RNA–Protein interactions for RNA: ENST00000496427.5

CHCHD3-206, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5

Gene CHCHD3, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-206ENST00000496427 DMRTA1Q5VZB9 504 aa9.51□□□□□ -0.89
CHCHD3-206ENST00000496427 SULT6B1Q6IMI4 303 aa9.51□□□□□ -0.89
CHCHD3-206ENST00000496427 PLPP6Q8IY26 295 aa9.51□□□□□ -0.89
CHCHD3-206ENST00000496427 SOS1Q07889 1333 aaPredicted RBP9.51□□□□□ -0.89
CHCHD3-206ENST00000496427 PSEN2P49810 448 aa9.5□□□□□ -0.89
CHCHD3-206ENST00000496427 SLC39A6Q13433 755 aa9.5□□□□□ -0.89
CHCHD3-206ENST00000496427 AMOTQ4VCS5 1084 aa9.5□□□□□ -0.89
CHCHD3-206ENST00000496427 ZBTB1Q9Y2K1 713 aa9.5□□□□□ -0.89
CHCHD3-206ENST00000496427 ZPR1O75312 459 aa9.49□□□□□ -0.89
CHCHD3-206ENST00000496427 HSPA1AP0DMV8 641 aaKnown RBP9.49□□□□□ -0.89
CHCHD3-206ENST00000496427 HSPA1BP0DMV9 641 aaKnown RBP9.49□□□□□ -0.89
CHCHD3-206ENST00000496427 NFIXQ14938 502 aa9.49□□□□□ -0.89
CHCHD3-206ENST00000496427 TNS4Q8IZW8 715 aa9.49□□□□□ -0.89
CHCHD3-206ENST00000496427 SMC1BQ8NDV3 1235 aa9.49□□□□□ -0.89
CHCHD3-206ENST00000496427 PANK3Q9H999 370 aa9.49□□□□□ -0.89
CHCHD3-206ENST00000496427 BCL2L12Q9HB09 334 aa9.49□□□□□ -0.89
CHCHD3-206ENST00000496427 LGR6Q9HBX8 967 aa9.49□□□□□ -0.89
CHCHD3-206ENST00000496427 NFKBIEO00221 500 aa9.48□□□□□ -0.89
CHCHD3-206ENST00000496427 CYP19A1P11511 503 aaPredicted RBP9.48□□□□□ -0.89
CHCHD3-206ENST00000496427 AMER1Q5JTC6 1135 aaPredicted RBP9.48□□□□□ -0.89
CHCHD3-206ENST00000496427 MORC1Q86VD1 984 aa9.48□□□□□ -0.89
CHCHD3-206ENST00000496427 KCTD12Q96CX2 325 aaKnown RBP9.48□□□□□ -0.89
CHCHD3-206ENST00000496427 SCN4AP35499 1836 aa9.47□□□□□ -0.89
CHCHD3-206ENST00000496427 SERPINB2P05120 415 aa9.47□□□□□ -0.89
CHCHD3-206ENST00000496427 HSPA5P11021 654 aaKnown RBP9.47□□□□□ -0.89
CHCHD3-206ENST00000496427 LMNB1P20700 586 aa9.47□□□□□ -0.89
CHCHD3-206ENST00000496427 IL13P35225 146 aa9.47□□□□□ -0.89
CHCHD3-206ENST00000496427 AKAP4Q5JQC9 854 aa9.47□□□□□ -0.89
CHCHD3-206ENST00000496427 BICDL1Q6ZP65 573 aa9.47□□□□□ -0.89
CHCHD3-206ENST00000496427 C2CD5Q86YS7 1000 aa9.47□□□□□ -0.89
CHCHD3-206ENST00000496427 CCDC24Q8N4L8 307 aa9.47□□□□□ -0.89
CHCHD3-206ENST00000496427 SLC52A2Q9HAB3 445 aa9.47□□□□□ -0.89
CHCHD3-206ENST00000496427 NARFQ9UHQ1 456 aa9.47□□□□□ -0.89
CHCHD3-206ENST00000496427 GLTPD2A6NH11 291 aa9.46□□□□□ -0.9
CHCHD3-206ENST00000496427 POTECB2RU33 542 aa9.46□□□□□ -0.9
CHCHD3-206ENST00000496427 RNMTO43148 476 aaKnown RBP9.46□□□□□ -0.9
CHCHD3-206ENST00000496427 HMOX1P09601 288 aa9.46□□□□□ -0.9
CHCHD3-206ENST00000496427 CANXP27824 592 aaKnown RBP9.46□□□□□ -0.9
CHCHD3-206ENST00000496427 ZC3H4Q9UPT8 1303 aaKnown RBP9.46□□□□□ -0.9
CHCHD3-206ENST00000496427 RGS20O76081 388 aa9.45□□□□□ -0.9
CHCHD3-206ENST00000496427 VEGFAP15692 232 aaPredicted RBP9.45□□□□□ -0.9
CHCHD3-206ENST00000496427 TTLL6Q8N841 843 aa9.45□□□□□ -0.9
CHCHD3-206ENST00000496427 LAMB4A4D0S4 1761 aa9.45□□□□□ -0.9
CHCHD3-206ENST00000496427 DLG5Q8TDM6 1919 aa9.44□□□□□ -0.9
CHCHD3-206ENST00000496427 DSG2Q14126 1118 aa9.44□□□□□ -0.9
CHCHD3-206ENST00000496427 TBC1D9BQ66K14 1250 aa9.44□□□□□ -0.9
CHCHD3-206ENST00000496427 ZNF622Q969S3 477 aaKnown RBP eCLIP9.44□□□□□ -0.97e-19■□□□□ 8.6
CHCHD3-206ENST00000496427 ZNF330Q9Y3S2 320 aaPredicted RBP9.44□□□□□ -0.9
CHCHD3-206ENST00000496427 ADAMTSL1Q8N6G6 1762 aa9.44□□□□□ -0.9
CHCHD3-206ENST00000496427 TRPM7Q96QT4 1865 aa9.43□□□□□ -0.9
CHCHD3-206ENST00000496427 NUP98P52948 1817 aa9.43□□□□□ -0.9
CHCHD3-206ENST00000496427 COL3A1P02461 1466 aaPredicted RBP9.43□□□□□ -0.9
CHCHD3-206ENST00000496427 H0YIN7 160 aa9.43□□□□□ -0.9
CHCHD3-206ENST00000496427 C21orf2O43822 256 aa9.43□□□□□ -0.9
CHCHD3-206ENST00000496427 MTHFSDQ2M296 383 aaKnown RBP9.43□□□□□ -0.9
CHCHD3-206ENST00000496427 SLC4A5Q9BY07 1137 aa9.43□□□□□ -0.9
CHCHD3-206ENST00000496427 MKRN1Q9UHC7 482 aaKnown RBP9.43□□□□□ -0.9
CHCHD3-206ENST00000496427 EIF4G2P78344 907 aaKnown RBP eCLIP9.42□□□□□ -0.92e-10■■■■□ 24.2
CHCHD3-206ENST00000496427 PRR5LQ6MZQ0 368 aa9.42□□□□□ -0.9
CHCHD3-206ENST00000496427 KCNK17Q96T54 332 aa9.42□□□□□ -0.9
CHCHD3-206ENST00000496427 VPS9D1Q9Y2B5 631 aa9.42□□□□□ -0.9
CHCHD3-206ENST00000496427 DDNO94850 711 aaPredicted RBP9.41□□□□□ -0.9
CHCHD3-206ENST00000496427 EIF5P55010 431 aaKnown RBP9.41□□□□□ -0.9
CHCHD3-206ENST00000496427 TRIM26Q12899 539 aaPredicted RBP9.41□□□□□ -0.9
CHCHD3-206ENST00000496427 ERFEQ4G0M1 354 aa9.41□□□□□ -0.9
CHCHD3-206ENST00000496427 HS6ST3Q8IZP7 471 aa9.41□□□□□ -0.9
CHCHD3-206ENST00000496427 TBC1D2BQ9UPU7 963 aa9.41□□□□□ -0.9
CHCHD3-206ENST00000496427 KNSTRNQ9Y448 316 aa9.41□□□□□ -0.9
CHCHD3-206ENST00000496427 HEG1Q9ULI3 1381 aa9.4□□□□□ -0.9
CHCHD3-206ENST00000496427 LTBP1Q14766 1721 aa9.4□□□□□ -0.9
CHCHD3-206ENST00000496427 PIP4K2AP48426 406 aaPredicted RBP9.4□□□□□ -0.9
CHCHD3-206ENST00000496427 CNGB1Q14028 1251 aaPredicted RBP9.4□□□□□ -0.9
CHCHD3-206ENST00000496427 TTC5Q8N0Z6 440 aa9.4□□□□□ -0.9
CHCHD3-206ENST00000496427 VSIG10Q8N0Z9 540 aa9.4□□□□□ -0.9
CHCHD3-206ENST00000496427 PCGF6Q9BYE7 350 aa9.4□□□□□ -0.9
CHCHD3-206ENST00000496427 FOXN1O15353 648 aa9.39□□□□□ -0.91
CHCHD3-206ENST00000496427 OXER1Q8TDS5 423 aa9.39□□□□□ -0.91
CHCHD3-206ENST00000496427 ZNF496Q96IT1 587 aaPredicted RBP9.39□□□□□ -0.91
CHCHD3-206ENST00000496427 RYDENQ9NUL5 291 aaKnown RBP9.39□□□□□ -0.91
CHCHD3-206ENST00000496427 KDM3BQ7LBC6 1761 aa9.39□□□□□ -0.91
CHCHD3-206ENST00000496427 LAMB2P55268 1798 aa9.38□□□□□ -0.91
CHCHD3-206ENST00000496427 A0A087WZG4 1122 aa9.38□□□□□ -0.91
CHCHD3-206ENST00000496427 KCNQ3O43525 872 aa9.38□□□□□ -0.91
CHCHD3-206ENST00000496427 A1BGP04217 495 aa9.38□□□□□ -0.91
CHCHD3-206ENST00000496427 PDE6BP35913 854 aa9.38□□□□□ -0.91
CHCHD3-206ENST00000496427 CC2D1BQ5T0F9 858 aaKnown RBP9.38□□□□□ -0.91
CHCHD3-206ENST00000496427 PRPF40BQ6NWY9 871 aaKnown RBP9.38□□□□□ -0.91
CHCHD3-206ENST00000496427 BRIP1Q9BX63 1249 aa9.38□□□□□ -0.91
CHCHD3-206ENST00000496427 TAOK3Q9H2K8 898 aa9.38□□□□□ -0.91
CHCHD3-206ENST00000496427 TIMELESSQ9UNS1 1208 aa9.38□□□□□ -0.91
CHCHD3-206ENST00000496427 THSD7BQ9C0I4 1608 aa9.38□□□□□ -0.91
CHCHD3-206ENST00000496427 CNTNAP1P78357 1384 aa9.37□□□□□ -0.91
CHCHD3-206ENST00000496427 ZNF541Q9H0D2 1346 aa9.37□□□□□ -0.91
CHCHD3-206ENST00000496427 LTBP3Q9NS15 1303 aa9.37□□□□□ -0.91
CHCHD3-206ENST00000496427 COL4A5P29400 1685 aa9.37□□□□□ -0.91
CHCHD3-206ENST00000496427 NPHP1O15259 732 aa9.37□□□□□ -0.91
CHCHD3-206ENST00000496427 DIAPH1O60610 1272 aaKnown RBP9.37□□□□□ -0.91
CHCHD3-206ENST00000496427 CAMTA2O94983 1202 aa9.37□□□□□ -0.91
CHCHD3-206ENST00000496427 STARD3NLO95772 234 aa9.37□□□□□ -0.91
CHCHD3-206ENST00000496427 TEFQ10587 303 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms