RNA–Protein interactions for RNA: ENST00000493455.6

HPS4-216, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 986 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-216ENST00000493455 POLD1P28340 1107 aa19.92■□□□□ 0.78
HPS4-216ENST00000493455 GTF2E1P29083 439 aaPredicted RBP19.92■□□□□ 0.78
HPS4-216ENST00000493455 CCT4P50991 539 aaKnown RBP19.92■□□□□ 0.78
HPS4-216ENST00000493455 SUSD4Q5VX71 490 aa19.92■□□□□ 0.78
HPS4-216ENST00000493455 NLRP10Q86W26 655 aa19.92■□□□□ 0.78
HPS4-216ENST00000493455 CCDC24Q8N4L8 307 aa19.92■□□□□ 0.78
HPS4-216ENST00000493455 SERPINB2P05120 415 aa19.91■□□□□ 0.78
HPS4-216ENST00000493455 TM4SF1P30408 202 aa19.91■□□□□ 0.78
HPS4-216ENST00000493455 IRX6P78412 446 aaPredicted RBP19.91■□□□□ 0.78
HPS4-216ENST00000493455 PARP10Q53GL7 1025 aa19.91■□□□□ 0.78
HPS4-216ENST00000493455 PPP1R42Q7Z4L9 355 aa19.91■□□□□ 0.78
HPS4-216ENST00000493455 NUTM1Q86Y26 1132 aa19.91■□□□□ 0.78
HPS4-216ENST00000493455 TRMT112Q9UI30 125 aaKnown RBP19.91■□□□□ 0.78
HPS4-216ENST00000493455 COG6Q9Y2V7 657 aa19.91■□□□□ 0.78
HPS4-216ENST00000493455 POLRMTO00411 1230 aaKnown RBP19.9■□□□□ 0.78
HPS4-216ENST00000493455 RGL2O15211 777 aa19.9■□□□□ 0.78
HPS4-216ENST00000493455 KLHL34Q8N239 644 aa19.9■□□□□ 0.78
HPS4-216ENST00000493455 CCDC191Q8NCU4 936 aa19.9■□□□□ 0.78
HPS4-216ENST00000493455 UTP14AQ9BVJ6 771 aaKnown RBP19.9■□□□□ 0.78
HPS4-216ENST00000493455 ALDH1L1O75891 902 aa19.89■□□□□ 0.77
HPS4-216ENST00000493455 GCKRQ14397 625 aa19.89■□□□□ 0.77
HPS4-216ENST00000493455 CNBD1Q8NA66 436 aa19.89■□□□□ 0.77
HPS4-216ENST00000493455 C9orf78Q9NZ63 289 aaPredicted RBP19.89■□□□□ 0.77
HPS4-216ENST00000493455 FAM89AQ96GI7 184 aa19.88■□□□□ 0.77
HPS4-216ENST00000493455 NYXQ9GZU5 481 aa19.88■□□□□ 0.77
HPS4-216ENST00000493455 SPON1Q9HCB6 807 aa19.88■□□□□ 0.77
HPS4-216ENST00000493455 NTSR2O95665 410 aa19.87■□□□□ 0.77
HPS4-216ENST00000493455 ERFEQ4G0M1 354 aa19.87■□□□□ 0.77
HPS4-216ENST00000493455 INTS3Q68E01 1043 aaKnown RBP19.87■□□□□ 0.77
HPS4-216ENST00000493455 TPTE2Q6XPS3 522 aa19.87■□□□□ 0.77
HPS4-216ENST00000493455 UBE3BQ7Z3V4 1068 aa19.87■□□□□ 0.77
HPS4-216ENST00000493455 SYNE4Q8N205 404 aa19.87■□□□□ 0.77
HPS4-216ENST00000493455 ST5P78524 1137 aa19.86■□□□□ 0.77
HPS4-216ENST00000493455 PDE3AQ14432 1141 aa19.86■□□□□ 0.77
HPS4-216ENST00000493455 PRR5LQ6MZQ0 368 aa19.86■□□□□ 0.77
HPS4-216ENST00000493455 PPP1R1BQ9UD71 204 aaPredicted RBP19.86■□□□□ 0.77
HPS4-216ENST00000493455 NRXN2Q9P2S2 1712 aa19.85■□□□□ 0.77
HPS4-216ENST00000493455 SH3TC1Q8TE82 1336 aa19.85■□□□□ 0.77
HPS4-216ENST00000493455 TRIM28Q13263 835 aaKnown RBP19.85■□□□□ 0.77
HPS4-216ENST00000493455 MVPQ14764 893 aaKnown RBP19.85■□□□□ 0.77
HPS4-216ENST00000493455 DDX60Q8IY21 1712 aaKnown RBP19.85■□□□□ 0.77
HPS4-216ENST00000493455 ABCC12Q96J65 1359 aa19.84■□□□□ 0.77
HPS4-216ENST00000493455 RNF123Q5XPI4 1314 aa19.84■□□□□ 0.77
HPS4-216ENST00000493455 GRM8O00222 908 aa19.84■□□□□ 0.77
HPS4-216ENST00000493455 PCCAP05165 728 aaPredicted RBP19.84■□□□□ 0.77
HPS4-216ENST00000493455 HCLS1P14317 486 aaPredicted RBP19.84■□□□□ 0.77
HPS4-216ENST00000493455 ZBTB38Q8NAP3 1195 aaPredicted RBP19.84■□□□□ 0.77
HPS4-216ENST00000493455 CRBNQ96SW2 442 aa19.84■□□□□ 0.77
HPS4-216ENST00000493455 MEIS3Q99687 375 aa19.84■□□□□ 0.77
HPS4-216ENST00000493455 LAMB2P55268 1798 aa19.83■□□□□ 0.77
HPS4-216ENST00000493455 NBPF7P0C2Y1 421 aaPredicted RBP19.83■□□□□ 0.77
HPS4-216ENST00000493455 PTGER2P43116 358 aa19.83■□□□□ 0.77
HPS4-216ENST00000493455 TNRC6CQ9HCJ0 1690 aaKnown RBP19.83■□□□□ 0.76
HPS4-216ENST00000493455 ANKRD31Q8N7Z5 1873 aa19.83■□□□□ 0.76
HPS4-216ENST00000493455 IBTKQ9P2D0 1353 aaPredicted RBP19.83■□□□□ 0.76
HPS4-216ENST00000493455 MYH3P11055 1940 aa19.82■□□□□ 0.76
HPS4-216ENST00000493455 IRS4O14654 1257 aaPredicted RBP19.82■□□□□ 0.76
HPS4-216ENST00000493455 UBTFL1P0CB47 393 aaPredicted RBP19.82■□□□□ 0.76
HPS4-216ENST00000493455 USP44Q9H0E7 712 aa19.82■□□□□ 0.76
HPS4-216ENST00000493455 H7C1W4 665 aa19.81■□□□□ 0.76
HPS4-216ENST00000493455 CCDC85AQ96PX6 553 aaPredicted RBP19.81■□□□□ 0.76
HPS4-216ENST00000493455 C1orf115Q9H7X2 142 aa19.81■□□□□ 0.76
HPS4-216ENST00000493455 DDX19BQ9UMR2 479 aa19.81■□□□□ 0.76
HPS4-216ENST00000493455 SUCLG2Q96I99 432 aa19.8■□□□□ 0.76
HPS4-216ENST00000493455 SGIP1Q9BQI5 828 aa19.8■□□□□ 0.76
HPS4-216ENST00000493455 GNAI3P08754 354 aa19.79■□□□□ 0.76
HPS4-216ENST00000493455 CHMP3Q9Y3E7 222 aa19.79■□□□□ 0.76
HPS4-216ENST00000493455 CDHR2Q9BYE9 1310 aa19.78■□□□□ 0.76
HPS4-216ENST00000493455 CACNA1SQ13698 1873 aa19.78■□□□□ 0.76
HPS4-216ENST00000493455 NEFLP07196 543 aa19.78■□□□□ 0.76
HPS4-216ENST00000493455 CASP7P55210 303 aa19.78■□□□□ 0.76
HPS4-216ENST00000493455 LRRFIP2Q9Y608 721 aaKnown RBP19.78■□□□□ 0.76
HPS4-216ENST00000493455 C10orf71Q711Q0 1435 aa19.77■□□□□ 0.76
HPS4-216ENST00000493455 PDE8AO60658 829 aa19.77■□□□□ 0.76
HPS4-216ENST00000493455 C3orf67Q6ZVT6 689 aa19.77■□□□□ 0.76
HPS4-216ENST00000493455 EXOC6Q8TAG9 804 aa19.77■□□□□ 0.76
HPS4-216ENST00000493455 NLRP3Q96P20 1036 aa19.77■□□□□ 0.76
HPS4-216ENST00000493455 COL11A2P13942 1736 aaPredicted RBP19.76■□□□□ 0.75
HPS4-216ENST00000493455 ZBTB7BO15156 539 aaPredicted RBP19.76■□□□□ 0.75
HPS4-216ENST00000493455 KIF13BQ9NQT8 1826 aa19.76■□□□□ 0.75
HPS4-216ENST00000493455 UTYO14607 1347 aa19.76■□□□□ 0.75
HPS4-216ENST00000493455 TAF1P21675 1872 aa19.75■□□□□ 0.75
HPS4-216ENST00000493455 SPEF2Q9C093 1822 aa19.75■□□□□ 0.75
HPS4-216ENST00000493455 GNAI2P04899 355 aa19.75■□□□□ 0.75
HPS4-216ENST00000493455 HSP90B1P14625 803 aaKnown RBP19.75■□□□□ 0.75
HPS4-216ENST00000493455 EPHA10Q5JZY3 1008 aa19.75■□□□□ 0.75
HPS4-216ENST00000493455 C2CD5Q86YS7 1000 aa19.75■□□□□ 0.75
HPS4-216ENST00000493455 BRIP1Q9BX63 1249 aa19.75■□□□□ 0.75
HPS4-216ENST00000493455 BICC1Q9H694 974 aaKnown RBP19.75■□□□□ 0.75
HPS4-216ENST00000493455 CHRNA5P30532 468 aa19.74■□□□□ 0.75
HPS4-216ENST00000493455 PDE6BP35913 854 aa19.74■□□□□ 0.75
HPS4-216ENST00000493455 CTSWP56202 376 aa19.74■□□□□ 0.75
HPS4-216ENST00000493455 SLC10A5Q5PT55 438 aa19.74■□□□□ 0.75
HPS4-216ENST00000493455 RPGRQ92834 1020 aaKnown RBP19.74■□□□□ 0.75
HPS4-216ENST00000493455 CHMP4BQ9H444 224 aaKnown RBP19.74■□□□□ 0.75
HPS4-216ENST00000493455 WWC3Q9ULE0 1092 aa19.74■□□□□ 0.75
HPS4-216ENST00000493455 LMBR1LQ6UX01 489 aa19.73■□□□□ 0.75
HPS4-216ENST00000493455 HDAC5Q9UQL6 1122 aa19.73■□□□□ 0.75
HPS4-216ENST00000493455 LRP5O75197 1615 aa19.73■□□□□ 0.75
HPS4-216ENST00000493455 FOXO4P98177 505 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms