RNA–Protein interactions for RNA: ENST00000496703.1

ITGB5-210, Transcript of integrin subunit beta 5, humanhuman

TSL 2

Gene ITGB5, Length 789 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-210ENST00000496703 PARP10Q53GL7 1025 aa20.88■□□□□ 0.93
ITGB5-210ENST00000496703 PRPF40BQ6NWY9 871 aaKnown RBP20.88■□□□□ 0.93
ITGB5-210ENST00000496703 NLRP10Q86W26 655 aa20.88■□□□□ 0.93
ITGB5-210ENST00000496703 SYNE4Q8N205 404 aa20.88■□□□□ 0.93
ITGB5-210ENST00000496703 RIC1Q4ADV7 1423 aa20.87■□□□□ 0.93
ITGB5-210ENST00000496703 ZNF521Q96K83 1311 aa20.87■□□□□ 0.93
ITGB5-210ENST00000496703 C21orf2O43822 256 aa20.87■□□□□ 0.93
ITGB5-210ENST00000496703 TWISTNBQ3B726 338 aaPredicted RBP20.87■□□□□ 0.93
ITGB5-210ENST00000496703 CRY2Q49AN0 593 aa20.87■□□□□ 0.93
ITGB5-210ENST00000496703 C9orf131Q5VYM1 1079 aa20.87■□□□□ 0.93
ITGB5-210ENST00000496703 CNKSR1Q969H4 720 aa20.87■□□□□ 0.93
ITGB5-210ENST00000496703 NFKBIEO00221 500 aa20.86■□□□□ 0.93
ITGB5-210ENST00000496703 NPR1P16066 1061 aa20.86■□□□□ 0.93
ITGB5-210ENST00000496703 HSP90AB3PQ58FF7 597 aa20.86■□□□□ 0.93
ITGB5-210ENST00000496703 PPP1R42Q7Z4L9 355 aa20.86■□□□□ 0.93
ITGB5-210ENST00000496703 UTP14AQ9BVJ6 771 aaKnown RBP20.86■□□□□ 0.93
ITGB5-210ENST00000496703 TIAM2Q8IVF5 1701 aa20.85■□□□□ 0.93
ITGB5-210ENST00000496703 ATP5J2-PTCD1G3V325 749 aa20.85■□□□□ 0.93
ITGB5-210ENST00000496703 CCER2I3L3R5 266 aa20.85■□□□□ 0.93
ITGB5-210ENST00000496703 CCDC30Q5VVM6 783 aa20.85■□□□□ 0.93
ITGB5-210ENST00000496703 C7orf43Q8WVR3 580 aa20.85■□□□□ 0.93
ITGB5-210ENST00000496703 ISCA1Q9BUE6 129 aa20.85■□□□□ 0.93
ITGB5-210ENST00000496703 EXOSC9Q06265 439 aaKnown RBP20.84■□□□□ 0.93
ITGB5-210ENST00000496703 OLFM4Q6UX06 510 aa20.84■□□□□ 0.93
ITGB5-210ENST00000496703 SLC51AQ86UW1 340 aa20.84■□□□□ 0.93
ITGB5-210ENST00000496703 ZNF526Q8TF50 670 aaPredicted RBP20.84■□□□□ 0.93
ITGB5-210ENST00000496703 VAMP4O75379 141 aa20.83■□□□□ 0.93
ITGB5-210ENST00000496703 SLC10A5Q5PT55 438 aa20.83■□□□□ 0.93
ITGB5-210ENST00000496703 G2E3Q7L622 706 aa20.83■□□□□ 0.93
ITGB5-210ENST00000496703 RNF181Q9P0P0 153 aa20.83■□□□□ 0.93
ITGB5-210ENST00000496703 RIC3Q7Z5B4 369 aa20.82■□□□□ 0.92
ITGB5-210ENST00000496703 TRMT112Q9UI30 125 aaKnown RBP20.82■□□□□ 0.92
ITGB5-210ENST00000496703 HCLS1P14317 486 aaPredicted RBP20.81■□□□□ 0.92
ITGB5-210ENST00000496703 GOLGA2Q08379 1002 aa20.81■□□□□ 0.92
ITGB5-210ENST00000496703 HOXA10P31260 410 aaPredicted RBP20.8■□□□□ 0.92
ITGB5-210ENST00000496703 RNF123Q5XPI4 1314 aa20.79■□□□□ 0.92
ITGB5-210ENST00000496703 SNED1Q8TER0 1413 aa20.79■□□□□ 0.92
ITGB5-210ENST00000496703 SLC4A2P04920 1241 aa20.79■□□□□ 0.92
ITGB5-210ENST00000496703 DIEXFQ68CQ4 756 aaKnown RBP20.79■□□□□ 0.92
ITGB5-210ENST00000496703 MIER1Q8N108 512 aa20.79■□□□□ 0.92
ITGB5-210ENST00000496703 MYD88Q99836 296 aa20.79■□□□□ 0.92
ITGB5-210ENST00000496703 GPBP1L1Q9HC44 474 aaPredicted RBP20.79■□□□□ 0.92
ITGB5-210ENST00000496703 COL4A1P02462 1669 aa20.79■□□□□ 0.92
ITGB5-210ENST00000496703 SH3TC1Q8TE82 1336 aa20.78■□□□□ 0.92
ITGB5-210ENST00000496703 LMNB1P20700 586 aa20.78■□□□□ 0.92
ITGB5-210ENST00000496703 ALDH1B1P30837 517 aa20.78■□□□□ 0.92
ITGB5-210ENST00000496703 TRIM28Q13263 835 aaKnown RBP20.78■□□□□ 0.92
ITGB5-210ENST00000496703 FAM89AQ96GI7 184 aa20.78■□□□□ 0.92
ITGB5-210ENST00000496703 NLRP3Q96P20 1036 aa20.78■□□□□ 0.92
ITGB5-210ENST00000496703 STK31Q9BXU1 1019 aa20.78■□□□□ 0.92
ITGB5-210ENST00000496703 MAP3K2Q9Y2U5 619 aa20.78■□□□□ 0.92
ITGB5-210ENST00000496703 PI4KAP2A4QPH2 592 aa20.77■□□□□ 0.92
ITGB5-210ENST00000496703 RTL5Q5HYW3 569 aaPredicted RBP20.77■□□□□ 0.92
ITGB5-210ENST00000496703 KSR2Q6VAB6 950 aa20.77■□□□□ 0.92
ITGB5-210ENST00000496703 PI4KAP1Q8N8J0 262 aa20.77■□□□□ 0.92
ITGB5-210ENST00000496703 RPGRQ92834 1020 aaKnown RBP20.77■□□□□ 0.92
ITGB5-210ENST00000496703 METTL22Q9BUU2 404 aaPredicted RBP20.77■□□□□ 0.92
ITGB5-210ENST00000496703 CHMP4AQ9BY43 222 aa20.77■□□□□ 0.92
ITGB5-210ENST00000496703 MYH16Q9H6N6 1097 aa20.77■□□□□ 0.92
ITGB5-210ENST00000496703 MYH3P11055 1940 aa20.76■□□□□ 0.91
ITGB5-210ENST00000496703 CRAMP1Q96RY5 1269 aa20.76■□□□□ 0.91
ITGB5-210ENST00000496703 TAOK3Q9H2K8 898 aa20.76■□□□□ 0.91
ITGB5-210ENST00000496703 LTBP3Q9NS15 1303 aa20.76■□□□□ 0.91
ITGB5-210ENST00000496703 CCDC93Q567U6 631 aa20.75■□□□□ 0.91
ITGB5-210ENST00000496703 RBM17Q96I25 401 aaKnown RBP20.75■□□□□ 0.91
ITGB5-210ENST00000496703 ABCC4O15439 1325 aa20.75■□□□□ 0.91
ITGB5-210ENST00000496703 DDX58O95786 925 aaKnown RBP20.74■□□□□ 0.91
ITGB5-210ENST00000496703 IGKV5-2P06315 115 aa20.74■□□□□ 0.91
ITGB5-210ENST00000496703 SOGA3Q5TF21 947 aa20.74■□□□□ 0.91
ITGB5-210ENST00000496703 JARID2Q92833 1246 aaPredicted RBP20.74■□□□□ 0.91
ITGB5-210ENST00000496703 CDCA7LQ96GN5 454 aa20.74■□□□□ 0.91
ITGB5-210ENST00000496703 KIF3CO14782 793 aa20.73■□□□□ 0.91
ITGB5-210ENST00000496703 FLIIQ13045 1269 aa20.73■□□□□ 0.91
ITGB5-210ENST00000496703 NMRK2Q9NPI5 230 aa20.73■□□□□ 0.91
ITGB5-210ENST00000496703 IRS4O14654 1257 aaPredicted RBP20.71■□□□□ 0.91
ITGB5-210ENST00000496703 PPEF1O14829 653 aaPredicted RBP20.71■□□□□ 0.91
ITGB5-210ENST00000496703 SLFN5Q08AF3 891 aa20.71■□□□□ 0.91
ITGB5-210ENST00000496703 ZBTB38Q8NAP3 1195 aaPredicted RBP20.71■□□□□ 0.91
ITGB5-210ENST00000496703 CCDC191Q8NCU4 936 aa20.71■□□□□ 0.91
ITGB5-210ENST00000496703 ZNF277Q9NRM2 450 aaPredicted RBP20.71■□□□□ 0.91
ITGB5-210ENST00000496703 COL4A5P29400 1685 aa20.7■□□□□ 0.91
ITGB5-210ENST00000496703 LRRC37AA6NMS7 1700 aa20.7■□□□□ 0.9
ITGB5-210ENST00000496703 C1QTNF8P60827 252 aa20.7■□□□□ 0.9
ITGB5-210ENST00000496703 FKBP4Q02790 459 aaKnown RBP eCLIP20.7■□□□□ 0.9
ITGB5-210ENST00000496703 CWF19L2Q2TBE0 894 aaKnown RBP20.7■□□□□ 0.9
ITGB5-210ENST00000496703 RTKN2Q8IZC4 609 aa20.7■□□□□ 0.9
ITGB5-210ENST00000496703 CWC25Q9NXE8 425 aaPredicted RBP20.7■□□□□ 0.9
ITGB5-210ENST00000496703 ZC3H4Q9UPT8 1303 aaKnown RBP20.7■□□□□ 0.9
ITGB5-210ENST00000496703 CEP350Q5VT06 3117 aa20.69■□□□□ 0.9
ITGB5-210ENST00000496703 PCCAP05165 728 aaPredicted RBP20.69■□□□□ 0.9
ITGB5-210ENST00000496703 FKBP5Q13451 457 aaPredicted RBP20.69■□□□□ 0.9
ITGB5-210ENST00000496703 SF3B3Q15393 1217 aaKnown RBP20.69■□□□□ 0.9
ITGB5-210ENST00000496703 NEURL1BA8MQ27 555 aa20.68■□□□□ 0.9
ITGB5-210ENST00000496703 E9PSI1 815 aa20.68■□□□□ 0.9
ITGB5-210ENST00000496703 SPEF2Q9C093 1822 aa20.67■□□□□ 0.9
ITGB5-210ENST00000496703 DDX46Q7L014 1031 aaKnown RBP20.67■□□□□ 0.9
ITGB5-210ENST00000496703 CELF1Q92879 486 aaKnown RBP20.67■□□□□ 0.9
ITGB5-210ENST00000496703 PSMD1Q99460 953 aa20.67■□□□□ 0.9
ITGB5-210ENST00000496703 ATP6V0A2Q9Y487 856 aa20.67■□□□□ 0.9
ITGB5-210ENST00000496703 WDR90Q96KV7 1748 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms