RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 PNISRQ8TF01 805 aaKnown RBP10.63□□□□□ -0.71
HDAC6-234ENST00000493923 MASTLQ96GX5 879 aa10.63□□□□□ -0.71
HDAC6-234ENST00000493923 TSPYL4Q9UJ04 414 aa10.63□□□□□ -0.71
HDAC6-234ENST00000493923 ADAMTS8Q9UP79 889 aa10.63□□□□□ -0.71
HDAC6-234ENST00000493923 WDR90Q96KV7 1748 aa10.63□□□□□ -0.71
HDAC6-234ENST00000493923 PCNTO95613 3336 aa10.63□□□□□ -0.71
HDAC6-234ENST00000493923 KDM2BQ8NHM5 1336 aa10.62□□□□□ -0.71
HDAC6-234ENST00000493923 SNED1Q8TER0 1413 aa10.62□□□□□ -0.71
HDAC6-234ENST00000493923 NPHP1O15259 732 aa10.62□□□□□ -0.71
HDAC6-234ENST00000493923 NEFMP07197 916 aa10.62□□□□□ -0.71
HDAC6-234ENST00000493923 EIF2S2P20042 333 aaKnown RBP10.62□□□□□ -0.71
HDAC6-234ENST00000493923 CNKSR1Q969H4 720 aa10.62□□□□□ -0.71
HDAC6-234ENST00000493923 ZNF428Q96B54 188 aa10.62□□□□□ -0.71
HDAC6-234ENST00000493923 ZNF652Q9Y2D9 606 aa10.62□□□□□ -0.71
HDAC6-234ENST00000493923 COL4A5P29400 1685 aa10.62□□□□□ -0.71
HDAC6-234ENST00000493923 ERVV-1B6SEH8 477 aa10.61□□□□□ -0.71
HDAC6-234ENST00000493923 NTSR2O95665 410 aa10.61□□□□□ -0.71
HDAC6-234ENST00000493923 POTEIP0CG38 1075 aa10.61□□□□□ -0.71
HDAC6-234ENST00000493923 POTEJP0CG39 1038 aa10.61□□□□□ -0.71
HDAC6-234ENST00000493923 NPR1P16066 1061 aa10.61□□□□□ -0.71
HDAC6-234ENST00000493923 CCDC184Q52MB2 194 aa10.61□□□□□ -0.71
HDAC6-234ENST00000493923 ZNF34Q8IZ26 560 aa10.61□□□□□ -0.71
HDAC6-234ENST00000493923 SYNE4Q8N205 404 aa10.61□□□□□ -0.71
HDAC6-234ENST00000493923 PRKRIP1Q9H875 184 aaPredicted RBP10.61□□□□□ -0.71
HDAC6-234ENST00000493923 ZNF277Q9NRM2 450 aaPredicted RBP10.61□□□□□ -0.71
HDAC6-234ENST00000493923 DAXXQ9UER7 740 aaPredicted RBP10.61□□□□□ -0.71
HDAC6-234ENST00000493923 PDZRN3Q9UPQ7 1066 aa10.61□□□□□ -0.71
HDAC6-234ENST00000493923 LTBP3Q9NS15 1303 aa10.6□□□□□ -0.71
HDAC6-234ENST00000493923 TAF1P21675 1872 aa10.6□□□□□ -0.71
HDAC6-234ENST00000493923 SPDYE2BA6NHP3 402 aa10.6□□□□□ -0.71
HDAC6-234ENST00000493923 CHL1O00533 1208 aa10.6□□□□□ -0.71
HDAC6-234ENST00000493923 RGL2O15211 777 aa10.6□□□□□ -0.71
HDAC6-234ENST00000493923 DDNO94850 711 aaPredicted RBP10.6□□□□□ -0.71
HDAC6-234ENST00000493923 SPDYE6P0CI01 402 aa10.6□□□□□ -0.71
HDAC6-234ENST00000493923 SPDYE2Q495Y8 402 aa10.6□□□□□ -0.71
HDAC6-234ENST00000493923 TPTE2Q6XPS3 522 aa10.6□□□□□ -0.71
HDAC6-234ENST00000493923 TAOK3Q9H2K8 898 aa10.6□□□□□ -0.71
HDAC6-234ENST00000493923 LAMB2P55268 1798 aa10.6□□□□□ -0.71
HDAC6-234ENST00000493923 ZNF541Q9H0D2 1346 aa10.59□□□□□ -0.71
HDAC6-234ENST00000493923 ZC3H4Q9UPT8 1303 aaKnown RBP10.59□□□□□ -0.71
HDAC6-234ENST00000493923 CCER2I3L3R5 266 aa10.59□□□□□ -0.71
HDAC6-234ENST00000493923 APLP1P51693 650 aa10.59□□□□□ -0.71
HDAC6-234ENST00000493923 CRY2Q49AN0 593 aa10.59□□□□□ -0.71
HDAC6-234ENST00000493923 GIGYF2Q6Y7W6 1299 aaKnown RBP10.59□□□□□ -0.71
HDAC6-234ENST00000493923 KIF6Q6ZMV9 814 aa10.59□□□□□ -0.71
HDAC6-234ENST00000493923 C16orf71Q8IYS4 520 aaPredicted RBP10.59□□□□□ -0.71
HDAC6-234ENST00000493923 RUNDC1Q96C34 613 aa10.59□□□□□ -0.71
HDAC6-234ENST00000493923 PNNQ9H307 717 aaKnown RBP10.59□□□□□ -0.71
HDAC6-234ENST00000493923 LAS1LQ9Y4W2 734 aaKnown RBP10.59□□□□□ -0.71
HDAC6-234ENST00000493923 ANKRD36CQ5JPF3 1778 aa10.58□□□□□ -0.72
HDAC6-234ENST00000493923 COL4A1P02462 1669 aa10.58□□□□□ -0.72
HDAC6-234ENST00000493923 VEGFAP15692 232 aaPredicted RBP10.58□□□□□ -0.72
HDAC6-234ENST00000493923 FSTL1Q12841 308 aa10.58□□□□□ -0.72
HDAC6-234ENST00000493923 AIMP1Q12904 312 aaKnown RBP10.58□□□□□ -0.72
HDAC6-234ENST00000493923 GLIPR1L2Q4G1C9 344 aa10.58□□□□□ -0.72
HDAC6-234ENST00000493923 CCDC93Q567U6 631 aa10.58□□□□□ -0.72
HDAC6-234ENST00000493923 XAGE3Q8WTP9 111 aa10.58□□□□□ -0.72
HDAC6-234ENST00000493923 NOP58Q9Y2X3 529 aaKnown RBP10.58□□□□□ -0.72
HDAC6-234ENST00000493923 ERBB4Q15303 1308 aa10.58□□□□□ -0.72
HDAC6-234ENST00000493923 TCERG1O14776 1098 aaKnown RBP10.57□□□□□ -0.72
HDAC6-234ENST00000493923 FKBP4Q02790 459 aaKnown RBP eCLIP10.57□□□□□ -0.72
HDAC6-234ENST00000493923 COPS6Q7L5N1 327 aa10.57□□□□□ -0.72
HDAC6-234ENST00000493923 SALL2Q9Y467 1007 aaPredicted RBP10.57□□□□□ -0.72
HDAC6-234ENST00000493923 IBTKQ9P2D0 1353 aaPredicted RBP10.56□□□□□ -0.72
HDAC6-234ENST00000493923 GTF2E1P29083 439 aaPredicted RBP10.56□□□□□ -0.72
HDAC6-234ENST00000493923 HOXA10P31260 410 aaPredicted RBP10.56□□□□□ -0.72
HDAC6-234ENST00000493923 WDR43Q15061 677 aaKnown RBP eCLIP10.56□□□□□ -0.72
HDAC6-234ENST00000493923 SMC1BQ8NDV3 1235 aa10.56□□□□□ -0.72
HDAC6-234ENST00000493923 BABAM1Q9NWV8 329 aa10.56□□□□□ -0.72
HDAC6-234ENST00000493923 CHPF2Q9P2E5 772 aa10.56□□□□□ -0.72
HDAC6-234ENST00000493923 RIC1Q4ADV7 1423 aa10.56□□□□□ -0.72
HDAC6-234ENST00000493923 LTBP1Q14766 1721 aa10.55□□□□□ -0.72
HDAC6-234ENST00000493923 APAF1O14727 1248 aa10.55□□□□□ -0.72
HDAC6-234ENST00000493923 ZNF853P0CG23 659 aa10.55□□□□□ -0.72
HDAC6-234ENST00000493923 HCLS1P14317 486 aaPredicted RBP10.55□□□□□ -0.72
HDAC6-234ENST00000493923 LMOD3Q0VAK6 560 aa10.55□□□□□ -0.72
HDAC6-234ENST00000493923 NLRP10Q86W26 655 aa10.55□□□□□ -0.72
HDAC6-234ENST00000493923 NYXQ9GZU5 481 aa10.55□□□□□ -0.72
HDAC6-234ENST00000493923 DDX21Q9NR30 783 aaKnown RBP eCLIP10.55□□□□□ -0.72
HDAC6-234ENST00000493923 MBIPQ9NS73 344 aa10.55□□□□□ -0.72
HDAC6-234ENST00000493923 PITPNM1O00562 1244 aa10.54□□□□□ -0.72
HDAC6-234ENST00000493923 IARSP41252 1262 aaKnown RBP10.54□□□□□ -0.72
HDAC6-234ENST00000493923 SOGA3Q5TF21 947 aa10.54□□□□□ -0.72
HDAC6-234ENST00000493923 DPY19L2Q6NUT2 758 aa10.54□□□□□ -0.72
HDAC6-234ENST00000493923 DDX60Q8IY21 1712 aaKnown RBP10.54□□□□□ -0.72
HDAC6-234ENST00000493923 KLRG1Q96E93 195 aa10.54□□□□□ -0.72
HDAC6-234ENST00000493923 ABCC4O15439 1325 aa10.54□□□□□ -0.72
HDAC6-234ENST00000493923 ADAMTSL1Q8N6G6 1762 aa10.53□□□□□ -0.72
HDAC6-234ENST00000493923 FZD9O00144 591 aa10.53□□□□□ -0.72
HDAC6-234ENST00000493923 ALDH1B1P30837 517 aa10.53□□□□□ -0.72
HDAC6-234ENST00000493923 TCIRG1Q13488 830 aa10.53□□□□□ -0.72
HDAC6-234ENST00000493923 PARP10Q53GL7 1025 aa10.53□□□□□ -0.72
HDAC6-234ENST00000493923 SLC10A5Q5PT55 438 aa10.53□□□□□ -0.72
HDAC6-234ENST00000493923 DUSP27Q5VZP5 1158 aa10.53□□□□□ -0.72
HDAC6-234ENST00000493923 RPGRQ92834 1020 aaKnown RBP10.53□□□□□ -0.72
HDAC6-234ENST00000493923 L3MBTL3Q96JM7 780 aaPredicted RBP10.53□□□□□ -0.72
HDAC6-234ENST00000493923 PKNOX2Q96KN3 472 aa10.53□□□□□ -0.72
HDAC6-234ENST00000493923 CRAMP1Q96RY5 1269 aa10.53□□□□□ -0.72
HDAC6-234ENST00000493923 UTP14AQ9BVJ6 771 aaKnown RBP10.53□□□□□ -0.72
HDAC6-234ENST00000493923 TAF1DQ9H5J8 278 aaPredicted RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms