RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 TRAPPC3LQ5T215 181 aa8.82□□□□□ -1
SMC4-224ENST00000494612 SIX5Q8N196 739 aa8.82□□□□□ -1
SMC4-224ENST00000494612 OGFOD1Q8N543 542 aa8.82□□□□□ -1
SMC4-224ENST00000494612 MKRN1Q9UHC7 482 aaKnown RBP8.82□□□□□ -1
SMC4-224ENST00000494612 HCN4Q9Y3Q4 1203 aa8.82□□□□□ -1
SMC4-224ENST00000494612 C21orf2O43822 256 aa8.81□□□□□ -1
SMC4-224ENST00000494612 ALBP02768 609 aa8.81□□□□□ -1
SMC4-224ENST00000494612 SPEM2Q0P670 501 aa8.81□□□□□ -1
SMC4-224ENST00000494612 C8orf86Q6ZUL3 223 aa8.81□□□□□ -1
SMC4-224ENST00000494612 KRTAP19-1Q8IUB9 90 aa8.81□□□□□ -1
SMC4-224ENST00000494612 ANKIB1Q9P2G1 1089 aa8.81□□□□□ -1
SMC4-224ENST00000494612 NID1P14543 1247 aa8.8□□□□□ -1
SMC4-224ENST00000494612 ADGRE1Q14246 886 aa8.8□□□□□ -1
SMC4-224ENST00000494612 TSEN2Q8NCE0 465 aaKnown RBP8.8□□□□□ -1
SMC4-224ENST00000494612 ZNF280CQ8ND82 737 aa8.8□□□□□ -1
SMC4-224ENST00000494612 PHACTR1Q9C0D0 580 aa8.8□□□□□ -1
SMC4-224ENST00000494612 NRG1Q02297 640 aaPredicted RBP8.79□□□□□ -1
SMC4-224ENST00000494612 MBTPS1Q14703 1052 aa8.79□□□□□ -1
SMC4-224ENST00000494612 TXNRD3Q86VQ6 643 aa8.79□□□□□ -1
SMC4-224ENST00000494612 HSH2DQ96JZ2 352 aa8.79□□□□□ -1
SMC4-224ENST00000494612 SUSD3Q96L08 255 aa8.79□□□□□ -1
SMC4-224ENST00000494612 BRD7Q9NPI1 651 aa8.79□□□□□ -1
SMC4-224ENST00000494612 SFI1A8K8P3 1242 aa8.78□□□□□ -1
SMC4-224ENST00000494612 ADH7P40394 386 aa8.78□□□□□ -1
SMC4-224ENST00000494612 TYRO3Q06418 890 aa8.78□□□□□ -1
SMC4-224ENST00000494612 C20orf204Q6ZNR8 217 aa8.78□□□□□ -1
SMC4-224ENST00000494612 STAG2Q8N3U4 1231 aa8.78□□□□□ -1
SMC4-224ENST00000494612 TP53INP1Q96A56 240 aa8.78□□□□□ -1
SMC4-224ENST00000494612 CEP63Q96MT8 703 aa8.78□□□□□ -1
SMC4-224ENST00000494612 KCNH4Q9UQ05 1017 aa8.78□□□□□ -1
SMC4-224ENST00000494612 ELNP15502 786 aa8.77□□□□□ -1.01
SMC4-224ENST00000494612 RAB44Q7Z6P3 723 aaPredicted RBP8.77□□□□□ -1.01
SMC4-224ENST00000494612 FNBP4Q8N3X1 1017 aaPredicted RBP8.77□□□□□ -1.01
SMC4-224ENST00000494612 PPP1R12BO60237 982 aaPredicted RBP8.76□□□□□ -1.01
SMC4-224ENST00000494612 LILRB5O75023 590 aa8.76□□□□□ -1.01
SMC4-224ENST00000494612 RAC1P63000 192 aa8.76□□□□□ -1.01
SMC4-224ENST00000494612 ZNF594Q96JF6 807 aaPredicted RBP8.76□□□□□ -1.01
SMC4-224ENST00000494612 C2orf49Q9BVC5 232 aaPredicted RBP8.76□□□□□ -1.01
SMC4-224ENST00000494612 CHMP3Q9Y3E7 222 aa8.76□□□□□ -1.01
SMC4-224ENST00000494612 ATAD2Q6PL18 1390 aa8.75□□□□□ -1.01
SMC4-224ENST00000494612 KRTAP4-8A0A0G2JLE6 195 aa8.75□□□□□ -1.01
SMC4-224ENST00000494612 SELPP16109 830 aa8.75□□□□□ -1.01
SMC4-224ENST00000494612 ALDH16A1Q8IZ83 802 aa8.75□□□□□ -1.01
SMC4-224ENST00000494612 GAS2L2Q8NHY3 880 aa8.75□□□□□ -1.01
SMC4-224ENST00000494612 LENG1Q96BZ8 264 aaPredicted RBP8.75□□□□□ -1.01
SMC4-224ENST00000494612 A0A0A0MRY4 1105 aa8.74□□□□□ -1.01
SMC4-224ENST00000494612 ARID3CA6NKF2 412 aa8.74□□□□□ -1.01
SMC4-224ENST00000494612 MCTP1Q6DN14 999 aa8.74□□□□□ -1.01
SMC4-224ENST00000494612 TFIP11Q9UBB9 837 aaKnown RBP8.74□□□□□ -1.01
SMC4-224ENST00000494612 BTLAQ7Z6A9 289 aa8.73□□□□□ -1.01
SMC4-224ENST00000494612 USP21Q9UK80 565 aa8.73□□□□□ -1.01
SMC4-224ENST00000494612 PAX4O43316 350 aa8.72□□□□□ -1.01
SMC4-224ENST00000494612 RASA1P20936 1047 aa8.72□□□□□ -1.01
SMC4-224ENST00000494612 SCG3Q8WXD2 468 aaKnown RBP8.72□□□□□ -1.01
SMC4-224ENST00000494612 MAFBQ9Y5Q3 323 aaPredicted RBP8.72□□□□□ -1.01
SMC4-224ENST00000494612 SEC13P55735 322 aa8.71□□□□□ -1.02
SMC4-224ENST00000494612 SHISA2Q6UWI4 295 aa8.71□□□□□ -1.02
SMC4-224ENST00000494612 GLMNQ92990 594 aa8.71□□□□□ -1.02
SMC4-224ENST00000494612 BHMTQ93088 406 aa8.71□□□□□ -1.02
SMC4-224ENST00000494612 EFCC1Q9HA90 598 aa8.71□□□□□ -1.02
SMC4-224ENST00000494612 DMGDHQ9UI17 866 aaKnown RBP8.71□□□□□ -1.02
SMC4-224ENST00000494612 RNF112Q9ULX5 631 aa8.71□□□□□ -1.02
SMC4-224ENST00000494612 ILDR2Q71H61 639 aa8.7□□□□□ -1.02
SMC4-224ENST00000494612 ARID3AQ99856 593 aa8.7□□□□□ -1.02
SMC4-224ENST00000494612 GSX2Q9BZM3 304 aa8.7□□□□□ -1.02
SMC4-224ENST00000494612 RBM19Q9Y4C8 960 aaKnown RBP8.7□□□□□ -1.02
SMC4-224ENST00000494612 COBLO75128 1261 aa8.69□□□□□ -1.02
SMC4-224ENST00000494612 TXKP42681 527 aa8.69□□□□□ -1.02
SMC4-224ENST00000494612 KANK4Q5T7N3 995 aaPredicted RBP8.69□□□□□ -1.02
SMC4-224ENST00000494612 IER5Q5VY09 327 aa8.69□□□□□ -1.02
SMC4-224ENST00000494612 JPH1Q9HDC5 661 aaPredicted RBP8.69□□□□□ -1.02
SMC4-224ENST00000494612 ZNF777Q9ULD5 760 aaPredicted RBP8.69□□□□□ -1.02
SMC4-224ENST00000494612 BCS1LQ9Y276 419 aa8.69□□□□□ -1.02
SMC4-224ENST00000494612 A6NJR5 290 aa8.68□□□□□ -1.02
SMC4-224ENST00000494612 TBC1D8BQ0IIM8 1120 aa8.68□□□□□ -1.02
SMC4-224ENST00000494612 HIF1AQ16665 826 aa8.68□□□□□ -1.02
SMC4-224ENST00000494612 PTK7Q13308 1070 aa8.67□□□□□ -1.02
SMC4-224ENST00000494612 RTN1Q16799 776 aa8.67□□□□□ -1.02
SMC4-224ENST00000494612 CRTC2Q53ET0 693 aaPredicted RBP8.67□□□□□ -1.02
SMC4-224ENST00000494612 PROSER2Q86WR7 435 aaPredicted RBP8.67□□□□□ -1.02
SMC4-224ENST00000494612 CHMP7Q8WUX9 453 aaPredicted RBP8.67□□□□□ -1.02
SMC4-224ENST00000494612 NGLY1Q96IV0 654 aa8.67□□□□□ -1.02
SMC4-224ENST00000494612 UBE2OQ9C0C9 1292 aaKnown RBP8.67□□□□□ -1.02
SMC4-224ENST00000494612 SLC6A14Q9UN76 642 aa8.67□□□□□ -1.02
SMC4-224ENST00000494612 GRNP28799 593 aaKnown RBP8.66□□□□□ -1.02
SMC4-224ENST00000494612 LARP1Q6PKG0 1096 aaKnown RBP8.66□□□□□ -1.02
SMC4-224ENST00000494612 PPP1R12CQ9BZL4 782 aa8.66□□□□□ -1.02
SMC4-224ENST00000494612 C1orf115Q9H7X2 142 aa8.66□□□□□ -1.02
SMC4-224ENST00000494612 PCMTD2Q9NV79 361 aa8.66□□□□□ -1.02
SMC4-224ENST00000494612 TGFBR3LH3BV60 316 aa8.65□□□□□ -1.02
SMC4-224ENST00000494612 YBX3P16989 372 aaKnown RBP eCLIP8.65□□□□□ -1.02
SMC4-224ENST00000494612 IGFBP4P22692 258 aa8.65□□□□□ -1.02
SMC4-224ENST00000494612 DPYDQ12882 1025 aa8.65□□□□□ -1.02
SMC4-224ENST00000494612 FMR1NBQ8N0W7 255 aaPredicted RBP8.65□□□□□ -1.02
SMC4-224ENST00000494612 NUDT8Q8WV74 236 aa8.65□□□□□ -1.02
SMC4-224ENST00000494612 HINFPQ9BQA5 517 aa8.65□□□□□ -1.02
SMC4-224ENST00000494612 SSBP4Q9BWG4 385 aaPredicted RBP8.65□□□□□ -1.02
SMC4-224ENST00000494612 IGFLR1Q9H665 355 aa8.65□□□□□ -1.02
SMC4-224ENST00000494612 DNAJB12Q9NXW2 375 aaKnown RBP8.65□□□□□ -1.02
SMC4-224ENST00000494612 COL17A1Q9UMD9 1497 aaPredicted RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms