RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 CITED4Q96RK1 184 aa8.41□□□□□ -1.06
VPS36-206ENST00000497149 FAM13BQ9NYF5 915 aa8.41□□□□□ -1.06
VPS36-206ENST00000497149 PCDHGC4Q9Y5F7 938 aa8.41□□□□□ -1.06
VPS36-206ENST00000497149 ATXN7O15265 892 aaPredicted RBP8.4□□□□□ -1.06
VPS36-206ENST00000497149 PDGFAP04085 211 aa8.4□□□□□ -1.06
VPS36-206ENST00000497149 ARSDP51689 593 aa8.4□□□□□ -1.06
VPS36-206ENST00000497149 RGS22Q8NE09 1264 aa8.4□□□□□ -1.06
VPS36-206ENST00000497149 PIK3R5Q8WYR1 880 aa8.4□□□□□ -1.06
VPS36-206ENST00000497149 RBCK1Q9BYM8 510 aa8.4□□□□□ -1.06
VPS36-206ENST00000497149 POLIQ9UNA4 740 aa8.4□□□□□ -1.06
VPS36-206ENST00000497149 RGL4Q8IZJ4 473 aa8.39□□□□□ -1.07
VPS36-206ENST00000497149 ZNF837Q96EG3 531 aaPredicted RBP8.39□□□□□ -1.07
VPS36-206ENST00000497149 ASB16Q96NS5 453 aa8.39□□□□□ -1.07
VPS36-206ENST00000497149 USP20Q9Y2K6 914 aa8.39□□□□□ -1.07
VPS36-206ENST00000497149 RTCBQ9Y3I0 505 aaKnown RBP8.39□□□□□ -1.07
VPS36-206ENST00000497149 FAM181BA6NEQ2 426 aa8.38□□□□□ -1.07
VPS36-206ENST00000497149 BNIP3LO60238 219 aa8.38□□□□□ -1.07
VPS36-206ENST00000497149 FAM157BP0CG42 384 aa8.38□□□□□ -1.07
VPS36-206ENST00000497149 PCSK2P16519 638 aa8.38□□□□□ -1.07
VPS36-206ENST00000497149 USP5P45974 858 aa8.38□□□□□ -1.07
VPS36-206ENST00000497149 TNP2Q05952 138 aa8.38□□□□□ -1.07
VPS36-206ENST00000497149 ZSCAN29Q8IWY8 852 aaPredicted RBP8.38□□□□□ -1.07
VPS36-206ENST00000497149 NUDT16Q96DE0 195 aaKnown RBP8.38□□□□□ -1.07
VPS36-206ENST00000497149 BRD7Q9NPI1 651 aa8.38□□□□□ -1.07
VPS36-206ENST00000497149 NDFIP2Q9NV92 336 aa8.38□□□□□ -1.07
VPS36-206ENST00000497149 ANKRD33BA6NCL7 494 aa8.37□□□□□ -1.07
VPS36-206ENST00000497149 EFSO43281 561 aa8.37□□□□□ -1.07
VPS36-206ENST00000497149 RPLP1P05386 114 aaKnown RBP8.37□□□□□ -1.07
VPS36-206ENST00000497149 EPB42P16452 691 aa8.37□□□□□ -1.07
VPS36-206ENST00000497149 ERCC3P19447 782 aa8.37□□□□□ -1.07
VPS36-206ENST00000497149 GRNP28799 593 aaKnown RBP8.37□□□□□ -1.07
VPS36-206ENST00000497149 GMPRP36959 345 aa8.37□□□□□ -1.07
VPS36-206ENST00000497149 TMC7Q7Z402 723 aa8.37□□□□□ -1.07
VPS36-206ENST00000497149 CMTR1Q8N1G2 835 aaKnown RBP8.37□□□□□ -1.07
VPS36-206ENST00000497149 VWA5B2Q8N398 1253 aa8.37□□□□□ -1.07
VPS36-206ENST00000497149 TMC1Q8TDI8 760 aa8.37□□□□□ -1.07
VPS36-206ENST00000497149 NANOS1Q8WY41 292 aaKnown RBP8.37□□□□□ -1.07
VPS36-206ENST00000497149 GTPBP3Q969Y2 492 aaKnown RBP8.37□□□□□ -1.07
VPS36-206ENST00000497149 GGNBP2Q9H3C7 697 aa8.37□□□□□ -1.07
VPS36-206ENST00000497149 KHNYNO15037 678 aaKnown RBP8.36□□□□□ -1.07
VPS36-206ENST00000497149 MAPTP10636 758 aaKnown RBP8.36□□□□□ -1.07
VPS36-206ENST00000497149 KCNQ4P56696 695 aa8.36□□□□□ -1.07
VPS36-206ENST00000497149 SFSWAPQ12872 951 aaKnown RBP8.36□□□□□ -1.07
VPS36-206ENST00000497149 PDE3BQ13370 1112 aa8.36□□□□□ -1.07
VPS36-206ENST00000497149 GJD3Q8N144 294 aa8.36□□□□□ -1.07
VPS36-206ENST00000497149 KCNH4Q9UQ05 1017 aa8.36□□□□□ -1.07
VPS36-206ENST00000497149 KCNMB2Q9Y691 235 aa8.36□□□□□ -1.07
VPS36-206ENST00000497149 DCDC2BA2VCK2 349 aa8.35□□□□□ -1.07
VPS36-206ENST00000497149 CDC14CA4D256 554 aa8.35□□□□□ -1.07
VPS36-206ENST00000497149 LAMC2Q13753 1193 aa8.35□□□□□ -1.07
VPS36-206ENST00000497149 C8orf34Q49A92 452 aa8.35□□□□□ -1.07
VPS36-206ENST00000497149 FOXR1Q6PIV2 292 aa8.35□□□□□ -1.07
VPS36-206ENST00000497149 SV2AQ7L0J3 742 aa8.35□□□□□ -1.07
VPS36-206ENST00000497149 TTC16Q8NEE8 873 aa8.35□□□□□ -1.07
VPS36-206ENST00000497149 ABHD17AQ96GS6 310 aa8.35□□□□□ -1.07
VPS36-206ENST00000497149 FAM129BQ96TA1 746 aa8.35□□□□□ -1.07
VPS36-206ENST00000497149 C11orf16Q9NQ32 467 aa8.35□□□□□ -1.07
VPS36-206ENST00000497149 HCN2Q9UL51 889 aa8.35□□□□□ -1.07
VPS36-206ENST00000497149 FNDC3AQ9Y2H6 1198 aaKnown RBP8.35□□□□□ -1.07
VPS36-206ENST00000497149 ERBB4Q15303 1308 aa8.34□□□□□ -1.07
VPS36-206ENST00000497149 IGHA2P01877 340 aa8.34□□□□□ -1.07
VPS36-206ENST00000497149 LORP23490 312 aaPredicted RBP8.34□□□□□ -1.07
VPS36-206ENST00000497149 DMRTB1Q96MA1 342 aa8.34□□□□□ -1.07
VPS36-206ENST00000497149 CFHR5Q9BXR6 569 aa8.34□□□□□ -1.07
VPS36-206ENST00000497149 STRN4Q9NRL3 753 aa8.34□□□□□ -1.07
VPS36-206ENST00000497149 ATXN7L1Q9ULK2 861 aaPredicted RBP8.34□□□□□ -1.07
VPS36-206ENST00000497149 UBAP1LF5GYI3 381 aa8.33□□□□□ -1.08
VPS36-206ENST00000497149 XYLBO75191 536 aa8.33□□□□□ -1.08
VPS36-206ENST00000497149 EGFRP00533 1210 aa8.33□□□□□ -1.08
VPS36-206ENST00000497149 EHHADHQ08426 723 aa8.33□□□□□ -1.08
VPS36-206ENST00000497149 TRIP4Q15650 581 aaPredicted RBP8.33□□□□□ -1.08
VPS36-206ENST00000497149 ZSCAN1Q8NBB4 408 aa8.33□□□□□ -1.08
VPS36-206ENST00000497149 TRERF1Q96PN7 1200 aa8.33□□□□□ -1.08
VPS36-206ENST00000497149 MARK1Q9P0L2 795 aa8.33□□□□□ -1.08
VPS36-206ENST00000497149 PHF24Q9UPV7 400 aa8.33□□□□□ -1.08
VPS36-206ENST00000497149 A6NHS1 94 aa8.32□□□□□ -1.08
VPS36-206ENST00000497149 GPR25O00155 361 aa8.32□□□□□ -1.08
VPS36-206ENST00000497149 TREHO43280 583 aa8.32□□□□□ -1.08
VPS36-206ENST00000497149 VEGFBP49765 207 aa8.32□□□□□ -1.08
VPS36-206ENST00000497149 PLCB3Q01970 1234 aa8.32□□□□□ -1.08
VPS36-206ENST00000497149 XKR5Q6UX68 686 aa8.32□□□□□ -1.08
VPS36-206ENST00000497149 NPAS4Q8IUM7 802 aa8.32□□□□□ -1.08
VPS36-206ENST00000497149 FOXD4L4Q8WXT5 416 aaPredicted RBP8.32□□□□□ -1.08
VPS36-206ENST00000497149 GPR182O15218 404 aa8.31□□□□□ -1.08
VPS36-206ENST00000497149 CD33P20138 364 aa8.31□□□□□ -1.08
VPS36-206ENST00000497149 DSC3Q14574 896 aa8.31□□□□□ -1.08
VPS36-206ENST00000497149 GRIN2CQ14957 1233 aa8.31□□□□□ -1.08
VPS36-206ENST00000497149 PDE12Q6L8Q7 609 aaKnown RBP8.31□□□□□ -1.08
VPS36-206ENST00000497149 ALKBH8Q96BT7 664 aaKnown RBP8.31□□□□□ -1.08
VPS36-206ENST00000497149 GSX2Q9BZM3 304 aa8.31□□□□□ -1.08
VPS36-206ENST00000497149 FGFR3P22607 806 aa8.3□□□□□ -1.08
VPS36-206ENST00000497149 CCINQ13939 588 aa8.3□□□□□ -1.08
VPS36-206ENST00000497149 COL19A1Q14993 1142 aa8.3□□□□□ -1.08
VPS36-206ENST00000497149 NIF3L1Q9GZT8 377 aa8.3□□□□□ -1.08
VPS36-206ENST00000497149 CTBSQ01459 385 aa8.29□□□□□ -1.08
VPS36-206ENST00000497149 FAM182BQ5T319 152 aa8.29□□□□□ -1.08
VPS36-206ENST00000497149 ZNF438Q7Z4V0 828 aa8.29□□□□□ -1.08
VPS36-206ENST00000497149 ELP3Q9H9T3 547 aa8.29□□□□□ -1.08
VPS36-206ENST00000497149 AMOTL2Q9Y2J4 779 aa8.29□□□□□ -1.08
VPS36-206ENST00000497149 SASH3O75995 380 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms