RNA–Protein interactions for RNA: ENST00000496684.6

CCT3-215, Transcript of chaperonin containing TCP1 subunit 3, human

TSL 2

Gene CCT3, Length 748 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCT3-215	ENST00000496684	PNMA8A	Q86V59	439 aa	Predicted RBP	10.25	□□□□□ -0.77
CCT3-215	ENST00000496684	GPR101	Q96P66	508 aa	Predicted RBP	10.25	□□□□□ -0.77
CCT3-215	ENST00000496684	SETDB2	Q96T68	719 aa		10.25	□□□□□ -0.77
CCT3-215	ENST00000496684	POLR3GL	Q9BT43	218 aa		10.25	□□□□□ -0.77
CCT3-215	ENST00000496684	IARS	P41252	1262 aa	Known RBP	10.24	□□□□□ -0.77
CCT3-215	ENST00000496684	PIP4K2A	P48426	406 aa	Predicted RBP	10.24	□□□□□ -0.77
CCT3-215	ENST00000496684	GPC2	Q8N158	579 aa		10.24	□□□□□ -0.77
CCT3-215	ENST00000496684	PANK3	Q9H999	370 aa		10.24	□□□□□ -0.77
CCT3-215	ENST00000496684	NUP98	P52948	1817 aa		10.23	□□□□□ -0.77
CCT3-215	ENST00000496684	NPR1	P16066	1061 aa		10.23	□□□□□ -0.77
CCT3-215	ENST00000496684	EPS15	P42566	896 aa		10.23	□□□□□ -0.77
CCT3-215	ENST00000496684	SCNN1D	P51172	638 aa		10.23	□□□□□ -0.77
CCT3-215	ENST00000496684	MORC1	Q86VD1	984 aa		10.23	□□□□□ -0.77
CCT3-215	ENST00000496684	SYNE4	Q8N205	404 aa		10.23	□□□□□ -0.77
CCT3-215	ENST00000496684	TLL2	Q9Y6L7	1015 aa		10.23	□□□□□ -0.77
CCT3-215	ENST00000496684	KCNQ3	O43525	872 aa		10.22	□□□□□ -0.77
CCT3-215	ENST00000496684	ZNF790	Q6PG37	636 aa		10.22	□□□□□ -0.77
CCT3-215	ENST00000496684	NBPF5P	Q86XG9	351 aa	Predicted RBP	10.22	□□□□□ -0.77
CCT3-215	ENST00000496684	DZIP3	Q86Y13	1208 aa	Known RBP	10.22	□□□□□ -0.77
CCT3-215	ENST00000496684	REM2	Q8IYK8	340 aa	Predicted RBP	10.22	□□□□□ -0.77
CCT3-215	ENST00000496684	TTC5	Q8N0Z6	440 aa		10.22	□□□□□ -0.77
CCT3-215	ENST00000496684	IL17RE	Q8NFR9	667 aa		10.22	□□□□□ -0.77
CCT3-215	ENST00000496684	COL3A1	P02461	1466 aa	Predicted RBP	10.22	□□□□□ -0.77
CCT3-215	ENST00000496684	POLR2A	P24928	1970 aa	Known RBP	10.21	□□□□□ -0.77
CCT3-215	ENST00000496684	NPHP1	O15259	732 aa		10.21	□□□□□ -0.77
CCT3-215	ENST00000496684	ECE1	P42892	770 aa		10.21	□□□□□ -0.77
CCT3-215	ENST00000496684	RTKN2	Q8IZC4	609 aa		10.21	□□□□□ -0.77
CCT3-215	ENST00000496684	ZIC5	Q96T25	663 aa		10.21	□□□□□ -0.77
CCT3-215	ENST00000496684	BEGAIN	Q9BUH8	593 aa		10.21	□□□□□ -0.77
CCT3-215	ENST00000496684	GJA3	Q9Y6H8	435 aa		10.21	□□□□□ -0.77
CCT3-215	ENST00000496684	ABCC12	Q96J65	1359 aa		10.21	□□□□□ -0.78
CCT3-215	ENST00000496684	LAMB4	A4D0S4	1761 aa		10.21	□□□□□ -0.78
CCT3-215	ENST00000496684	PRAMEF22	A3QJZ6	481 aa		10.2	□□□□□ -0.78
CCT3-215	ENST00000496684	MAP2K2	P36507	400 aa		10.2	□□□□□ -0.78
CCT3-215	ENST00000496684	DGKZ	Q13574	1117 aa		10.2	□□□□□ -0.78
CCT3-215	ENST00000496684	PSMD1	Q99460	953 aa		10.2	□□□□□ -0.78
CCT3-215	ENST00000496684	AKAP11	Q9UKA4	1901 aa		10.19	□□□□□ -0.78
CCT3-215	ENST00000496684	CEMIP	Q8WUJ3	1361 aa		10.19	□□□□□ -0.78
CCT3-215	ENST00000496684	GSE1	Q14687	1217 aa		10.19	□□□□□ -0.78
CCT3-215	ENST00000496684	SAPCD2	Q86UD0	394 aa		10.19	□□□□□ -0.78
CCT3-215	ENST00000496684	HS6ST3	Q8IZP7	471 aa		10.19	□□□□□ -0.78
CCT3-215	ENST00000496684	TEX13A	Q9BXU3	409 aa	Predicted RBP	10.19	□□□□□ -0.78
CCT3-215	ENST00000496684	USP16	Q9Y5T5	823 aa		10.19	□□□□□ -0.78
CCT3-215	ENST00000496684	LAMB2	P55268	1798 aa		10.19	□□□□□ -0.78
CCT3-215	ENST00000496684	MKI67	P46013	3256 aa	Known RBP	10.18	□□□□□ -0.78
CCT3-215	ENST00000496684	FAM177B	A6PVY3	158 aa		10.18	□□□□□ -0.78
CCT3-215	ENST00000496684	BRPF1	P55201	1214 aa	Predicted RBP	10.18	□□□□□ -0.78
CCT3-215	ENST00000496684	SOX10	P56693	466 aa		10.18	□□□□□ -0.78
CCT3-215	ENST00000496684	CIAPIN1	Q6FI81	312 aa		10.18	□□□□□ -0.78
CCT3-215	ENST00000496684	CLEC4G	Q6UXB4	293 aa		10.18	□□□□□ -0.78
CCT3-215	ENST00000496684	FMNL2	Q96PY5	1086 aa		10.18	□□□□□ -0.78
CCT3-215	ENST00000496684	GLIS2	Q9BZE0	524 aa	Predicted RBP	10.18	□□□□□ -0.78
CCT3-215	ENST00000496684	HTT	P42858	3142 aa		10.18	□□□□□ -0.78
CCT3-215	ENST00000496684	RIC1	Q4ADV7	1423 aa		10.17	□□□□□ -0.78
CCT3-215	ENST00000496684	NBPF26	B4DH59	902 aa		10.17	□□□□□ -0.78
CCT3-215	ENST00000496684	CA12	O43570	354 aa		10.17	□□□□□ -0.78
CCT3-215	ENST00000496684	LMOD1	P29536	600 aa	Predicted RBP	10.17	□□□□□ -0.78
CCT3-215	ENST00000496684	EIF6	P56537	245 aa	Known RBP	10.17	□□□□□ -0.78
CCT3-215	ENST00000496684	TEF	Q10587	303 aa		10.17	□□□□□ -0.78
CCT3-215	ENST00000496684	CRY2	Q49AN0	593 aa		10.17	□□□□□ -0.78
CCT3-215	ENST00000496684	NBPF10	Q6P3W6	841 aa	Known RBP	10.17	□□□□□ -0.78
CCT3-215	ENST00000496684	USP50	Q70EL3	339 aa	Predicted RBP	10.17	□□□□□ -0.78
CCT3-215	ENST00000496684	NBPF15	Q8N660	670 aa		10.17	□□□□□ -0.78
CCT3-215	ENST00000496684	JDP2	Q8WYK2	163 aa		10.17	□□□□□ -0.78
CCT3-215	ENST00000496684	NIP7	Q9Y221	180 aa	Known RBP eCLIP	10.17	□□□□□ -0.78
CCT3-215	ENST00000496684	CELF2	O95319	508 aa	Known RBP	10.16	□□□□□ -0.78
CCT3-215	ENST00000496684	HLF	Q16534	295 aa		10.16	□□□□□ -0.78
CCT3-215	ENST00000496684	TAF1	P21675	1872 aa		10.16	□□□□□ -0.78
CCT3-215	ENST00000496684	CEP290	O15078	2479 aa		10.15	□□□□□ -0.78
CCT3-215	ENST00000496684	GNAT3	A8MTJ3	354 aa		10.15	□□□□□ -0.78
CCT3-215	ENST00000496684	ALDH1B1	P30837	517 aa		10.15	□□□□□ -0.78
CCT3-215	ENST00000496684	DLK2	Q6UY11	383 aa		10.15	□□□□□ -0.78
CCT3-215	ENST00000496684	TPTE2	Q6XPS3	522 aa		10.15	□□□□□ -0.78
CCT3-215	ENST00000496684	NUTM1	Q86Y26	1132 aa		10.15	□□□□□ -0.78
CCT3-215	ENST00000496684	LARGE2	Q8N3Y3	721 aa		10.15	□□□□□ -0.78
CCT3-215	ENST00000496684	HHIPL1	Q96JK4	782 aa		10.15	□□□□□ -0.78
CCT3-215	ENST00000496684	GPRC5D	Q9NZD1	345 aa		10.15	□□□□□ -0.78
CCT3-215	ENST00000496684	ZNF652	Q9Y2D9	606 aa		10.15	□□□□□ -0.78
CCT3-215	ENST00000496684	NPC1L1	Q9UHC9	1359 aa		10.14	□□□□□ -0.79
CCT3-215	ENST00000496684	KDM3B	Q7LBC6	1761 aa		10.14	□□□□□ -0.79
CCT3-215	ENST00000496684	DIAPH1	O60610	1272 aa	Known RBP	10.14	□□□□□ -0.79
CCT3-215	ENST00000496684	HSPA5	P11021	654 aa	Known RBP	10.14	□□□□□ -0.79
CCT3-215	ENST00000496684	HIRA	P54198	1017 aa	Predicted RBP	10.14	□□□□□ -0.79
CCT3-215	ENST00000496684	PRPF38B	Q5VTL8	546 aa	Known RBP	10.14	□□□□□ -0.79
CCT3-215	ENST00000496684	C3orf67	Q6ZVT6	689 aa		10.14	□□□□□ -0.79
CCT3-215	ENST00000496684	NPM2	Q86SE8	214 aa	Known RBP	10.14	□□□□□ -0.79
CCT3-215	ENST00000496684	TRPM4	Q8TD43	1214 aa		10.14	□□□□□ -0.79
CCT3-215	ENST00000496684	ADARB2	Q9NS39	739 aa	Known RBP	10.14	□□□□□ -0.79
CCT3-215	ENST00000496684	PGAP2	Q9UHJ9	254 aa		10.14	□□□□□ -0.79
CCT3-215	ENST00000496684	DUOX1	Q9NRD9	1551 aa		10.14	□□□□□ -0.79
CCT3-215	ENST00000496684	SHTN1	A0MZ66	631 aa		10.13	□□□□□ -0.79
CCT3-215	ENST00000496684	BTBD11	A6QL63	1104 aa		10.13	□□□□□ -0.79
CCT3-215	ENST00000496684	HOXA10	P31260	410 aa	Predicted RBP	10.13	□□□□□ -0.79
CCT3-215	ENST00000496684	GMPS	P49915	693 aa	Predicted RBP	10.13	□□□□□ -0.79
CCT3-215	ENST00000496684	CXCL9	Q07325	125 aa		10.13	□□□□□ -0.79
CCT3-215	ENST00000496684	AOC3	Q16853	763 aa		10.13	□□□□□ -0.79
CCT3-215	ENST00000496684	DCAF8	Q5TAQ9	597 aa		10.13	□□□□□ -0.79
CCT3-215	ENST00000496684	RNF25	Q96BH1	459 aa	Predicted RBP	10.13	□□□□□ -0.79
CCT3-215	ENST00000496684	KNSTRN	Q9Y448	316 aa		10.13	□□□□□ -0.79
CCT3-215	ENST00000496684	CENPF	P49454	3210 aa		10.13	□□□□□ -0.79

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