RNA–Protein interactions for RNA: ENST00000504015.2

ALYREF-201, Transcript of Aly/REF export factor, humanhuman

TSL 3

Gene ALYREF, Length 254 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALYREF-201ENST00000504015 KDM6AO15550 1401 aaPredicted RBP4.66□□□□□ -1.66
ALYREF-201ENST00000504015 ZBTB7CA1YPR0 619 aa4.66□□□□□ -1.66
ALYREF-201ENST00000504015 ERVV-2B6SEH9 535 aa4.66□□□□□ -1.66
ALYREF-201ENST00000504015 IGKV5-2P06315 115 aa4.66□□□□□ -1.66
ALYREF-201ENST00000504015 HSPA1LP34931 641 aa4.66□□□□□ -1.66
ALYREF-201ENST00000504015 TERF1P54274 439 aa4.66□□□□□ -1.66
ALYREF-201ENST00000504015 UBE2HP62256 183 aa4.66□□□□□ -1.66
ALYREF-201ENST00000504015 CWF19L2Q2TBE0 894 aaKnown RBP4.66□□□□□ -1.66
ALYREF-201ENST00000504015 USPL1Q5W0Q7 1092 aa4.66□□□□□ -1.66
ALYREF-201ENST00000504015 TSHZ3Q63HK5 1081 aa4.66□□□□□ -1.66
ALYREF-201ENST00000504015 LMOD2Q6P5Q4 547 aa4.66□□□□□ -1.66
ALYREF-201ENST00000504015 COPS6Q7L5N1 327 aa4.66□□□□□ -1.66
ALYREF-201ENST00000504015 AACSQ86V21 672 aa4.66□□□□□ -1.66
ALYREF-201ENST00000504015 ZSCAN30Q86W11 494 aa4.66□□□□□ -1.66
ALYREF-201ENST00000504015 NFATC2IPQ8NCF5 419 aa4.66□□□□□ -1.66
ALYREF-201ENST00000504015 PLBD2Q8NHP8 589 aa4.66□□□□□ -1.66
ALYREF-201ENST00000504015 GPT2Q8TD30 523 aa4.66□□□□□ -1.66
ALYREF-201ENST00000504015 KAZALD1Q96I82 304 aa4.66□□□□□ -1.66
ALYREF-201ENST00000504015 SUCLG2Q96I99 432 aa4.66□□□□□ -1.66
ALYREF-201ENST00000504015 PDLIM2Q96JY6 352 aa4.66□□□□□ -1.66
ALYREF-201ENST00000504015 BICC1Q9H694 974 aaKnown RBP4.66□□□□□ -1.66
ALYREF-201ENST00000504015 RRAGDQ9NQL2 400 aaPredicted RBP4.66□□□□□ -1.66
ALYREF-201ENST00000504015 PDRG1Q9NUG6 133 aa4.66□□□□□ -1.66
ALYREF-201ENST00000504015 NLRP2Q9NX02 1062 aa4.66□□□□□ -1.66
ALYREF-201ENST00000504015 FBXO3Q9UK99 471 aa4.66□□□□□ -1.66
ALYREF-201ENST00000504015 SMC3Q9UQE7 1217 aa4.66□□□□□ -1.66
ALYREF-201ENST00000504015 SPEF2Q9C093 1822 aa4.66□□□□□ -1.66
ALYREF-201ENST00000504015 SPATA31A3Q5VYP0 1347 aa4.66□□□□□ -1.66
ALYREF-201ENST00000504015 RPAP1Q9BWH6 1393 aaPredicted RBP4.65□□□□□ -1.66
ALYREF-201ENST00000504015 JCADQ9P266 1359 aa4.65□□□□□ -1.66
ALYREF-201ENST00000504015 UBR2Q8IWV8 1755 aa4.65□□□□□ -1.66
ALYREF-201ENST00000504015 AFDNP55196 1824 aaKnown RBP4.65□□□□□ -1.66
ALYREF-201ENST00000504015 H7C1W4 665 aa4.65□□□□□ -1.67
ALYREF-201ENST00000504015 STX6O43752 255 aa4.65□□□□□ -1.67
ALYREF-201ENST00000504015 HMGB1P09429 215 aaKnown RBP4.65□□□□□ -1.67
ALYREF-201ENST00000504015 CASTP20810 708 aaKnown RBP4.65□□□□□ -1.67
ALYREF-201ENST00000504015 SYT1P21579 422 aa4.65□□□□□ -1.67
ALYREF-201ENST00000504015 MSNP26038 577 aaKnown RBP4.65□□□□□ -1.67
ALYREF-201ENST00000504015 KCNJ4P48050 445 aa4.65□□□□□ -1.67
ALYREF-201ENST00000504015 CABP4P57796 275 aa4.65□□□□□ -1.67
ALYREF-201ENST00000504015 NKX1-1Q15270 411 aaPredicted RBP4.65□□□□□ -1.67
ALYREF-201ENST00000504015 PROSER3Q2NL68 480 aa4.65□□□□□ -1.67
ALYREF-201ENST00000504015 LRRFIP1Q32MZ4 808 aaKnown RBP4.65□□□□□ -1.67
ALYREF-201ENST00000504015 CREB3L3Q68CJ9 461 aa4.65□□□□□ -1.67
ALYREF-201ENST00000504015 BLOC1S2Q6QNY1 142 aa4.65□□□□□ -1.67
ALYREF-201ENST00000504015 LRP10Q7Z4F1 713 aa4.65□□□□□ -1.67
ALYREF-201ENST00000504015 RASEFQ8IZ41 740 aa4.65□□□□□ -1.67
ALYREF-201ENST00000504015 XAGE3Q8WTP9 111 aa4.65□□□□□ -1.67
ALYREF-201ENST00000504015 UPF1Q92900 1129 aaKnown RBP eCLIP4.65□□□□□ -1.67
ALYREF-201ENST00000504015 EAF2Q96CJ1 260 aaPredicted RBP4.65□□□□□ -1.67
ALYREF-201ENST00000504015 RBM33Q96EV2 1170 aaKnown RBP4.65□□□□□ -1.67
ALYREF-201ENST00000504015 JAKMIP1Q96N16 626 aaKnown RBP4.65□□□□□ -1.67
ALYREF-201ENST00000504015 TEX13AQ9BXU3 409 aaPredicted RBP4.65□□□□□ -1.67
ALYREF-201ENST00000504015 UPF3BQ9BZI7 483 aaKnown RBP4.65□□□□□ -1.67
ALYREF-201ENST00000504015 TSPY26PQ9H489 355 aa4.65□□□□□ -1.67
ALYREF-201ENST00000504015 CCDC39Q9UFE4 941 aa4.65□□□□□ -1.67
ALYREF-201ENST00000504015 RBM8AQ9Y5S9 174 aaKnown RBP4.65□□□□□ -1.67
ALYREF-201ENST00000504015 U3KPZ7 1027 aaPredicted RBP4.65□□□□□ -1.67
ALYREF-201ENST00000504015 MEGF6O75095 1541 aa4.65□□□□□ -1.67
ALYREF-201ENST00000504015 ELP1O95163 1332 aa4.65□□□□□ -1.67
ALYREF-201ENST00000504015 PCDH11XQ9BZA7 1347 aa4.65□□□□□ -1.67
ALYREF-201ENST00000504015 PCDH11YQ9BZA8 1340 aa4.65□□□□□ -1.67
ALYREF-201ENST00000504015 MED23Q9ULK4 1368 aa4.65□□□□□ -1.67
ALYREF-201ENST00000504015 PAPPAQ13219 1627 aa4.64□□□□□ -1.67
ALYREF-201ENST00000504015 SLC27A2O14975 620 aa4.64□□□□□ -1.67
ALYREF-201ENST00000504015 ZNF500O60304 480 aaPredicted RBP4.64□□□□□ -1.67
ALYREF-201ENST00000504015 MAP4K4O95819 1239 aaPredicted RBP4.64□□□□□ -1.67
ALYREF-201ENST00000504015 F13A1P00488 732 aa4.64□□□□□ -1.67
ALYREF-201ENST00000504015 ANXA1P04083 346 aa4.64□□□□□ -1.67
ALYREF-201ENST00000504015 CSB-PGBD3P0DP91 1061 aa4.64□□□□□ -1.67
ALYREF-201ENST00000504015 MYL6BP14649 208 aa4.64□□□□□ -1.67
ALYREF-201ENST00000504015 RPS6KB1P23443 525 aa4.64□□□□□ -1.67
ALYREF-201ENST00000504015 RFX5P48382 616 aaPredicted RBP4.64□□□□□ -1.67
ALYREF-201ENST00000504015 PRIM1P49642 420 aaKnown RBP4.64□□□□□ -1.67
ALYREF-201ENST00000504015 ZC3H6P61129 1189 aaKnown RBP4.64□□□□□ -1.67
ALYREF-201ENST00000504015 XPCQ01831 940 aaPredicted RBP4.64□□□□□ -1.67
ALYREF-201ENST00000504015 PTH1RQ03431 593 aa4.64□□□□□ -1.67
ALYREF-201ENST00000504015 PTPN12Q05209 780 aaKnown RBP4.64□□□□□ -1.67
ALYREF-201ENST00000504015 AIMP1Q12904 312 aaKnown RBP4.64□□□□□ -1.67
ALYREF-201ENST00000504015 TNNI3KQ59H18 835 aa4.64□□□□□ -1.67
ALYREF-201ENST00000504015 CCDC183Q5T5S1 534 aa4.64□□□□□ -1.67
ALYREF-201ENST00000504015 USP48Q86UV5 1035 aa4.64□□□□□ -1.67
ALYREF-201ENST00000504015 CCDC191Q8NCU4 936 aa4.64□□□□□ -1.67
ALYREF-201ENST00000504015 RGS22Q8NE09 1264 aa4.64□□□□□ -1.67
ALYREF-201ENST00000504015 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.64□□□□□ -1.67
ALYREF-201ENST00000504015 ZNF496Q96IT1 587 aaPredicted RBP4.64□□□□□ -1.67
ALYREF-201ENST00000504015 MYD88Q99836 296 aa4.64□□□□□ -1.67
ALYREF-201ENST00000504015 HAUS7Q99871 368 aa4.64□□□□□ -1.67
ALYREF-201ENST00000504015 LLPHQ9BRT6 129 aaKnown RBP4.64□□□□□ -1.67
ALYREF-201ENST00000504015 FSD1Q9BTV5 496 aa4.64□□□□□ -1.67
ALYREF-201ENST00000504015 SCAND2PQ9GZW5 306 aaPredicted RBP4.64□□□□□ -1.67
ALYREF-201ENST00000504015 RBSNQ9H1K0 784 aa4.64□□□□□ -1.67
ALYREF-201ENST00000504015 IL25Q9H293 177 aa4.64□□□□□ -1.67
ALYREF-201ENST00000504015 TMEM63CQ9P1W3 806 aa4.64□□□□□ -1.67
ALYREF-201ENST00000504015 NOL7Q9UMY1 257 aaKnown RBP4.64□□□□□ -1.67
ALYREF-201ENST00000504015 PA2G4Q9UQ80 394 aaKnown RBP4.64□□□□□ -1.67
ALYREF-201ENST00000504015 KIF3AQ9Y496 699 aa4.64□□□□□ -1.67
ALYREF-201ENST00000504015 FPGT-TNNI3KV9GXZ4 949 aa4.64□□□□□ -1.67
ALYREF-201ENST00000504015 WDR17Q8IZU2 1322 aa4.64□□□□□ -1.67
ALYREF-201ENST00000504015 LRP5O75197 1615 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms