BY43 222 aa21.74■■□□□ 1.07
MATR3-208ENST00000504045 MAP3K2Q9Y2U5 619 aa21.73■■□□□ 1.07
MATR3-208ENST00000504045 KDM2BQ8NHM5 1336 aa21.72■■□□□ 1.07
MATR3-208ENST00000504045 PPEF1O14829 653 aaPredicted RBP21.72■■□□□ 1.07
MATR3-208ENST00000504045 SLC4A2P04920 1241 aa21.72■■□□□ 1.07
MATR3-208ENST00000504045 FKBP4Q02790 459 aaKnown RBP eCLIP21.72■■□□□ 1.078e-7■■■□□ 16.6
MATR3-208ENST00000504045 ZNF277Q9NRM2 450 aaPredicted RBP21.72■■□□□ 1.07
MATR3-208ENST00000504045 PI4KAP2A4QPH2 592 aa21.71■■□□□ 1.07
MATR3-208ENST00000504045 DDX58O95786 925 aaKnown RBP21.71■■□□□ 1.07
MATR3-208ENST00000504045 PI4KAP1Q8N8J0 262 aa21.71■■□□□ 1.07
MATR3-208ENST00000504045 METTL22Q9BUU2 404 aaPredicted RBP21.71■■□□□ 1.07
MATR3-208ENST00000504045 WDR90Q96KV7 1748 aa21.71■■□□□ 1.07
MATR3-208ENST00000504045 CCER2I3L3R5 266 aa21.7■■□□□ 1.07
MATR3-208ENST00000504045 KSR2Q6VAB6 950 aa21.7■■□□□ 1.07
MATR3-208ENST00000504045 RTKN2Q8IZC4 609 aa21.7■■□□□ 1.07
MATR3-208ENST00000504045 RRAGCQ9HB90 399 aa21.7■■□□□ 1.07
MATR3-208ENST00000504045 LRRC37AA6NMS7 1700 aa21.7■■□□□ 1.06
MATR3-208ENST00000504045 COL4A5P29400 1685 aa21.7■■□□□ 1.06
MATR3-208ENST00000504045 GLTPD2A6NH11 291 aa21.7■■□□□ 1.06
MATR3-208ENST00000504045 JARID2Q92833 1246 aaPredicted RBP21.7■■□□□ 1.06
MATR3-208ENST00000504045 MYH16Q9H6N6 1097 aa21.7■■□□□ 1.06
MATR3-208ENST00000504045 CEP350Q5VT06 3117 aa21.69■■□□□ 1.06
MATR3-208ENST00000504045 IRS4O14654 1257 aaPredicted RBP21.68■■□□□ 1.06
MATR3-208ENST00000504045 IGKV5-2P06315 115 aa21.68■■□□□ 1.06
MATR3-208ENST00000504045 FLIIQ13045 1269 aa21.67■■□□□ 1.06
MATR3-208ENST00000504045 CC2D2BQ6DHV5 1058 aa21.67■■□□□ 1.06
MATR3-208ENST00000504045 ZBTB38Q8NAP3 1195 aaPredicted RBP21.67■■□□□ 1.06
MATR3-208ENST00000504045 CCDC191Q8NCU4 936 aa21.67■■□□□ 1.06
MATR3-208ENST00000504045 CWC25Q9NXE8 425 aaPredicted RBP21.67■■□□□ 1.06
MATR3-208ENST00000504045 SPEF2Q9C093 1822 aa21.67■■□□□ 1.06
MATR3-208ENST00000504045 IARSP41252 1262 aaKnown RBP21.66■■□□□ 1.06
MATR3-208ENST00000504045 DDX46Q7L014 1031 aaKnown RBP21.66■■□□□ 1.06
MATR3-208ENST00000504045 PSMD1Q99460 953 aa21.66■■□□□ 1.06
MATR3-208ENST00000504045 ATP6V0A2Q9Y487 856 aa21.66■■□□□ 1.06
MATR3-208ENST00000504045 GRAPQ13588 217 aa21.65■■□□□ 1.06
MATR3-208ENST00000504045 SF3B3Q15393 1217 aaKnown RBP21.65■■□□□ 1.06
MATR3-208ENST00000504045 CWF19L2Q2TBE0 894 aaKnown RBP21.65■■□□□ 1.06
MATR3-208ENST00000504045 GRAPLQ8TC17 118 aaPredicted RBP21.65■■□□□ 1.06
MATR3-208ENST00000504045 POTECB2RU33 542 aa21.65■■□□□ 1.06
MATR3-208ENST00000504045 TOMM70O94826 608 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms