RNA–Protein interactions for RNA: ENST00000494016.1

CPSF7-213, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-213ENST00000494016 SEPT12Q8IYM1 358 aa7.97□□□□□ -1.13
CPSF7-213ENST00000494016 CCDC116Q8IYX3 515 aa7.97□□□□□ -1.13
CPSF7-213ENST00000494016 CRIPAKQ8N1N5 446 aa7.97□□□□□ -1.13
CPSF7-213ENST00000494016 KLF16Q9BXK1 252 aaPredicted RBP7.97□□□□□ -1.13
CPSF7-213ENST00000494016 ZMYND15Q9H091 742 aa7.97□□□□□ -1.13
CPSF7-213ENST00000494016 ALG2Q9H553 416 aa7.97□□□□□ -1.13
CPSF7-213ENST00000494016 STK26Q9P289 416 aa7.97□□□□□ -1.13
CPSF7-213ENST00000494016 CEP126Q9P2H0 1117 aa7.97□□□□□ -1.13
CPSF7-213ENST00000494016 MED14O60244 1454 aa7.97□□□□□ -1.13
CPSF7-213ENST00000494016 ALKQ9UM73 1620 aa7.96□□□□□ -1.13
CPSF7-213ENST00000494016 NPHP4O75161 1426 aaPredicted RBP7.96□□□□□ -1.13
CPSF7-213ENST00000494016 ARHGAP23Q9P227 1491 aa7.96□□□□□ -1.13
CPSF7-213ENST00000494016 WIPF1O43516 503 aa7.96□□□□□ -1.14
CPSF7-213ENST00000494016 TOM1O60784 492 aa7.96□□□□□ -1.14
CPSF7-213ENST00000494016 SMCPP49901 116 aaPredicted RBP7.96□□□□□ -1.14
CPSF7-213ENST00000494016 SEMA3FQ13275 785 aa7.96□□□□□ -1.14
CPSF7-213ENST00000494016 DACH1Q9UI36 760 aa7.96□□□□□ -1.14
CPSF7-213ENST00000494016 SLIT1O75093 1534 aa7.96□□□□□ -1.14
CPSF7-213ENST00000494016 TULP4Q9NRJ4 1543 aa7.96□□□□□ -1.14
CPSF7-213ENST00000494016 EVC2Q86UK5 1308 aa7.96□□□□□ -1.14
CPSF7-213ENST00000494016 TRAK2O60296 914 aa7.95□□□□□ -1.14
CPSF7-213ENST00000494016 EIF5BO60841 1220 aaKnown RBP7.95□□□□□ -1.14
CPSF7-213ENST00000494016 DHX9Q08211 1270 aaKnown RBP7.95□□□□□ -1.14
CPSF7-213ENST00000494016 CTC1Q2NKJ3 1217 aa7.95□□□□□ -1.14
CPSF7-213ENST00000494016 CCDC125Q86Z20 511 aa7.95□□□□□ -1.14
CPSF7-213ENST00000494016 EMILIN1Q9Y6C2 1016 aa7.95□□□□□ -1.14
CPSF7-213ENST00000494016 YTHDC2Q9H6S0 1430 aaKnown RBP7.95□□□□□ -1.14
CPSF7-213ENST00000494016 XIRP1Q702N8 1843 aaKnown RBP7.94□□□□□ -1.14
CPSF7-213ENST00000494016 CPS1P31327 1500 aa7.94□□□□□ -1.14
CPSF7-213ENST00000494016 MED1Q15648 1581 aaPredicted RBP7.94□□□□□ -1.14
CPSF7-213ENST00000494016 TIMP2P16035 220 aa7.94□□□□□ -1.14
CPSF7-213ENST00000494016 WDR4P57081 412 aaKnown RBP7.94□□□□□ -1.14
CPSF7-213ENST00000494016 PPP1R26Q5T8A7 1209 aaPredicted RBP7.94□□□□□ -1.14
CPSF7-213ENST00000494016 RNF20Q5VTR2 975 aa7.94□□□□□ -1.14
CPSF7-213ENST00000494016 PHTF2Q8N3S3 785 aa7.94□□□□□ -1.14
CPSF7-213ENST00000494016 ADAMTS19Q8TE59 1207 aa7.94□□□□□ -1.14
CPSF7-213ENST00000494016 GMPR2Q9P2T1 348 aaKnown RBP7.94□□□□□ -1.14
CPSF7-213ENST00000494016 NSD3Q9BZ95 1437 aa7.94□□□□□ -1.14
CPSF7-213ENST00000494016 RIMS2Q9UQ26 1411 aa7.94□□□□□ -1.14
CPSF7-213ENST00000494016 SETD1AO15047 1707 aaKnown RBP7.93□□□□□ -1.14
CPSF7-213ENST00000494016 ERVH48-1M5A8F1 160 aa7.93□□□□□ -1.14
CPSF7-213ENST00000494016 NFX1Q12986 1120 aaKnown RBP7.93□□□□□ -1.14
CPSF7-213ENST00000494016 SAFB2Q14151 953 aaKnown RBP eCLIP7.93□□□□□ -1.14
CPSF7-213ENST00000494016 MORC1Q86VD1 984 aa7.93□□□□□ -1.14
CPSF7-213ENST00000494016 ITPKCQ96DU7 683 aa7.93□□□□□ -1.14
CPSF7-213ENST00000494016 PRAM1Q96QH2 718 aa7.93□□□□□ -1.14
CPSF7-213ENST00000494016 CCDC9Q9Y3X0 531 aaKnown RBP7.93□□□□□ -1.14
CPSF7-213ENST00000494016 ZNF521Q96K83 1311 aa7.93□□□□□ -1.14
CPSF7-213ENST00000494016 POLR3AO14802 1390 aaPredicted RBP7.93□□□□□ -1.14
CPSF7-213ENST00000494016 USP32Q8NFA0 1604 aa7.92□□□□□ -1.14
CPSF7-213ENST00000494016 AXIN1O15169 862 aa7.92□□□□□ -1.14
CPSF7-213ENST00000494016 ZIC2O95409 532 aaPredicted RBP7.92□□□□□ -1.14
CPSF7-213ENST00000494016 RAB15P59190 212 aa7.92□□□□□ -1.14
CPSF7-213ENST00000494016 WDR43Q15061 677 aaKnown RBP eCLIP7.92□□□□□ -1.14
CPSF7-213ENST00000494016 HDGFL1Q5TGJ6 251 aa7.92□□□□□ -1.14
CPSF7-213ENST00000494016 TRMT2AQ8IZ69 625 aaKnown RBP7.92□□□□□ -1.14
CPSF7-213ENST00000494016 CDK19Q9BWU1 502 aa7.92□□□□□ -1.14
CPSF7-213ENST00000494016 PGPEP1Q9NXJ5 209 aa7.92□□□□□ -1.14
CPSF7-213ENST00000494016 POGKQ9P215 609 aa7.92□□□□□ -1.14
CPSF7-213ENST00000494016 RCAN3Q9UKA8 241 aa7.92□□□□□ -1.14
CPSF7-213ENST00000494016 PLEKHH1Q9ULM0 1364 aa7.92□□□□□ -1.14
CPSF7-213ENST00000494016 CAPN5O15484 640 aaPredicted RBP7.91□□□□□ -1.14
CPSF7-213ENST00000494016 SLFNL1Q499Z3 407 aa7.91□□□□□ -1.14
CPSF7-213ENST00000494016 B4GALNT3Q6L9W6 998 aa7.91□□□□□ -1.14
CPSF7-213ENST00000494016 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.91□□□□□ -1.14
CPSF7-213ENST00000494016 ZFAND3Q9H8U3 227 aa7.91□□□□□ -1.14
CPSF7-213ENST00000494016 TMPRSS4Q9NRS4 437 aa7.91□□□□□ -1.14
CPSF7-213ENST00000494016 ANKRD36BQ8N2N9 1353 aa7.91□□□□□ -1.14
CPSF7-213ENST00000494016 ABCC11Q96J66 1382 aa7.91□□□□□ -1.14
CPSF7-213ENST00000494016 DLC1Q96QB1 1528 aa7.91□□□□□ -1.14
CPSF7-213ENST00000494016 NRXN3Q9Y4C0 1643 aa7.9□□□□□ -1.14
CPSF7-213ENST00000494016 LRRC7Q96NW7 1537 aa7.9□□□□□ -1.14
CPSF7-213ENST00000494016 CD163L1Q9NR16 1453 aa7.9□□□□□ -1.14
CPSF7-213ENST00000494016 APAF1O14727 1248 aa7.9□□□□□ -1.14
CPSF7-213ENST00000494016 RRP1P56182 461 aaKnown RBP7.9□□□□□ -1.14
CPSF7-213ENST00000494016 SLFN5Q08AF3 891 aa7.9□□□□□ -1.14
CPSF7-213ENST00000494016 WAPLQ7Z5K2 1190 aa7.9□□□□□ -1.14
CPSF7-213ENST00000494016 ANKLE2Q86XL3 938 aa7.9□□□□□ -1.14
CPSF7-213ENST00000494016 RNF135Q8IUD6 432 aa7.9□□□□□ -1.14
CPSF7-213ENST00000494016 CCDC146Q8IYE0 955 aa7.9□□□□□ -1.14
CPSF7-213ENST00000494016 THEMISQ8N1K5 641 aaPredicted RBP7.9□□□□□ -1.14
CPSF7-213ENST00000494016 SIRT1Q96EB6 747 aa7.9□□□□□ -1.14
CPSF7-213ENST00000494016 CCDC85AQ96PX6 553 aaPredicted RBP7.9□□□□□ -1.14
CPSF7-213ENST00000494016 SHPRHQ149N8 1683 aa7.89□□□□□ -1.15
CPSF7-213ENST00000494016 NWD1Q149M9 1564 aa7.89□□□□□ -1.15
CPSF7-213ENST00000494016 METP08581 1390 aa7.89□□□□□ -1.15
CPSF7-213ENST00000494016 TMEM2Q9UHN6 1383 aa7.89□□□□□ -1.15
CPSF7-213ENST00000494016 CGNL1Q0VF96 1302 aa7.89□□□□□ -1.15
CPSF7-213ENST00000494016 LTKP29376 864 aa7.89□□□□□ -1.15
CPSF7-213ENST00000494016 TNNT2P45379 298 aaPredicted RBP7.89□□□□□ -1.15
CPSF7-213ENST00000494016 MTHFSP49914 203 aa7.89□□□□□ -1.15
CPSF7-213ENST00000494016 SRPK2P78362 688 aaKnown RBP7.89□□□□□ -1.15
CPSF7-213ENST00000494016 DUSP27Q5VZP5 1158 aa7.89□□□□□ -1.15
CPSF7-213ENST00000494016 ZNF784Q8NCA9 323 aaPredicted RBP7.89□□□□□ -1.15
CPSF7-213ENST00000494016 GLMNQ92990 594 aa7.89□□□□□ -1.15
CPSF7-213ENST00000494016 A0A1W2PP64 1363 aa7.88□□□□□ -1.15
CPSF7-213ENST00000494016 NINLQ9Y2I6 1382 aa7.88□□□□□ -1.15
CPSF7-213ENST00000494016 FYB1O15117 783 aa7.88□□□□□ -1.15
CPSF7-213ENST00000494016 LILRA1O75019 489 aa7.88□□□□□ -1.15
CPSF7-213ENST00000494016 NFATC2IPQ8NCF5 419 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms