RNA–Protein interactions for RNA: ENST00000493521.5

SOX2-OT-215, SOX2 overlapping transcript, humanhuman

TSL 3 BASIC

Gene SOX2-OT, Length 1,239 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-215ENST00000493521 MAPK8IP3Q9UPT6 1336 aa13.39□□□□□ -0.27
SOX2-OT-215ENST00000493521 LAMB2P55268 1798 aa13.38□□□□□ -0.27
SOX2-OT-215ENST00000493521 FKBP4Q02790 459 aaKnown RBP eCLIP13.38□□□□□ -0.27
SOX2-OT-215ENST00000493521 CRY2Q49AN0 593 aa13.38□□□□□ -0.27
SOX2-OT-215ENST00000493521 CCDC93Q567U6 631 aa13.38□□□□□ -0.27
SOX2-OT-215ENST00000493521 JMYQ8N9B5 988 aa13.38□□□□□ -0.27
SOX2-OT-215ENST00000493521 PNISRQ8TF01 805 aaKnown RBP13.38□□□□□ -0.27
SOX2-OT-215ENST00000493521 PDZRN3Q9UPQ7 1066 aa13.38□□□□□ -0.27
SOX2-OT-215ENST00000493521 ERVV-1B6SEH8 477 aa13.37□□□□□ -0.27
SOX2-OT-215ENST00000493521 FMR1Q06787 632 aaKnown RBP eCLIP13.37□□□□□ -0.27
SOX2-OT-215ENST00000493521 ADAMTSL1Q8N6G6 1762 aa13.36□□□□□ -0.27
SOX2-OT-215ENST00000493521 AIMP1Q12904 312 aaKnown RBP13.36□□□□□ -0.27
SOX2-OT-215ENST00000493521 DPY19L2Q6NUT2 758 aa13.36□□□□□ -0.27
SOX2-OT-215ENST00000493521 ADAMTS8Q9UP79 889 aa13.36□□□□□ -0.27
SOX2-OT-215ENST00000493521 RNF123Q5XPI4 1314 aa13.36□□□□□ -0.27
SOX2-OT-215ENST00000493521 ANKRD36CQ5JPF3 1778 aa13.35□□□□□ -0.27
SOX2-OT-215ENST00000493521 NEFMP07197 916 aa13.35□□□□□ -0.27
SOX2-OT-215ENST00000493521 GTF2E1P29083 439 aaPredicted RBP13.35□□□□□ -0.27
SOX2-OT-215ENST00000493521 GIGYF2Q6Y7W6 1299 aaKnown RBP13.35□□□□□ -0.27
SOX2-OT-215ENST00000493521 KIF6Q6ZMV9 814 aa13.35□□□□□ -0.27
SOX2-OT-215ENST00000493521 COPS6Q7L5N1 327 aa13.35□□□□□ -0.27
SOX2-OT-215ENST00000493521 XAGE3Q8WTP9 111 aa13.35□□□□□ -0.27
SOX2-OT-215ENST00000493521 TAF1DQ9H5J8 278 aaPredicted RBP13.35□□□□□ -0.27
SOX2-OT-215ENST00000493521 RIC1Q4ADV7 1423 aa13.35□□□□□ -0.27
SOX2-OT-215ENST00000493521 RGL2O15211 777 aa13.34□□□□□ -0.27
SOX2-OT-215ENST00000493521 IARSP41252 1262 aaKnown RBP13.34□□□□□ -0.27
SOX2-OT-215ENST00000493521 HNRNPUQ00839 825 aaKnown RBP eCLIP13.34□□□□□ -0.27
SOX2-OT-215ENST00000493521 CHADLQ6NUI6 762 aa13.34□□□□□ -0.27
SOX2-OT-215ENST00000493521 MKRN1Q9UHC7 482 aaKnown RBP13.34□□□□□ -0.27
SOX2-OT-215ENST00000493521 LAS1LQ9Y4W2 734 aaKnown RBP13.34□□□□□ -0.27
SOX2-OT-215ENST00000493521 FZD9O00144 591 aa13.33□□□□□ -0.28
SOX2-OT-215ENST00000493521 CHL1O00533 1208 aa13.33□□□□□ -0.28
SOX2-OT-215ENST00000493521 HCLS1P14317 486 aaPredicted RBP13.33□□□□□ -0.28
SOX2-OT-215ENST00000493521 EAPPQ56P03 285 aaPredicted RBP13.33□□□□□ -0.28
SOX2-OT-215ENST00000493521 L3MBTL3Q96JM7 780 aaPredicted RBP13.33□□□□□ -0.28
SOX2-OT-215ENST00000493521 SCN4AP35499 1836 aa13.32□□□□□ -0.28
SOX2-OT-215ENST00000493521 PPEF1O14829 653 aaPredicted RBP13.32□□□□□ -0.28
SOX2-OT-215ENST00000493521 ITGBL1O95965 494 aaPredicted RBP13.32□□□□□ -0.28
SOX2-OT-215ENST00000493521 HSPA1AP0DMV8 641 aaKnown RBP13.32□□□□□ -0.28
SOX2-OT-215ENST00000493521 HSPA1BP0DMV9 641 aaKnown RBP13.32□□□□□ -0.28
SOX2-OT-215ENST00000493521 HOXA10P31260 410 aaPredicted RBP13.32□□□□□ -0.28
SOX2-OT-215ENST00000493521 SOGA3Q5TF21 947 aa13.32□□□□□ -0.28
SOX2-OT-215ENST00000493521 CHPF2Q9P2E5 772 aa13.32□□□□□ -0.28
SOX2-OT-215ENST00000493521 DDX60Q8IY21 1712 aaKnown RBP13.32□□□□□ -0.28
SOX2-OT-215ENST00000493521 ABCC4O15439 1325 aa13.32□□□□□ -0.28
SOX2-OT-215ENST00000493521 PASKQ96RG2 1323 aa13.32□□□□□ -0.28
SOX2-OT-215ENST00000493521 IBTKQ9P2D0 1353 aaPredicted RBP13.32□□□□□ -0.28
SOX2-OT-215ENST00000493521 ALDH1B1P30837 517 aa13.31□□□□□ -0.28
SOX2-OT-215ENST00000493521 MAP1SQ66K74 1059 aaPredicted RBP13.31□□□□□ -0.28
SOX2-OT-215ENST00000493521 NLRP10Q86W26 655 aa13.31□□□□□ -0.28
SOX2-OT-215ENST00000493521 RPGRQ92834 1020 aaKnown RBP13.31□□□□□ -0.28
SOX2-OT-215ENST00000493521 NYXQ9GZU5 481 aa13.31□□□□□ -0.28
SOX2-OT-215ENST00000493521 EPS15P42566 896 aa13.3□□□□□ -0.28
SOX2-OT-215ENST00000493521 RTKN2Q8IZC4 609 aa13.3□□□□□ -0.28
SOX2-OT-215ENST00000493521 RUNDC1Q96C34 613 aa13.3□□□□□ -0.28
SOX2-OT-215ENST00000493521 PSMD1Q99460 953 aa13.3□□□□□ -0.28
SOX2-OT-215ENST00000493521 GJA3Q9Y6H8 435 aa13.3□□□□□ -0.28
SOX2-OT-215ENST00000493521 ERBB4Q15303 1308 aa13.3□□□□□ -0.28
SOX2-OT-215ENST00000493521 DUOX1Q9NRD9 1551 aa13.29□□□□□ -0.28
SOX2-OT-215ENST00000493521 SHTN1A0MZ66 631 aa13.29□□□□□ -0.28
SOX2-OT-215ENST00000493521 ATP5J2-PTCD1G3V325 749 aa13.29□□□□□ -0.28
SOX2-OT-215ENST00000493521 EPHX2P34913 555 aa13.29□□□□□ -0.28
SOX2-OT-215ENST00000493521 SCNN1DP51172 638 aa13.29□□□□□ -0.28
SOX2-OT-215ENST00000493521 AOC3Q16853 763 aa13.29□□□□□ -0.28
SOX2-OT-215ENST00000493521 CRAMP1Q96RY5 1269 aa13.29□□□□□ -0.28
SOX2-OT-215ENST00000493521 UTP14AQ9BVJ6 771 aaKnown RBP13.29□□□□□ -0.28
SOX2-OT-215ENST00000493521 HACL1Q9UJ83 578 aa13.29□□□□□ -0.28
SOX2-OT-215ENST00000493521 TCIRG1Q13488 830 aa13.28□□□□□ -0.28
SOX2-OT-215ENST00000493521 WDR43Q15061 677 aaKnown RBP eCLIP13.28□□□□□ -0.28
SOX2-OT-215ENST00000493521 RTL5Q5HYW3 569 aaPredicted RBP13.28□□□□□ -0.28
SOX2-OT-215ENST00000493521 SLC10A5Q5PT55 438 aa13.28□□□□□ -0.28
SOX2-OT-215ENST00000493521 LDHDQ86WU2 507 aa13.28□□□□□ -0.28
SOX2-OT-215ENST00000493521 RBM17Q96I25 401 aaKnown RBP13.28□□□□□ -0.28
SOX2-OT-215ENST00000493521 PNNQ9H307 717 aaKnown RBP13.28□□□□□ -0.28
SOX2-OT-215ENST00000493521 MBIPQ9NS73 344 aa13.28□□□□□ -0.28
SOX2-OT-215ENST00000493521 ELL2O00472 640 aaPredicted RBP13.27□□□□□ -0.29
SOX2-OT-215ENST00000493521 APAF1O14727 1248 aa13.27□□□□□ -0.29
SOX2-OT-215ENST00000493521 CAPN15O75808 1086 aa13.27□□□□□ -0.29
SOX2-OT-215ENST00000493521 DLK2Q6UY11 383 aa13.27□□□□□ -0.29
SOX2-OT-215ENST00000493521 PPP1R42Q7Z4L9 355 aa13.27□□□□□ -0.29
SOX2-OT-215ENST00000493521 LARGE2Q8N3Y3 721 aa13.27□□□□□ -0.29
SOX2-OT-215ENST00000493521 JARID2Q92833 1246 aaPredicted RBP13.27□□□□□ -0.29
SOX2-OT-215ENST00000493521 GPR101Q96P66 508 aaPredicted RBP13.27□□□□□ -0.29
SOX2-OT-215ENST00000493521 PHAXQ9H814 394 aaKnown RBP13.27□□□□□ -0.29
SOX2-OT-215ENST00000493521 DDX21Q9NR30 783 aaKnown RBP eCLIP13.27□□□□□ -0.29
SOX2-OT-215ENST00000493521 CREBZFQ9NS37 354 aa13.27□□□□□ -0.29
SOX2-OT-215ENST00000493521 CLEC11AQ9Y240 323 aa13.27□□□□□ -0.29
SOX2-OT-215ENST00000493521 IQCA1LA6NCM1 817 aa13.26□□□□□ -0.29
SOX2-OT-215ENST00000493521 TRAF5O00463 557 aa13.26□□□□□ -0.29
SOX2-OT-215ENST00000493521 VEGFBP49765 207 aa13.26□□□□□ -0.29
SOX2-OT-215ENST00000493521 PARP10Q53GL7 1025 aa13.26□□□□□ -0.29
SOX2-OT-215ENST00000493521 HDGFL1Q5TGJ6 251 aa13.26□□□□□ -0.29
SOX2-OT-215ENST00000493521 DUSP27Q5VZP5 1158 aa13.26□□□□□ -0.29
SOX2-OT-215ENST00000493521 GPC2Q8N158 579 aa13.26□□□□□ -0.29
SOX2-OT-215ENST00000493521 FAM89AQ96GI7 184 aa13.26□□□□□ -0.29
SOX2-OT-215ENST00000493521 NLRP3Q96P20 1036 aa13.26□□□□□ -0.29
SOX2-OT-215ENST00000493521 TRMT112Q9UI30 125 aaKnown RBP13.26□□□□□ -0.29
SOX2-OT-215ENST00000493521 ATP6V0A2Q9Y487 856 aa13.26□□□□□ -0.29
SOX2-OT-215ENST00000493521 CNTNAP1P78357 1384 aa13.25□□□□□ -0.29
SOX2-OT-215ENST00000493521 YDJCA8MPS7 323 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms