RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 RXRBP28702 533 aa8.64□□□□□ -1.03
TOPBP1-203ENST00000503464 NEXNQ0ZGT2 675 aa8.64□□□□□ -1.03
TOPBP1-203ENST00000503464 MTX1Q13505 466 aa8.64□□□□□ -1.03
TOPBP1-203ENST00000503464 SMIM5Q71RC9 77 aa8.64□□□□□ -1.03
TOPBP1-203ENST00000503464 SSH3Q8TE77 659 aa8.64□□□□□ -1.03
TOPBP1-203ENST00000503464 JARID2Q92833 1246 aaPredicted RBP8.64□□□□□ -1.03
TOPBP1-203ENST00000503464 LRRC4BQ9NT99 713 aa8.64□□□□□ -1.03
TOPBP1-203ENST00000503464 UBN2Q6ZU65 1347 aa8.63□□□□□ -1.03
TOPBP1-203ENST00000503464 H7C1W4 665 aa8.63□□□□□ -1.03
TOPBP1-203ENST00000503464 TRIM37O94972 964 aa8.63□□□□□ -1.03
TOPBP1-203ENST00000503464 CAMTA2O94983 1202 aa8.63□□□□□ -1.03
TOPBP1-203ENST00000503464 RGS3P49796 1198 aa8.63□□□□□ -1.03
TOPBP1-203ENST00000503464 TCIRG1Q13488 830 aa8.63□□□□□ -1.03
TOPBP1-203ENST00000503464 GIGYF2Q6Y7W6 1299 aaKnown RBP8.63□□□□□ -1.03
TOPBP1-203ENST00000503464 KIF6Q6ZMV9 814 aa8.63□□□□□ -1.03
TOPBP1-203ENST00000503464 UBE3BQ7Z3V4 1068 aa8.63□□□□□ -1.03
TOPBP1-203ENST00000503464 PPP1R42Q7Z4L9 355 aa8.63□□□□□ -1.03
TOPBP1-203ENST00000503464 DZIP3Q86Y13 1208 aaKnown RBP8.63□□□□□ -1.03
TOPBP1-203ENST00000503464 GCC1Q96CN9 775 aa8.63□□□□□ -1.03
TOPBP1-203ENST00000503464 BICC1Q9H694 974 aaKnown RBP8.63□□□□□ -1.03
TOPBP1-203ENST00000503464 TSHZ2Q9NRE2 1034 aa8.63□□□□□ -1.03
TOPBP1-203ENST00000503464 C9orf78Q9NZ63 289 aaPredicted RBP8.63□□□□□ -1.03
TOPBP1-203ENST00000503464 CCNL1Q9UK58 526 aaPredicted RBP8.63□□□□□ -1.03
TOPBP1-203ENST00000503464 TBC1D2BQ9UPU7 963 aa8.63□□□□□ -1.03
TOPBP1-203ENST00000503464 ERVV-1B6SEH8 477 aa8.62□□□□□ -1.03
TOPBP1-203ENST00000503464 TRIM28Q13263 835 aaKnown RBP8.62□□□□□ -1.03
TOPBP1-203ENST00000503464 RABL6Q3YEC7 729 aaPredicted RBP8.62□□□□□ -1.03
TOPBP1-203ENST00000503464 CHD1LQ86WJ1 897 aa8.62□□□□□ -1.03
TOPBP1-203ENST00000503464 PROM2Q8N271 834 aa8.62□□□□□ -1.03
TOPBP1-203ENST00000503464 CWC25Q9NXE8 425 aaPredicted RBP8.62□□□□□ -1.03
TOPBP1-203ENST00000503464 LRP5O75197 1615 aa8.62□□□□□ -1.03
TOPBP1-203ENST00000503464 A0A087WZG4 1122 aa8.61□□□□□ -1.03
TOPBP1-203ENST00000503464 SRGAP3O43295 1099 aa8.61□□□□□ -1.03
TOPBP1-203ENST00000503464 SMARCA5O60264 1052 aaPredicted RBP8.61□□□□□ -1.03
TOPBP1-203ENST00000503464 FOXO4P98177 505 aa8.61□□□□□ -1.03
TOPBP1-203ENST00000503464 RC3H1Q5TC82 1133 aaKnown RBP8.61□□□□□ -1.03
TOPBP1-203ENST00000503464 NLRP10Q86W26 655 aa8.61□□□□□ -1.03
TOPBP1-203ENST00000503464 ZNF34Q8IZ26 560 aa8.61□□□□□ -1.03
TOPBP1-203ENST00000503464 CCDC191Q8NCU4 936 aa8.61□□□□□ -1.03
TOPBP1-203ENST00000503464 OTUD7AQ8TE49 926 aaPredicted RBP8.61□□□□□ -1.03
TOPBP1-203ENST00000503464 LNPKQ9C0E8 428 aa8.61□□□□□ -1.03
TOPBP1-203ENST00000503464 BCL2L12Q9HB09 334 aa8.61□□□□□ -1.03
TOPBP1-203ENST00000503464 EXOC6BQ9Y2D4 811 aa8.61□□□□□ -1.03
TOPBP1-203ENST00000503464 COL4A1P02462 1669 aa8.61□□□□□ -1.03
TOPBP1-203ENST00000503464 SPEF2Q9C093 1822 aa8.61□□□□□ -1.03
TOPBP1-203ENST00000503464 SALL3Q9BXA9 1300 aa8.6□□□□□ -1.03
TOPBP1-203ENST00000503464 TNRC6CQ9HCJ0 1690 aaKnown RBP8.6□□□□□ -1.03
TOPBP1-203ENST00000503464 HMMRO75330 724 aa8.6□□□□□ -1.03
TOPBP1-203ENST00000503464 RPS6KA4O75676 772 aa8.6□□□□□ -1.03
TOPBP1-203ENST00000503464 GPTP24298 496 aa8.6□□□□□ -1.03
TOPBP1-203ENST00000503464 RFX5P48382 616 aaPredicted RBP8.6□□□□□ -1.03
TOPBP1-203ENST00000503464 ANKRD45Q5TZF3 282 aa8.6□□□□□ -1.03
TOPBP1-203ENST00000503464 SYNE4Q8N205 404 aa8.6□□□□□ -1.03
TOPBP1-203ENST00000503464 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.6□□□□□ -1.03
TOPBP1-203ENST00000503464 A0A1B0GUL6 1792 aa8.6□□□□□ -1.03
TOPBP1-203ENST00000503464 GNPATO15228 680 aa8.59□□□□□ -1.03
TOPBP1-203ENST00000503464 PCCAP05165 728 aaPredicted RBP8.59□□□□□ -1.03
TOPBP1-203ENST00000503464 C8orf34Q49A92 452 aa8.59□□□□□ -1.03
TOPBP1-203ENST00000503464 RTL5Q5HYW3 569 aaPredicted RBP8.59□□□□□ -1.03
TOPBP1-203ENST00000503464 C16orf71Q8IYS4 520 aaPredicted RBP8.59□□□□□ -1.03
TOPBP1-203ENST00000503464 PELP1Q8IZL8 1130 aaKnown RBP8.59□□□□□ -1.03
TOPBP1-203ENST00000503464 KLHDC4Q8TBB5 520 aa8.59□□□□□ -1.03
TOPBP1-203ENST00000503464 SRP68Q9UHB9 627 aaKnown RBP8.59□□□□□ -1.03
TOPBP1-203ENST00000503464 PA2G4Q9UQ80 394 aaKnown RBP8.59□□□□□ -1.03
TOPBP1-203ENST00000503464 NOP58Q9Y2X3 529 aaKnown RBP8.59□□□□□ -1.03
TOPBP1-203ENST00000503464 ZBTB12Q9Y330 459 aaPredicted RBP8.59□□□□□ -1.03
TOPBP1-203ENST00000503464 CDHR2Q9BYE9 1310 aa8.58□□□□□ -1.04
TOPBP1-203ENST00000503464 TAF1P21675 1872 aa8.58□□□□□ -1.04
TOPBP1-203ENST00000503464 QSER1Q2KHR3 1735 aa8.58□□□□□ -1.04
TOPBP1-203ENST00000503464 APBB1O00213 710 aa8.58□□□□□ -1.04
TOPBP1-203ENST00000503464 TXNRD1Q16881 649 aa8.58□□□□□ -1.04
TOPBP1-203ENST00000503464 HSP90AB3PQ58FF7 597 aa8.58□□□□□ -1.04
TOPBP1-203ENST00000503464 SLC27A3Q5K4L6 730 aa8.58□□□□□ -1.04
TOPBP1-203ENST00000503464 SUSD4Q5VX71 490 aa8.58□□□□□ -1.04
TOPBP1-203ENST00000503464 PLEKHM2Q8IWE5 1019 aa8.58□□□□□ -1.04
TOPBP1-203ENST00000503464 ZBTB38Q8NAP3 1195 aaPredicted RBP8.58□□□□□ -1.04
TOPBP1-203ENST00000503464 FAM89AQ96GI7 184 aa8.58□□□□□ -1.04
TOPBP1-203ENST00000503464 ARXQ96QS3 562 aa8.58□□□□□ -1.04
TOPBP1-203ENST00000503464 USP42Q9H9J4 1324 aaKnown RBP8.57□□□□□ -1.04
TOPBP1-203ENST00000503464 AK9Q5TCS8 1911 aa8.57□□□□□ -1.04
TOPBP1-203ENST00000503464 PLSCR1O15162 318 aa8.57□□□□□ -1.04
TOPBP1-203ENST00000503464 RGL2O15211 777 aa8.57□□□□□ -1.04
TOPBP1-203ENST00000503464 SURF6O75683 361 aaKnown RBP8.57□□□□□ -1.04
TOPBP1-203ENST00000503464 NTSR2O95665 410 aa8.57□□□□□ -1.04
TOPBP1-203ENST00000503464 ZNF827Q17R98 1081 aa8.57□□□□□ -1.04
TOPBP1-203ENST00000503464 LMBR1LQ6UX01 489 aa8.57□□□□□ -1.04
TOPBP1-203ENST00000503464 ARHGEF1Q92888 912 aaKnown RBP8.57□□□□□ -1.04
TOPBP1-203ENST00000503464 PLA2G12BQ9BX93 195 aa8.57□□□□□ -1.04
TOPBP1-203ENST00000503464 NARFQ9UHQ1 456 aa8.57□□□□□ -1.04
TOPBP1-203ENST00000503464 GABBR2O75899 941 aa8.56□□□□□ -1.04
TOPBP1-203ENST00000503464 SASH1O94885 1247 aa8.56□□□□□ -1.04
TOPBP1-203ENST00000503464 APBA3O96018 575 aa8.56□□□□□ -1.04
TOPBP1-203ENST00000503464 CSF1RP07333 972 aa8.56□□□□□ -1.04
TOPBP1-203ENST00000503464 GSPT1P15170 499 aaKnown RBP8.56□□□□□ -1.04
TOPBP1-203ENST00000503464 PTPN12Q05209 780 aaKnown RBP8.56□□□□□ -1.04
TOPBP1-203ENST00000503464 USPL1Q5W0Q7 1092 aa8.56□□□□□ -1.04
TOPBP1-203ENST00000503464 TBC1D9BQ66K14 1250 aa8.56□□□□□ -1.04
TOPBP1-203ENST00000503464 RHPN1Q8TCX5 695 aa8.56□□□□□ -1.04
TOPBP1-203ENST00000503464 BACH2Q9BYV9 841 aa8.56□□□□□ -1.04
TOPBP1-203ENST00000503464 LRRCC1Q9C099 1032 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms