RNA–Protein interactions for RNA: ENST00000498187.6

NKX2-1-202, Transcript of NK2 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-1, Length 2,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-202ENST00000498187 DDX58O95786 925 aaKnown RBP23.58■■□□□ 1.36
NKX2-1-202ENST00000498187 DNTTIP2Q5QJE6 756 aaKnown RBP23.58■■□□□ 1.36
NKX2-1-202ENST00000498187 PIBF1Q8WXW3 757 aa23.58■■□□□ 1.36
NKX2-1-202ENST00000498187 KCNB2Q92953 911 aa23.58■■□□□ 1.36
NKX2-1-202ENST00000498187 ZSWIM6Q9HCJ5 1215 aa23.58■■□□□ 1.36
NKX2-1-202ENST00000498187 DDX21Q9NR30 783 aaKnown RBP eCLIP23.58■■□□□ 1.36
NKX2-1-202ENST00000498187 UTYO14607 1347 aa23.57■■□□□ 1.36
NKX2-1-202ENST00000498187 CCDC171Q6TFL3 1326 aa23.57■■□□□ 1.36
NKX2-1-202ENST00000498187 TM6SF1Q9BZW5 370 aa23.57■■□□□ 1.36
NKX2-1-202ENST00000498187 USP25Q9UHP3 1055 aa23.57■■□□□ 1.36
NKX2-1-202ENST00000498187 CYP46A1Q9Y6A2 500 aa23.57■■□□□ 1.36
NKX2-1-202ENST00000498187 G3BP1Q13283 466 aaKnown RBP eCLIP23.56■■□□□ 1.36
NKX2-1-202ENST00000498187 EAF2Q96CJ1 260 aaPredicted RBP23.56■■□□□ 1.36
NKX2-1-202ENST00000498187 NECTIN1Q15223 517 aa23.56■■□□□ 1.36
NKX2-1-202ENST00000498187 ADCY5O95622 1261 aa23.55■■□□□ 1.36
NKX2-1-202ENST00000498187 GJB2P29033 226 aa23.55■■□□□ 1.36
NKX2-1-202ENST00000498187 TPRNQ4KMQ1 711 aa23.55■■□□□ 1.36
NKX2-1-202ENST00000498187 PRIMPOLQ96LW4 560 aa23.55■■□□□ 1.36
NKX2-1-202ENST00000498187 CCDC8Q9H0W5 538 aaPredicted RBP23.55■■□□□ 1.36
NKX2-1-202ENST00000498187 RGPD5Q99666 1765 aa23.55■■□□□ 1.36
NKX2-1-202ENST00000498187 PDIA6Q15084 440 aa23.55■■□□□ 1.36
NKX2-1-202ENST00000498187 MYRIPQ8NFW9 859 aa23.55■■□□□ 1.36
NKX2-1-202ENST00000498187 ZSCAN31Q96LW9 406 aaPredicted RBP23.55■■□□□ 1.36
NKX2-1-202ENST00000498187 FAM227BQ96M60 508 aa23.55■■□□□ 1.36
NKX2-1-202ENST00000498187 RBM8AQ9Y5S9 174 aaKnown RBP23.55■■□□□ 1.36
NKX2-1-202ENST00000498187 ADAMTS7Q9UKP4 1686 aa23.55■■□□□ 1.36
NKX2-1-202ENST00000498187 DTNBO60941 627 aa23.54■■□□□ 1.36
NKX2-1-202ENST00000498187 HMGN5P82970 282 aaKnown RBP23.54■■□□□ 1.36
NKX2-1-202ENST00000498187 NMIQ13287 307 aaPredicted RBP23.54■■□□□ 1.36
NKX2-1-202ENST00000498187 DDX54Q8TDD1 881 aaKnown RBP23.54■■□□□ 1.36
NKX2-1-202ENST00000498187 SH2B1Q9NRF2 756 aaPredicted RBP23.54■■□□□ 1.36
NKX2-1-202ENST00000498187 FIBPO43427 364 aa23.54■■□□□ 1.36
NKX2-1-202ENST00000498187 ZKSCAN1P17029 563 aaPredicted RBP23.54■■□□□ 1.36
NKX2-1-202ENST00000498187 NOLC1Q14978 699 aaKnown RBP eCLIP23.54■■□□□ 1.36
NKX2-1-202ENST00000498187 HCLS1P14317 486 aaPredicted RBP23.53■■□□□ 1.36
NKX2-1-202ENST00000498187 TLR7Q9NYK1 1049 aaKnown RBP23.53■■□□□ 1.36
NKX2-1-202ENST00000498187 KIF1AQ12756 1690 aa23.53■■□□□ 1.36
NKX2-1-202ENST00000498187 HIP1O00291 1037 aa23.53■■□□□ 1.36
NKX2-1-202ENST00000498187 IGKV5-2P06315 115 aa23.53■■□□□ 1.36
NKX2-1-202ENST00000498187 KCNJ4P48050 445 aa23.53■■□□□ 1.36
NKX2-1-202ENST00000498187 CREB3L3Q68CJ9 461 aa23.53■■□□□ 1.36
NKX2-1-202ENST00000498187 RIC3Q7Z5B4 369 aa23.53■■□□□ 1.36
NKX2-1-202ENST00000498187 SIL1Q9H173 461 aa23.53■■□□□ 1.36
NKX2-1-202ENST00000498187 TRPM3Q9HCF6 1732 aaPredicted RBP23.53■■□□□ 1.36
NKX2-1-202ENST00000498187 ST3GAL1Q11201 340 aa23.52■■□□□ 1.36
NKX2-1-202ENST00000498187 MTMR6Q9Y217 621 aa23.52■■□□□ 1.36
NKX2-1-202ENST00000498187 MST1RQ04912 1400 aa23.52■■□□□ 1.36
NKX2-1-202ENST00000498187 KDM4AO75164 1064 aa23.51■■□□□ 1.35
NKX2-1-202ENST00000498187 SLC39A6Q13433 755 aa23.51■■□□□ 1.35
NKX2-1-202ENST00000498187 ME3Q16798 604 aa23.51■■□□□ 1.35
NKX2-1-202ENST00000498187 MAP4K1Q92918 833 aa23.51■■□□□ 1.35
NKX2-1-202ENST00000498187 C5P01031 1676 aa23.51■■□□□ 1.35
NKX2-1-202ENST00000498187 LMTK3Q96Q04 1460 aa23.51■■□□□ 1.35
NKX2-1-202ENST00000498187 BOLA2Q9H3K6 86 aa23.5■■□□□ 1.35
NKX2-1-202ENST00000498187 ZNF790Q6PG37 636 aa23.5■■□□□ 1.35
NKX2-1-202ENST00000498187 LARP1Q6PKG0 1096 aaKnown RBP23.5■■□□□ 1.35
NKX2-1-202ENST00000498187 KLHDC4Q8TBB5 520 aa23.5■■□□□ 1.35
NKX2-1-202ENST00000498187 ZNF830Q96NB3 372 aaPredicted RBP23.5■■□□□ 1.35
NKX2-1-202ENST00000498187 MYL6BP14649 208 aa23.49■■□□□ 1.35
NKX2-1-202ENST00000498187 ERBB3P21860 1342 aa23.49■■□□□ 1.35
NKX2-1-202ENST00000498187 KRT28Q7Z3Y7 464 aa23.49■■□□□ 1.35
NKX2-1-202ENST00000498187 NECAB1Q8N987 351 aa23.49■■□□□ 1.35
NKX2-1-202ENST00000498187 FSD1Q9BTV5 496 aa23.49■■□□□ 1.35
NKX2-1-202ENST00000498187 A0A0D9SFI3 127 aa23.49■■□□□ 1.35
NKX2-1-202ENST00000498187 SLC27A2O14975 620 aa23.49■■□□□ 1.35
NKX2-1-202ENST00000498187 DNM1Q05193 864 aaKnown RBP23.49■■□□□ 1.35
NKX2-1-202ENST00000498187 SNRKQ9NRH2 765 aa23.49■■□□□ 1.35
NKX2-1-202ENST00000498187 NEURL1BA8MQ27 555 aa23.48■■□□□ 1.35
NKX2-1-202ENST00000498187 NEXNQ0ZGT2 675 aa23.48■■□□□ 1.35
NKX2-1-202ENST00000498187 TTC12Q9H892 705 aaPredicted RBP23.48■■□□□ 1.35
NKX2-1-202ENST00000498187 TPCN1Q9ULQ1 816 aa23.48■■□□□ 1.35
NKX2-1-202ENST00000498187 SCN11AQ9UI33 1791 aa23.47■■□□□ 1.35
NKX2-1-202ENST00000498187 VPS37CA5D8V6 355 aaPredicted RBP23.47■■□□□ 1.35
NKX2-1-202ENST00000498187 MPNDQ8N594 471 aa23.47■■□□□ 1.35
NKX2-1-202ENST00000498187 XAGE3Q8WTP9 111 aa23.47■■□□□ 1.35
NKX2-1-202ENST00000498187 FUCA2Q9BTY2 467 aa23.47■■□□□ 1.35
NKX2-1-202ENST00000498187 SLC52A2Q9HAB3 445 aa23.47■■□□□ 1.35
NKX2-1-202ENST00000498187 SPTLC3Q9NUV7 552 aa23.47■■□□□ 1.35
NKX2-1-202ENST00000498187 TPM3P06753 285 aa23.47■■□□□ 1.35
NKX2-1-202ENST00000498187 PSMA5P28066 241 aa23.47■■□□□ 1.35
NKX2-1-202ENST00000498187 ZC3H6P61129 1189 aaKnown RBP23.47■■□□□ 1.35
NKX2-1-202ENST00000498187 COL9A3Q14050 684 aaPredicted RBP23.47■■□□□ 1.35
NKX2-1-202ENST00000498187 KDM6AO15550 1401 aaPredicted RBP23.46■■□□□ 1.35
NKX2-1-202ENST00000498187 GTF2F1P35269 517 aaKnown RBP eCLIP23.46■■□□□ 1.35
NKX2-1-202ENST00000498187 GCKRQ14397 625 aa23.46■■□□□ 1.35
NKX2-1-202ENST00000498187 RAPGEF4Q8WZA2 1011 aa23.46■■□□□ 1.35
NKX2-1-202ENST00000498187 MYD88Q99836 296 aa23.46■■□□□ 1.35
NKX2-1-202ENST00000498187 NPHP3Q7Z494 1330 aa23.46■■□□□ 1.35
NKX2-1-202ENST00000498187 PDIA4P13667 645 aaKnown RBP23.45■■□□□ 1.35
NKX2-1-202ENST00000498187 EPHA10Q5JZY3 1008 aa23.45■■□□□ 1.35
NKX2-1-202ENST00000498187 MRC1P22897 1456 aa23.45■■□□□ 1.34
NKX2-1-202ENST00000498187 GIMAP6Q6P9H5 292 aa23.45■■□□□ 1.34
NKX2-1-202ENST00000498187 COPS6Q7L5N1 327 aa23.45■■□□□ 1.34
NKX2-1-202ENST00000498187 PROSER2Q86WR7 435 aaPredicted RBP23.45■■□□□ 1.34
NKX2-1-202ENST00000498187 C19orf44Q9H6X5 657 aa23.45■■□□□ 1.34
NKX2-1-202ENST00000498187 MED23Q9ULK4 1368 aa23.45■■□□□ 1.34
NKX2-1-202ENST00000498187 C1orf167Q5SNV9 1468 aa23.45■■□□□ 1.34
NKX2-1-202ENST00000498187 NFATC2IPQ8NCF5 419 aa23.44■■□□□ 1.34
NKX2-1-202ENST00000498187 METTL22Q9BUU2 404 aaPredicted RBP23.44■■□□□ 1.34
NKX2-1-202ENST00000498187 RNF20Q5VTR2 975 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms