RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 PRR29P0C7W0 189 aa9.99□□□□□ -0.81
PDZRN3-212ENST00000498048 MTX1Q13505 466 aa9.99□□□□□ -0.81
PDZRN3-212ENST00000498048 GCKRQ14397 625 aa9.99□□□□□ -0.81
PDZRN3-212ENST00000498048 TTLL7Q6ZT98 887 aa9.99□□□□□ -0.81
PDZRN3-212ENST00000498048 KLHL34Q8N239 644 aa9.99□□□□□ -0.81
PDZRN3-212ENST00000498048 ZBTB3Q9H5J0 574 aa9.99□□□□□ -0.81
PDZRN3-212ENST00000498048 UPF2Q9HAU5 1272 aaKnown RBP9.99□□□□□ -0.81
PDZRN3-212ENST00000498048 MYO5AQ9Y4I1 1855 aaKnown RBP9.99□□□□□ -0.81
PDZRN3-212ENST00000498048 TAF1P21675 1872 aa9.98□□□□□ -0.81
PDZRN3-212ENST00000498048 CHD4Q14839 1912 aa9.98□□□□□ -0.81
PDZRN3-212ENST00000498048 OS9Q13438 667 aaPredicted RBP9.98□□□□□ -0.81
PDZRN3-212ENST00000498048 TTC22Q5TAA0 569 aa9.98□□□□□ -0.81
PDZRN3-212ENST00000498048 UBE3BQ7Z3V4 1068 aa9.98□□□□□ -0.81
PDZRN3-212ENST00000498048 PLEKHM2Q8IWE5 1019 aa9.98□□□□□ -0.81
PDZRN3-212ENST00000498048 BICC1Q9H694 974 aaKnown RBP9.98□□□□□ -0.81
PDZRN3-212ENST00000498048 RTN4Q9NQC3 1192 aaKnown RBP9.98□□□□□ -0.81
PDZRN3-212ENST00000498048 ZBTB1Q9Y2K1 713 aa9.98□□□□□ -0.81
PDZRN3-212ENST00000498048 CACNA1SQ13698 1873 aa9.98□□□□□ -0.81
PDZRN3-212ENST00000498048 ATP5J2-PTCD1G3V325 749 aa9.97□□□□□ -0.81
PDZRN3-212ENST00000498048 RAB11FIP3O75154 756 aa9.97□□□□□ -0.81
PDZRN3-212ENST00000498048 GSPT1P15170 499 aaKnown RBP9.97□□□□□ -0.81
PDZRN3-212ENST00000498048 HSP90AB4PQ58FF6 505 aa9.97□□□□□ -0.81
PDZRN3-212ENST00000498048 OTUD7AQ8TE49 926 aaPredicted RBP9.97□□□□□ -0.81
PDZRN3-212ENST00000498048 SMARCC1Q92922 1105 aaPredicted RBP9.97□□□□□ -0.81
PDZRN3-212ENST00000498048 SLC4A9Q96Q91 983 aa9.97□□□□□ -0.81
PDZRN3-212ENST00000498048 CWC25Q9NXE8 425 aaPredicted RBP9.97□□□□□ -0.81
PDZRN3-212ENST00000498048 DOCK2Q92608 1830 aa9.97□□□□□ -0.81
PDZRN3-212ENST00000498048 AOX1Q06278 1338 aa9.97□□□□□ -0.81
PDZRN3-212ENST00000498048 MAP3K15Q6ZN16 1313 aa9.97□□□□□ -0.81
PDZRN3-212ENST00000498048 TNRC6CQ9HCJ0 1690 aaKnown RBP9.96□□□□□ -0.81
PDZRN3-212ENST00000498048 A0A087WZG4 1122 aa9.96□□□□□ -0.82
PDZRN3-212ENST00000498048 CDC45O75419 566 aa9.96□□□□□ -0.82
PDZRN3-212ENST00000498048 SURF6O75683 361 aaKnown RBP9.96□□□□□ -0.82
PDZRN3-212ENST00000498048 CYP19A1P11511 503 aaPredicted RBP9.96□□□□□ -0.82
PDZRN3-212ENST00000498048 MX1P20591 662 aa9.96□□□□□ -0.82
PDZRN3-212ENST00000498048 KIF1BPQ96EK5 621 aa9.96□□□□□ -0.82
PDZRN3-212ENST00000498048 DDRGK1Q96HY6 314 aa9.96□□□□□ -0.82
PDZRN3-212ENST00000498048 SALL3Q9BXA9 1300 aa9.96□□□□□ -0.82
PDZRN3-212ENST00000498048 LAMA4Q16363 1823 aa9.96□□□□□ -0.82
PDZRN3-212ENST00000498048 LOC102724428A0A0B4J2F2 783 aa9.95□□□□□ -0.82
PDZRN3-212ENST00000498048 MFAP1P55081 439 aaKnown RBP9.95□□□□□ -0.82
PDZRN3-212ENST00000498048 SIK1P57059 783 aa9.95□□□□□ -0.82
PDZRN3-212ENST00000498048 ERC1Q8IUD2 1116 aa9.95□□□□□ -0.82
PDZRN3-212ENST00000498048 CCDC191Q8NCU4 936 aa9.95□□□□□ -0.82
PDZRN3-212ENST00000498048 KAZALD1Q96I82 304 aa9.95□□□□□ -0.82
PDZRN3-212ENST00000498048 CCDC87Q9NVE4 849 aa9.95□□□□□ -0.82
PDZRN3-212ENST00000498048 TRPC5Q9UL62 973 aaPredicted RBP9.95□□□□□ -0.82
PDZRN3-212ENST00000498048 ZNF609O15014 1411 aa9.95□□□□□ -0.82
PDZRN3-212ENST00000498048 QSER1Q2KHR3 1735 aa9.95□□□□□ -0.82
PDZRN3-212ENST00000498048 AKAP11Q9UKA4 1901 aa9.95□□□□□ -0.82
PDZRN3-212ENST00000498048 ATP6V1AP38606 617 aa9.94□□□□□ -0.82
PDZRN3-212ENST00000498048 IL6STP40189 918 aaPredicted RBP9.94□□□□□ -0.82
PDZRN3-212ENST00000498048 PDE1AP54750 535 aa9.94□□□□□ -0.82
PDZRN3-212ENST00000498048 HSP90AB3PQ58FF7 597 aa9.94□□□□□ -0.82
PDZRN3-212ENST00000498048 ERICH6Q7L0X2 663 aa9.94□□□□□ -0.82
PDZRN3-212ENST00000498048 C16orf71Q8IYS4 520 aaPredicted RBP9.94□□□□□ -0.82
PDZRN3-212ENST00000498048 RHPN1Q8TCX5 695 aa9.94□□□□□ -0.82
PDZRN3-212ENST00000498048 GJD4Q96KN9 370 aaPredicted RBP9.94□□□□□ -0.82
PDZRN3-212ENST00000498048 IPO9Q96P70 1041 aaKnown RBP9.94□□□□□ -0.82
PDZRN3-212ENST00000498048 IL1RAPL2Q9NP60 686 aa9.94□□□□□ -0.82
PDZRN3-212ENST00000498048 PA2G4Q9UQ80 394 aaKnown RBP9.94□□□□□ -0.82
PDZRN3-212ENST00000498048 KCNQ2O43526 872 aa9.93□□□□□ -0.82
PDZRN3-212ENST00000498048 SEC24BO95487 1268 aa9.93□□□□□ -0.82
PDZRN3-212ENST00000498048 CRKLP46109 303 aaKnown RBP9.93□□□□□ -0.82
PDZRN3-212ENST00000498048 CASP7P55210 303 aa9.93□□□□□ -0.82
PDZRN3-212ENST00000498048 RABL6Q3YEC7 729 aaPredicted RBP9.93□□□□□ -0.82
PDZRN3-212ENST00000498048 EPHA10Q5JZY3 1008 aa9.93□□□□□ -0.82
PDZRN3-212ENST00000498048 TBC1D9Q6ZT07 1266 aa9.93□□□□□ -0.82
PDZRN3-212ENST00000498048 DZIP3Q86Y13 1208 aaKnown RBP9.93□□□□□ -0.82
PDZRN3-212ENST00000498048 ARXQ96QS3 562 aa9.93□□□□□ -0.82
PDZRN3-212ENST00000498048 ISCA1Q9BUE6 129 aa9.93□□□□□ -0.82
PDZRN3-212ENST00000498048 OSBPL3Q9H4L5 887 aa9.93□□□□□ -0.82
PDZRN3-212ENST00000498048 NOP58Q9Y2X3 529 aaKnown RBP9.93□□□□□ -0.82
PDZRN3-212ENST00000498048 CHMP3Q9Y3E7 222 aa9.93□□□□□ -0.82
PDZRN3-212ENST00000498048 MAST2Q6P0Q8 1798 aa9.93□□□□□ -0.82
PDZRN3-212ENST00000498048 CNTNAP4Q9C0A0 1308 aa9.92□□□□□ -0.82
PDZRN3-212ENST00000498048 TCIRG1Q13488 830 aa9.92□□□□□ -0.82
PDZRN3-212ENST00000498048 ITPK1Q13572 414 aa9.92□□□□□ -0.82
PDZRN3-212ENST00000498048 TSHZ3Q63HK5 1081 aa9.92□□□□□ -0.82
PDZRN3-212ENST00000498048 CASC1Q6TDU7 716 aa9.92□□□□□ -0.82
PDZRN3-212ENST00000498048 GIGYF2Q6Y7W6 1299 aaKnown RBP9.92□□□□□ -0.82
PDZRN3-212ENST00000498048 JARID2Q92833 1246 aaPredicted RBP9.92□□□□□ -0.82
PDZRN3-212ENST00000498048 GPATCH3Q96I76 525 aa9.92□□□□□ -0.82
PDZRN3-212ENST00000498048 TBC1D32Q96NH3 1257 aa9.92□□□□□ -0.82
PDZRN3-212ENST00000498048 SIL1Q9H173 461 aa9.92□□□□□ -0.82
PDZRN3-212ENST00000498048 CCDC88AQ3V6T2 1871 aa9.91□□□□□ -0.82
PDZRN3-212ENST00000498048 RIC1Q4ADV7 1423 aa9.91□□□□□ -0.82
PDZRN3-212ENST00000498048 CDHR2Q9BYE9 1310 aa9.91□□□□□ -0.82
PDZRN3-212ENST00000498048 H7C1W4 665 aa9.91□□□□□ -0.82
PDZRN3-212ENST00000498048 EIF5BO60841 1220 aaKnown RBP9.91□□□□□ -0.82
PDZRN3-212ENST00000498048 G3BP1Q13283 466 aaKnown RBP eCLIP9.91□□□□□ -0.82
PDZRN3-212ENST00000498048 RTL5Q5HYW3 569 aaPredicted RBP9.91□□□□□ -0.82
PDZRN3-212ENST00000498048 NUTM1Q86Y26 1132 aa9.91□□□□□ -0.82
PDZRN3-212ENST00000498048 CLASRPQ8N2M8 674 aaKnown RBP9.91□□□□□ -0.82
PDZRN3-212ENST00000498048 TTC41PQ6P2S7 1318 aa9.9□□□□□ -0.82
PDZRN3-212ENST00000498048 USP42Q9H9J4 1324 aaKnown RBP9.9□□□□□ -0.82
PDZRN3-212ENST00000498048 ANKRD31Q8N7Z5 1873 aa9.9□□□□□ -0.82
PDZRN3-212ENST00000498048 ERVV-1B6SEH8 477 aa9.9□□□□□ -0.82
PDZRN3-212ENST00000498048 PCCAP05165 728 aaPredicted RBP9.9□□□□□ -0.82
PDZRN3-212ENST00000498048 SDSP20132 328 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms