RNA–Protein interactions for RNA: ENST00000495327.1

RBM28-208, Transcript of RNA binding motif protein 28, humanhuman

TSL 2

Gene RBM28, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-208ENST00000495327 TCIRG1Q13488 830 aa17.25■□□□□ 0.35
RBM28-208ENST00000495327 C8orf58Q8NAV2 365 aa17.25■□□□□ 0.35
RBM28-208ENST00000495327 PLBD2Q8NHP8 589 aa17.25■□□□□ 0.35
RBM28-208ENST00000495327 TSR2Q969E8 191 aaKnown RBP17.25■□□□□ 0.35
RBM28-208ENST00000495327 PRELPP51888 382 aa17.24■□□□□ 0.35
RBM28-208ENST00000495327 C1QTNF8P60827 252 aa17.24■□□□□ 0.35
RBM28-208ENST00000495327 NLRP10Q86W26 655 aa17.24■□□□□ 0.35
RBM28-208ENST00000495327 ZNF526Q8TF50 670 aaPredicted RBP17.24■□□□□ 0.35
RBM28-208ENST00000495327 C7orf43Q8WVR3 580 aa17.24■□□□□ 0.35
RBM28-208ENST00000495327 UTP14AQ9BVJ6 771 aaKnown RBP17.24■□□□□ 0.35
RBM28-208ENST00000495327 SNED1Q8TER0 1413 aa17.23■□□□□ 0.35
RBM28-208ENST00000495327 ALDH1B1P30837 517 aa17.23■□□□□ 0.35
RBM28-208ENST00000495327 ANKRD13DQ6ZTN6 518 aa17.23■□□□□ 0.35
RBM28-208ENST00000495327 WDR63Q8IWG1 891 aa17.23■□□□□ 0.35
RBM28-208ENST00000495327 SENP3-EIF4A1A0A087X0R7 540 aa17.22■□□□□ 0.35
RBM28-208ENST00000495327 ELL2O00472 640 aaPredicted RBP17.22■□□□□ 0.35
RBM28-208ENST00000495327 HOXA10P31260 410 aaPredicted RBP17.22■□□□□ 0.35
RBM28-208ENST00000495327 CCDC93Q567U6 631 aa17.22■□□□□ 0.35
RBM28-208ENST00000495327 SLC10A5Q5PT55 438 aa17.22■□□□□ 0.35
RBM28-208ENST00000495327 CCDC30Q5VVM6 783 aa17.22■□□□□ 0.35
RBM28-208ENST00000495327 FAM9BQ8IZU0 186 aa17.22■□□□□ 0.35
RBM28-208ENST00000495327 TSPYL6Q8N831 410 aa17.22■□□□□ 0.35
RBM28-208ENST00000495327 TAOK3Q9H2K8 898 aa17.22■□□□□ 0.35
RBM28-208ENST00000495327 ZNF219Q9P2Y4 722 aaPredicted RBP17.22■□□□□ 0.35
RBM28-208ENST00000495327 FANCIQ9NVI1 1328 aa17.21■□□□□ 0.35
RBM28-208ENST00000495327 RPGRQ92834 1020 aaKnown RBP17.21■□□□□ 0.35
RBM28-208ENST00000495327 ISCA1Q9BUE6 129 aa17.21■□□□□ 0.35
RBM28-208ENST00000495327 LRRC37AA6NMS7 1700 aa17.21■□□□□ 0.35
RBM28-208ENST00000495327 WDR90Q96KV7 1748 aa17.21■□□□□ 0.35
RBM28-208ENST00000495327 KIF3CO14782 793 aa17.2■□□□□ 0.34
RBM28-208ENST00000495327 GOLGA2Q08379 1002 aa17.2■□□□□ 0.34
RBM28-208ENST00000495327 NLRP3Q96P20 1036 aa17.2■□□□□ 0.34
RBM28-208ENST00000495327 KDM2BQ8NHM5 1336 aa17.2■□□□□ 0.34
RBM28-208ENST00000495327 SH3TC1Q8TE82 1336 aa17.2■□□□□ 0.34
RBM28-208ENST00000495327 TAF1P21675 1872 aa17.19■□□□□ 0.34
RBM28-208ENST00000495327 TWISTNBQ3B726 338 aaPredicted RBP17.19■□□□□ 0.34
RBM28-208ENST00000495327 CRAMP1Q96RY5 1269 aa17.19■□□□□ 0.34
RBM28-208ENST00000495327 PHAXQ9H814 394 aaKnown RBP17.19■□□□□ 0.34
RBM28-208ENST00000495327 TRMT112Q9UI30 125 aaKnown RBP17.19■□□□□ 0.34
RBM28-208ENST00000495327 MYH3P11055 1940 aa17.19■□□□□ 0.34
RBM28-208ENST00000495327 TRIM28Q13263 835 aaKnown RBP17.18■□□□□ 0.34
RBM28-208ENST00000495327 C3orf67Q6ZVT6 689 aa17.18■□□□□ 0.34
RBM28-208ENST00000495327 RIC3Q7Z5B4 369 aa17.18■□□□□ 0.34
RBM28-208ENST00000495327 RBM17Q96I25 401 aaKnown RBP17.18■□□□□ 0.34
RBM28-208ENST00000495327 FKBP4Q02790 459 aaKnown RBP eCLIP17.17■□□□□ 0.34
RBM28-208ENST00000495327 CC2D2BQ6DHV5 1058 aa17.17■□□□□ 0.34
RBM28-208ENST00000495327 RTKN2Q8IZC4 609 aa17.17■□□□□ 0.34
RBM28-208ENST00000495327 STK31Q9BXU1 1019 aa17.17■□□□□ 0.34
RBM28-208ENST00000495327 SALL2Q9Y467 1007 aaPredicted RBP17.17■□□□□ 0.34
RBM28-208ENST00000495327 DDX58O95786 925 aaKnown RBP17.16■□□□□ 0.34
RBM28-208ENST00000495327 NMRK2Q9NPI5 230 aa17.16■□□□□ 0.34
RBM28-208ENST00000495327 ZNF521Q96K83 1311 aa17.16■□□□□ 0.34
RBM28-208ENST00000495327 GLTPD2A6NH11 291 aa17.15■□□□□ 0.34
RBM28-208ENST00000495327 ATP5J2-PTCD1G3V325 749 aa17.15■□□□□ 0.34
RBM28-208ENST00000495327 GRIPAP1Q4V328 841 aa17.15■□□□□ 0.34
RBM28-208ENST00000495327 OLFM4Q6UX06 510 aa17.15■□□□□ 0.34
RBM28-208ENST00000495327 PSMD1Q99460 953 aa17.15■□□□□ 0.34
RBM28-208ENST00000495327 ABCC4O15439 1325 aa17.15■□□□□ 0.34
RBM28-208ENST00000495327 SCN4AP35499 1836 aa17.14■□□□□ 0.34
RBM28-208ENST00000495327 PPEF1O14829 653 aaPredicted RBP17.14■□□□□ 0.33
RBM28-208ENST00000495327 HCLS1P14317 486 aaPredicted RBP17.14■□□□□ 0.33
RBM28-208ENST00000495327 SYNE4Q8N205 404 aa17.14■□□□□ 0.33
RBM28-208ENST00000495327 MYH16Q9H6N6 1097 aa17.14■□□□□ 0.33
RBM28-208ENST00000495327 CCER2I3L3R5 266 aa17.13■□□□□ 0.33
RBM28-208ENST00000495327 CCDC191Q8NCU4 936 aa17.13■□□□□ 0.33
RBM28-208ENST00000495327 MYD88Q99836 296 aa17.13■□□□□ 0.33
RBM28-208ENST00000495327 METTL22Q9BUU2 404 aaPredicted RBP17.13■□□□□ 0.33
RBM28-208ENST00000495327 SPINK5Q9NQ38 1064 aaPredicted RBP17.13■□□□□ 0.33
RBM28-208ENST00000495327 LTBP1Q14766 1721 aa17.13■□□□□ 0.33
RBM28-208ENST00000495327 CEP350Q5VT06 3117 aa17.12■□□□□ 0.33
RBM28-208ENST00000495327 TOMM70O94826 608 aa17.12■□□□□ 0.33
RBM28-208ENST00000495327 EXOSC9Q06265 439 aaKnown RBP17.12■□□□□ 0.33
RBM28-208ENST00000495327 KSR2Q6VAB6 950 aa17.12■□□□□ 0.33
RBM28-208ENST00000495327 FAM89AQ96GI7 184 aa17.12■□□□□ 0.33
RBM28-208ENST00000495327 COL4A1P02462 1669 aa17.11■□□□□ 0.33
RBM28-208ENST00000495327 COL4A5P29400 1685 aa17.11■□□□□ 0.33
RBM28-208ENST00000495327 PI4KAP2A4QPH2 592 aa17.11■□□□□ 0.33
RBM28-208ENST00000495327 VAMP4O75379 141 aa17.11■□□□□ 0.33
RBM28-208ENST00000495327 SF3B3Q15393 1217 aaKnown RBP17.11■□□□□ 0.33
RBM28-208ENST00000495327 PI4KAP1Q8N8J0 262 aa17.11■□□□□ 0.33
RBM28-208ENST00000495327 ZBTB38Q8NAP3 1195 aaPredicted RBP17.11■□□□□ 0.33
RBM28-208ENST00000495327 MAP3K2Q9Y2U5 619 aa17.11■□□□□ 0.33
RBM28-208ENST00000495327 DUOX1Q9NRD9 1551 aa17.11■□□□□ 0.33
RBM28-208ENST00000495327 SLC4A2P04920 1241 aa17.1■□□□□ 0.33
RBM28-208ENST00000495327 HSP90B1P14625 803 aaKnown RBP17.1■□□□□ 0.33
RBM28-208ENST00000495327 IARSP41252 1262 aaKnown RBP17.1■□□□□ 0.33
RBM28-208ENST00000495327 GRAPQ13588 217 aa17.1■□□□□ 0.33
RBM28-208ENST00000495327 DPY19L2Q6NUT2 758 aa17.1■□□□□ 0.33
RBM28-208ENST00000495327 DDX46Q7L014 1031 aaKnown RBP17.1■□□□□ 0.33
RBM28-208ENST00000495327 G2E3Q7L622 706 aa17.1■□□□□ 0.33
RBM28-208ENST00000495327 GRAPLQ8TC17 118 aaPredicted RBP17.1■□□□□ 0.33
RBM28-208ENST00000495327 ZNF277Q9NRM2 450 aaPredicted RBP17.1■□□□□ 0.33
RBM28-208ENST00000495327 CWC25Q9NXE8 425 aaPredicted RBP17.1■□□□□ 0.33
RBM28-208ENST00000495327 ATP6V0A2Q9Y487 856 aa17.1■□□□□ 0.33
RBM28-208ENST00000495327 IRS4O14654 1257 aaPredicted RBP17.09■□□□□ 0.33
RBM28-208ENST00000495327 TCERG1O14776 1098 aaKnown RBP17.09■□□□□ 0.33
RBM28-208ENST00000495327 BBOX1O75936 387 aa17.09■□□□□ 0.33
RBM28-208ENST00000495327 PCCAP05165 728 aaPredicted RBP17.09■□□□□ 0.33
RBM28-208ENST00000495327 FLIIQ13045 1269 aa17.09■□□□□ 0.33
RBM28-208ENST00000495327 TMC4Q7Z404 712 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms