RNA–Protein interactions for RNA: ENST00000496569.1

HDLBP-246, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-246ENST00000496569 PDZRN3Q9UPQ7 1066 aa15.86■□□□□ 0.13
HDLBP-246ENST00000496569 IBTKQ9P2D0 1353 aaPredicted RBP15.86■□□□□ 0.13
HDLBP-246ENST00000496569 HOXB7P09629 217 aa15.85■□□□□ 0.13
HDLBP-246ENST00000496569 LMNB1P20700 586 aa15.85■□□□□ 0.13
HDLBP-246ENST00000496569 PHAXQ9H814 394 aaKnown RBP15.85■□□□□ 0.13
HDLBP-246ENST00000496569 COL4A1P02462 1669 aa15.84■□□□□ 0.13
HDLBP-246ENST00000496569 CALD1Q05682 793 aaKnown RBP15.84■□□□□ 0.13
HDLBP-246ENST00000496569 NLRP10Q86W26 655 aa15.84■□□□□ 0.13
HDLBP-246ENST00000496569 C7orf43Q8WVR3 580 aa15.84■□□□□ 0.13
HDLBP-246ENST00000496569 DBF4Q9UBU7 674 aaPredicted RBP15.84■□□□□ 0.13
HDLBP-246ENST00000496569 RIC1Q4ADV7 1423 aa15.84■□□□□ 0.13
HDLBP-246ENST00000496569 ATP5J2-PTCD1G3V325 749 aa15.83■□□□□ 0.12
HDLBP-246ENST00000496569 TCIRG1Q13488 830 aa15.83■□□□□ 0.12
HDLBP-246ENST00000496569 HCLS1P14317 486 aaPredicted RBP15.82■□□□□ 0.12
HDLBP-246ENST00000496569 CRY2Q49AN0 593 aa15.82■□□□□ 0.12
HDLBP-246ENST00000496569 PARP10Q53GL7 1025 aa15.82■□□□□ 0.12
HDLBP-246ENST00000496569 PPP1R42Q7Z4L9 355 aa15.82■□□□□ 0.12
HDLBP-246ENST00000496569 UTP14AQ9BVJ6 771 aaKnown RBP15.82■□□□□ 0.12
HDLBP-246ENST00000496569 TAOK3Q9H2K8 898 aa15.82■□□□□ 0.12
HDLBP-246ENST00000496569 CCDC27Q2M243 656 aa15.81■□□□□ 0.12
HDLBP-246ENST00000496569 CCDC93Q567U6 631 aa15.81■□□□□ 0.12
HDLBP-246ENST00000496569 RTL5Q5HYW3 569 aaPredicted RBP15.81■□□□□ 0.12
HDLBP-246ENST00000496569 ANKRD13DQ6ZTN6 518 aa15.81■□□□□ 0.12
HDLBP-246ENST00000496569 PLBD2Q8NHP8 589 aa15.81■□□□□ 0.12
HDLBP-246ENST00000496569 SNED1Q8TER0 1413 aa15.81■□□□□ 0.12
HDLBP-246ENST00000496569 RPGRQ92834 1020 aaKnown RBP15.81■□□□□ 0.12
HDLBP-246ENST00000496569 COL4A5P29400 1685 aa15.8■□□□□ 0.12
HDLBP-246ENST00000496569 FANCIQ9NVI1 1328 aa15.8■□□□□ 0.12
HDLBP-246ENST00000496569 HSP90AB3PQ58FF7 597 aa15.8■□□□□ 0.12
HDLBP-246ENST00000496569 RRAGCQ9HB90 399 aa15.8■□□□□ 0.12
HDLBP-246ENST00000496569 SPINK5Q9NQ38 1064 aaPredicted RBP15.8■□□□□ 0.12
HDLBP-246ENST00000496569 ZNF277Q9NRM2 450 aaPredicted RBP15.8■□□□□ 0.12
HDLBP-246ENST00000496569 HYPKQ9NX55 129 aa15.8■□□□□ 0.12
HDLBP-246ENST00000496569 TRMT112Q9UI30 125 aaKnown RBP15.8■□□□□ 0.12
HDLBP-246ENST00000496569 CACNA1FO60840 1977 aa15.8■□□□□ 0.12
HDLBP-246ENST00000496569 ISCA1Q9BUE6 129 aa15.79■□□□□ 0.12
HDLBP-246ENST00000496569 SPEF2Q9C093 1822 aa15.79■□□□□ 0.12
HDLBP-246ENST00000496569 ABCC4O15439 1325 aa15.78■□□□□ 0.12
HDLBP-246ENST00000496569 LTBP3Q9NS15 1303 aa15.78■□□□□ 0.12
HDLBP-246ENST00000496569 WDR90Q96KV7 1748 aa15.78■□□□□ 0.12
HDLBP-246ENST00000496569 JARID2Q92833 1246 aaPredicted RBP15.78■□□□□ 0.12
HDLBP-246ENST00000496569 KDM2BQ8NHM5 1336 aa15.77■□□□□ 0.12
HDLBP-246ENST00000496569 MYH3P11055 1940 aa15.77■□□□□ 0.12
HDLBP-246ENST00000496569 PPEF1O14829 653 aaPredicted RBP15.77■□□□□ 0.12
HDLBP-246ENST00000496569 ALDH1B1P30837 517 aa15.77■□□□□ 0.12
HDLBP-246ENST00000496569 HOXA10P31260 410 aaPredicted RBP15.77■□□□□ 0.12
HDLBP-246ENST00000496569 FKBP4Q02790 459 aaKnown RBP eCLIP15.77■□□□□ 0.122e-6■■□□□ 12.2
HDLBP-246ENST00000496569 GOLGA2Q08379 1002 aa15.77■□□□□ 0.12
HDLBP-246ENST00000496569 TWISTNBQ3B726 338 aaPredicted RBP15.77■□□□□ 0.12
HDLBP-246ENST00000496569 G2E3Q7L622 706 aa15.77■□□□□ 0.12
HDLBP-246ENST00000496569 RIC3Q7Z5B4 369 aa15.77■□□□□ 0.12
HDLBP-246ENST00000496569 FAM89AQ96GI7 184 aa15.77■□□□□ 0.12
HDLBP-246ENST00000496569 MYD88Q99836 296 aa15.77■□□□□ 0.12
HDLBP-246ENST00000496569 IL16Q14005 1332 aa15.76■□□□□ 0.11
HDLBP-246ENST00000496569 SH3TC1Q8TE82 1336 aa15.76■□□□□ 0.11
HDLBP-246ENST00000496569 GLTPD2A6NH11 291 aa15.76■□□□□ 0.11
HDLBP-246ENST00000496569 SOGA3Q5TF21 947 aa15.76■□□□□ 0.11
HDLBP-246ENST00000496569 CCDC30Q5VVM6 783 aa15.76■□□□□ 0.11
HDLBP-246ENST00000496569 RBM17Q96I25 401 aaKnown RBP15.76■□□□□ 0.11
HDLBP-246ENST00000496569 NLRP3Q96P20 1036 aa15.76■□□□□ 0.11
HDLBP-246ENST00000496569 LRRC37AA6NMS7 1700 aa15.76■□□□□ 0.11
HDLBP-246ENST00000496569 ZC3H4Q9UPT8 1303 aaKnown RBP15.75■□□□□ 0.11
HDLBP-246ENST00000496569 EXOSC9Q06265 439 aaKnown RBP15.75■□□□□ 0.11
HDLBP-246ENST00000496569 SLC10A5Q5PT55 438 aa15.75■□□□□ 0.11
HDLBP-246ENST00000496569 CRAMP1Q96RY5 1269 aa15.75■□□□□ 0.11
HDLBP-246ENST00000496569 ZNF541Q9H0D2 1346 aa15.74■□□□□ 0.11
HDLBP-246ENST00000496569 DDNO94850 711 aaPredicted RBP15.74■□□□□ 0.11
HDLBP-246ENST00000496569 RNF123Q5XPI4 1314 aa15.73■□□□□ 0.11
HDLBP-246ENST00000496569 POTECB2RU33 542 aa15.73■□□□□ 0.11
HDLBP-246ENST00000496569 MAP3K2Q9Y2U5 619 aa15.73■□□□□ 0.11
HDLBP-246ENST00000496569 DUOX1Q9NRD9 1551 aa15.73■□□□□ 0.11
HDLBP-246ENST00000496569 TOMM70O94826 608 aa15.72■□□□□ 0.11
HDLBP-246ENST00000496569 IARSP41252 1262 aaKnown RBP15.72■□□□□ 0.11
HDLBP-246ENST00000496569 WDR63Q8IWG1 891 aa15.72■□□□□ 0.11
HDLBP-246ENST00000496569 C16orf71Q8IYS4 520 aaPredicted RBP15.72■□□□□ 0.11
HDLBP-246ENST00000496569 RTKN2Q8IZC4 609 aa15.72■□□□□ 0.11
HDLBP-246ENST00000496569 SCN4AP35499 1836 aa15.71■□□□□ 0.11
HDLBP-246ENST00000496569 PI4KAP2A4QPH2 592 aa15.71■□□□□ 0.11
HDLBP-246ENST00000496569 IRS4O14654 1257 aaPredicted RBP15.71■□□□□ 0.11
HDLBP-246ENST00000496569 HSPA6P17066 643 aa15.71■□□□□ 0.11
HDLBP-246ENST00000496569 PI4KAP1Q8N8J0 262 aa15.71■□□□□ 0.11
HDLBP-246ENST00000496569 CCDC85AQ96PX6 553 aaPredicted RBP15.71■□□□□ 0.11
HDLBP-246ENST00000496569 METTL22Q9BUU2 404 aaPredicted RBP15.71■□□□□ 0.11
HDLBP-246ENST00000496569 STK31Q9BXU1 1019 aa15.71■□□□□ 0.11
HDLBP-246ENST00000496569 LTBP1Q14766 1721 aa15.71■□□□□ 0.1
HDLBP-246ENST00000496569 VAMP4O75379 141 aa15.7■□□□□ 0.1
HDLBP-246ENST00000496569 SLC4A2P04920 1241 aa15.7■□□□□ 0.1
HDLBP-246ENST00000496569 IGKV5-2P06315 115 aa15.7■□□□□ 0.1
HDLBP-246ENST00000496569 POTEIP0CG38 1075 aa15.7■□□□□ 0.1
HDLBP-246ENST00000496569 POTEJP0CG39 1038 aa15.7■□□□□ 0.1
HDLBP-246ENST00000496569 HTRA3P83110 453 aa15.7■□□□□ 0.1
HDLBP-246ENST00000496569 CWF19L2Q2TBE0 894 aaKnown RBP15.7■□□□□ 0.1
HDLBP-246ENST00000496569 NCBP3Q53F19 620 aaKnown RBP15.7■□□□□ 0.1
HDLBP-246ENST00000496569 DDX46Q7L014 1031 aaKnown RBP15.7■□□□□ 0.1
HDLBP-246ENST00000496569 CELF1Q92879 486 aaKnown RBP15.7■□□□□ 0.1
HDLBP-246ENST00000496569 ZNF521Q96K83 1311 aa15.69■□□□□ 0.1
HDLBP-246ENST00000496569 DDX58O95786 925 aaKnown RBP15.69■□□□□ 0.1
HDLBP-246ENST00000496569 TRIM28Q13263 835 aaKnown RBP15.69■□□□□ 0.1
HDLBP-246ENST00000496569 GRAPQ13588 217 aa15.69■□□□□ 0.1
HDLBP-246ENST00000496569 RBM46Q8TBY0 533 aaKnown RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms