RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 GRM8O00222 908 aa25.69■■□□□ 1.7
CDC42SE2-206ENST00000503291 SETDB2Q96T68 719 aa25.69■■□□□ 1.7
CDC42SE2-206ENST00000503291 CHMP4BQ9H444 224 aaKnown RBP25.69■■□□□ 1.7
CDC42SE2-206ENST00000503291 ZBTB40Q9NUA8 1239 aa25.69■■□□□ 1.7
CDC42SE2-206ENST00000503291 NBPF7P0C2Y1 421 aaPredicted RBP25.68■■□□□ 1.7
CDC42SE2-206ENST00000503291 PARP10Q53GL7 1025 aa25.68■■□□□ 1.7
CDC42SE2-206ENST00000503291 SUSD4Q5VX71 490 aa25.68■■□□□ 1.7
CDC42SE2-206ENST00000503291 NLGN1Q8N2Q7 840 aa25.68■■□□□ 1.7
CDC42SE2-206ENST00000503291 NFIXQ14938 502 aa25.67■■□□□ 1.7
CDC42SE2-206ENST00000503291 JARID2Q92833 1246 aaPredicted RBP25.67■■□□□ 1.7
CDC42SE2-206ENST00000503291 GNAI3P08754 354 aa25.66■■□□□ 1.7
CDC42SE2-206ENST00000503291 UTYO14607 1347 aa25.66■■□□□ 1.7
CDC42SE2-206ENST00000503291 FAM177BA6PVY3 158 aa25.66■■□□□ 1.7
CDC42SE2-206ENST00000503291 H7C1W4 665 aa25.66■■□□□ 1.7
CDC42SE2-206ENST00000503291 R3HDM1Q15032 1099 aaKnown RBP25.66■■□□□ 1.7
CDC42SE2-206ENST00000503291 RTL5Q5HYW3 569 aaPredicted RBP25.66■■□□□ 1.7
CDC42SE2-206ENST00000503291 UBTFL1P0CB47 393 aaPredicted RBP25.65■■□□□ 1.7
CDC42SE2-206ENST00000503291 TM4SF1P30408 202 aa25.65■■□□□ 1.7
CDC42SE2-206ENST00000503291 UBE3BQ7Z3V4 1068 aa25.65■■□□□ 1.7
CDC42SE2-206ENST00000503291 TRMT112Q9UI30 125 aaKnown RBP25.65■■□□□ 1.7
CDC42SE2-206ENST00000503291 PPP1R42Q7Z4L9 355 aa25.64■■□□□ 1.7
CDC42SE2-206ENST00000503291 ZBTB38Q8NAP3 1195 aaPredicted RBP25.64■■□□□ 1.7
CDC42SE2-206ENST00000503291 FAM89AQ96GI7 184 aa25.64■■□□□ 1.7
CDC42SE2-206ENST00000503291 UTP14AQ9BVJ6 771 aaKnown RBP25.64■■□□□ 1.69
CDC42SE2-206ENST00000503291 PCCAP05165 728 aaPredicted RBP25.63■■□□□ 1.69
CDC42SE2-206ENST00000503291 MSL1Q68DK7 614 aa25.63■■□□□ 1.69
CDC42SE2-206ENST00000503291 CASP7P55210 303 aa25.63■■□□□ 1.69
CDC42SE2-206ENST00000503291 AAMPQ13685 434 aa25.63■■□□□ 1.69
CDC42SE2-206ENST00000503291 C1orf115Q9H7X2 142 aa25.63■■□□□ 1.69
CDC42SE2-206ENST00000503291 SYNE4Q8N205 404 aa25.62■■□□□ 1.69
CDC42SE2-206ENST00000503291 SLC16A10Q8TF71 515 aa25.62■■□□□ 1.69
CDC42SE2-206ENST00000503291 NTSR2O95665 410 aa25.61■■□□□ 1.69
CDC42SE2-206ENST00000503291 GNAI2P04899 355 aa25.61■■□□□ 1.69
CDC42SE2-206ENST00000503291 ERICH6BQ5W0A0 696 aa25.61■■□□□ 1.69
CDC42SE2-206ENST00000503291 CARMIL3Q8ND23 1372 aa25.61■■□□□ 1.69
CDC42SE2-206ENST00000503291 NBPF5PQ86XG9 351 aaPredicted RBP25.6■■□□□ 1.69
CDC42SE2-206ENST00000503291 LRRFIP2Q9Y608 721 aaKnown RBP25.6■■□□□ 1.69
CDC42SE2-206ENST00000503291 PSDA5PKW4 1024 aaPredicted RBP25.59■■□□□ 1.69
CDC42SE2-206ENST00000503291 TPTE2Q6XPS3 522 aa25.59■■□□□ 1.69
CDC42SE2-206ENST00000503291 NUTM1Q86Y26 1132 aa25.59■■□□□ 1.69
CDC42SE2-206ENST00000503291 SUCLG2Q96I99 432 aa25.59■■□□□ 1.69
CDC42SE2-206ENST00000503291 NYXQ9GZU5 481 aa25.59■■□□□ 1.69
CDC42SE2-206ENST00000503291 HDAC5Q9UQL6 1122 aa25.59■■□□□ 1.69
CDC42SE2-206ENST00000503291 SH3TC1Q8TE82 1336 aa25.59■■□□□ 1.69
CDC42SE2-206ENST00000503291 DDR1Q08345 913 aa25.59■■□□□ 1.69
CDC42SE2-206ENST00000503291 GTF3C3Q9Y5Q9 886 aa25.59■■□□□ 1.69
CDC42SE2-206ENST00000503291 MMP10P09238 476 aa25.58■■□□□ 1.69
CDC42SE2-206ENST00000503291 KAZALD1Q96I82 304 aa25.58■■□□□ 1.69
CDC42SE2-206ENST00000503291 COL24A1Q17RW2 1714 aa25.58■■□□□ 1.69
CDC42SE2-206ENST00000503291 POLRMTO00411 1230 aaKnown RBP25.58■■□□□ 1.68
CDC42SE2-206ENST00000503291 SERPINB2P05120 415 aa25.58■■□□□ 1.68
CDC42SE2-206ENST00000503291 GTF2E1P29083 439 aaPredicted RBP25.58■■□□□ 1.68
CDC42SE2-206ENST00000503291 PCDHB15Q9Y5E8 787 aa25.57■■□□□ 1.68
CDC42SE2-206ENST00000503291 CDHR2Q9BYE9 1310 aa25.57■■□□□ 1.68
CDC42SE2-206ENST00000503291 IRS4O14654 1257 aaPredicted RBP25.56■■□□□ 1.68
CDC42SE2-206ENST00000503291 ERFEQ4G0M1 354 aa25.56■■□□□ 1.68
CDC42SE2-206ENST00000503291 NPHP1O15259 732 aa25.55■■□□□ 1.68
CDC42SE2-206ENST00000503291 EPHA10Q5JZY3 1008 aa25.55■■□□□ 1.68
CDC42SE2-206ENST00000503291 ZBTB7AO95365 584 aa25.54■■□□□ 1.68
CDC42SE2-206ENST00000503291 CNBD1Q8NA66 436 aa25.54■■□□□ 1.68
CDC42SE2-206ENST00000503291 BICC1Q9H694 974 aaKnown RBP25.54■■□□□ 1.68
CDC42SE2-206ENST00000503291 PARP3Q9Y6F1 533 aa25.54■■□□□ 1.68
CDC42SE2-206ENST00000503291 CASZ1Q86V15 1759 aa25.54■■□□□ 1.68
CDC42SE2-206ENST00000503291 SOCS7O14512 581 aa25.54■■□□□ 1.68
CDC42SE2-206ENST00000503291 HCLS1P14317 486 aaPredicted RBP25.54■■□□□ 1.68
CDC42SE2-206ENST00000503291 PRR5LQ6MZQ0 368 aa25.53■■□□□ 1.68
CDC42SE2-206ENST00000503291 CCDC24Q8N4L8 307 aa25.53■■□□□ 1.68
CDC42SE2-206ENST00000503291 PLA2G12BQ9BX93 195 aa25.53■■□□□ 1.68
CDC42SE2-206ENST00000503291 FOXO4P98177 505 aa25.53■■□□□ 1.68
CDC42SE2-206ENST00000503291 SLC10A5Q5PT55 438 aa25.52■■□□□ 1.68
CDC42SE2-206ENST00000503291 CEP85Q6P2H3 762 aa25.52■■□□□ 1.68
CDC42SE2-206ENST00000503291 MTFR1LQ9H019 292 aa25.52■■□□□ 1.68
CDC42SE2-206ENST00000503291 PDE8AO60658 829 aa25.51■■□□□ 1.67
CDC42SE2-206ENST00000503291 RPAP2Q8IXW5 612 aaPredicted RBP25.51■■□□□ 1.67
CDC42SE2-206ENST00000503291 ANKRD44Q8N8A2 993 aa25.51■■□□□ 1.67
CDC42SE2-206ENST00000503291 HSP90B1P14625 803 aaKnown RBP25.51■■□□□ 1.67
CDC42SE2-206ENST00000503291 SIRT2Q8IXJ6 389 aa25.5■■□□□ 1.67
CDC42SE2-206ENST00000503291 ATF5Q9Y2D1 282 aaPredicted RBP25.5■■□□□ 1.67
CDC42SE2-206ENST00000503291 ABCC12Q96J65 1359 aa25.5■■□□□ 1.67
CDC42SE2-206ENST00000503291 ATP8B2P98198 1209 aa25.49■■□□□ 1.67
CDC42SE2-206ENST00000503291 RABL6Q3YEC7 729 aaPredicted RBP25.49■■□□□ 1.67
CDC42SE2-206ENST00000503291 LMBR1LQ6UX01 489 aa25.49■■□□□ 1.67
CDC42SE2-206ENST00000503291 PPP4R2Q9NY27 417 aa25.49■■□□□ 1.67
CDC42SE2-206ENST00000503291 ST5P78524 1137 aa25.48■■□□□ 1.67
CDC42SE2-206ENST00000503291 PNMA6EA0A0J9YXQ4 647 aa25.47■■□□□ 1.67
CDC42SE2-206ENST00000503291 MTX1Q13505 466 aa25.47■■□□□ 1.67
CDC42SE2-206ENST00000503291 DDX60Q8IY21 1712 aaKnown RBP25.47■■□□□ 1.67
CDC42SE2-206ENST00000503291 CSF1RP07333 972 aa25.47■■□□□ 1.67
CDC42SE2-206ENST00000503291 CTSWP56202 376 aa25.47■■□□□ 1.67
CDC42SE2-206ENST00000503291 TTLL11Q8NHH1 800 aa25.47■■□□□ 1.67
CDC42SE2-206ENST00000503291 SRGAP3O43295 1099 aa25.46■■□□□ 1.67
CDC42SE2-206ENST00000503291 NLRP3Q96P20 1036 aa25.46■■□□□ 1.67
CDC42SE2-206ENST00000503291 NRXN2Q9P2S2 1712 aa25.46■■□□□ 1.67
CDC42SE2-206ENST00000503291 CCDC85AQ96PX6 553 aaPredicted RBP25.46■■□□□ 1.67
CDC42SE2-206ENST00000503291 CHMP3Q9Y3E7 222 aa25.46■■□□□ 1.67
CDC42SE2-206ENST00000503291 C3orf67Q6ZVT6 689 aa25.45■■□□□ 1.66
CDC42SE2-206ENST00000503291 CCDC136Q96JN2 1154 aa25.45■■□□□ 1.66
CDC42SE2-206ENST00000503291 B4GALNT3Q6L9W6 998 aa25.44■■□□□ 1.66
CDC42SE2-206ENST00000503291 MYH3P11055 1940 aa25.43■■□□□ 1.66
CDC42SE2-206ENST00000503291 LAMB2P55268 1798 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms