RNA–Protein interactions for RNA: ENST00000492367.1

NUCB1-212, Transcript of nucleobindin 1, humanhuman

TSL 2

Gene NUCB1, Length 1,515 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB1-212ENST00000492367 SRGAP3O43295 1099 aa23.69■■□□□ 1.38
NUCB1-212ENST00000492367 PNMA6EA0A0J9YXQ4 647 aa23.68■■□□□ 1.38
NUCB1-212ENST00000492367 ZPR1O75312 459 aa23.68■■□□□ 1.38
NUCB1-212ENST00000492367 GPTP24298 496 aa23.68■■□□□ 1.38
NUCB1-212ENST00000492367 CASP7P55210 303 aa23.68■■□□□ 1.38
NUCB1-212ENST00000492367 POLA2Q14181 598 aa23.68■■□□□ 1.38
NUCB1-212ENST00000492367 TRAPPC3LQ5T215 181 aa23.68■■□□□ 1.38
NUCB1-212ENST00000492367 ZBTB38Q8NAP3 1195 aaPredicted RBP23.68■■□□□ 1.38
NUCB1-212ENST00000492367 BICC1Q9H694 974 aaKnown RBP23.68■■□□□ 1.38
NUCB1-212ENST00000492367 NUCB1Q02818 461 aa23.67■■□□□ 1.38
NUCB1-212ENST00000492367 CDHR2Q9BYE9 1310 aa23.67■■□□□ 1.38
NUCB1-212ENST00000492367 HSP90AB4PQ58FF6 505 aa23.66■■□□□ 1.38
NUCB1-212ENST00000492367 SSFA2P28290 1259 aa23.65■■□□□ 1.38
NUCB1-212ENST00000492367 SF3B2Q13435 895 aaKnown RBP23.65■■□□□ 1.38
NUCB1-212ENST00000492367 ANKRD45Q5TZF3 282 aa23.65■■□□□ 1.38
NUCB1-212ENST00000492367 CHD1LQ86WJ1 897 aa23.65■■□□□ 1.38
NUCB1-212ENST00000492367 HSP90B1P14625 803 aaKnown RBP23.64■■□□□ 1.38
NUCB1-212ENST00000492367 RFC4P35249 363 aa23.64■■□□□ 1.38
NUCB1-212ENST00000492367 RABL6Q3YEC7 729 aaPredicted RBP23.64■■□□□ 1.38
NUCB1-212ENST00000492367 KAZALD1Q96I82 304 aa23.64■■□□□ 1.38
NUCB1-212ENST00000492367 TRMT112Q9UI30 125 aaKnown RBP23.64■■□□□ 1.38
NUCB1-212ENST00000492367 NIP7Q9Y221 180 aaKnown RBP eCLIP23.64■■□□□ 1.37
NUCB1-212ENST00000492367 UBN2Q6ZU65 1347 aa23.63■■□□□ 1.37
NUCB1-212ENST00000492367 RAB11FIP3O75154 756 aa23.63■■□□□ 1.37
NUCB1-212ENST00000492367 PROM2Q8N271 834 aa23.63■■□□□ 1.37
NUCB1-212ENST00000492367 ARHGEF1Q92888 912 aaKnown RBP23.63■■□□□ 1.37
NUCB1-212ENST00000492367 PLA2G12BQ9BX93 195 aa23.63■■□□□ 1.37
NUCB1-212ENST00000492367 USP42Q9H9J4 1324 aaKnown RBP23.62■■□□□ 1.37
NUCB1-212ENST00000492367 PHF14O94880 888 aa23.62■■□□□ 1.37
NUCB1-212ENST00000492367 RGS3P49796 1198 aa23.62■■□□□ 1.37
NUCB1-212ENST00000492367 USPL1Q5W0Q7 1092 aa23.62■■□□□ 1.37
NUCB1-212ENST00000492367 JARID2Q92833 1246 aaPredicted RBP23.62■■□□□ 1.37
NUCB1-212ENST00000492367 UTP14AQ9BVJ6 771 aaKnown RBP23.62■■□□□ 1.37
NUCB1-212ENST00000492367 MYH3P11055 1940 aa23.61■■□□□ 1.37
NUCB1-212ENST00000492367 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.6■■□□□ 1.37
NUCB1-212ENST00000492367 SURF6O75683 361 aaKnown RBP23.6■■□□□ 1.37
NUCB1-212ENST00000492367 RTL5Q5HYW3 569 aaPredicted RBP23.6■■□□□ 1.37
NUCB1-212ENST00000492367 EPHA10Q5JZY3 1008 aa23.6■■□□□ 1.37
NUCB1-212ENST00000492367 EXOC6BQ9Y2D4 811 aa23.6■■□□□ 1.37
NUCB1-212ENST00000492367 LAMB2P55268 1798 aa23.6■■□□□ 1.37
NUCB1-212ENST00000492367 SH3TC1Q8TE82 1336 aa23.6■■□□□ 1.37
NUCB1-212ENST00000492367 BAG6P46379 1132 aa23.59■■□□□ 1.37
NUCB1-212ENST00000492367 COL24A1Q17RW2 1714 aa23.59■■□□□ 1.37
NUCB1-212ENST00000492367 ERC1Q8IUD2 1116 aa23.59■■□□□ 1.37
NUCB1-212ENST00000492367 FLAD1Q8NFF5 587 aa23.59■■□□□ 1.37
NUCB1-212ENST00000492367 FAM89AQ96GI7 184 aa23.59■■□□□ 1.37
NUCB1-212ENST00000492367 LRRCC1Q9C099 1032 aa23.59■■□□□ 1.37
NUCB1-212ENST00000492367 LNPKQ9C0E8 428 aa23.59■■□□□ 1.37
NUCB1-212ENST00000492367 NOP58Q9Y2X3 529 aaKnown RBP23.59■■□□□ 1.37
NUCB1-212ENST00000492367 FOXO4P98177 505 aa23.59■■□□□ 1.37
NUCB1-212ENST00000492367 LMBR1LQ6UX01 489 aa23.59■■□□□ 1.37
NUCB1-212ENST00000492367 IRS4O14654 1257 aaPredicted RBP23.58■■□□□ 1.36
NUCB1-212ENST00000492367 OS9Q13438 667 aaPredicted RBP23.58■■□□□ 1.36
NUCB1-212ENST00000492367 SUSD4Q5VX71 490 aa23.58■■□□□ 1.36
NUCB1-212ENST00000492367 NYXQ9GZU5 481 aa23.58■■□□□ 1.36
NUCB1-212ENST00000492367 BCL2L12Q9HB09 334 aa23.58■■□□□ 1.36
NUCB1-212ENST00000492367 SRP68Q9UHB9 627 aaKnown RBP23.58■■□□□ 1.36
NUCB1-212ENST00000492367 CHMP3Q9Y3E7 222 aa23.58■■□□□ 1.36
NUCB1-212ENST00000492367 PDE8AO60658 829 aa23.57■■□□□ 1.36
NUCB1-212ENST00000492367 KIF1BPQ96EK5 621 aa23.57■■□□□ 1.36
NUCB1-212ENST00000492367 SETDB2Q96T68 719 aa23.57■■□□□ 1.36
NUCB1-212ENST00000492367 NTSR2O95665 410 aa23.56■■□□□ 1.36
NUCB1-212ENST00000492367 AKT1S1Q96B36 256 aa23.56■■□□□ 1.36
NUCB1-212ENST00000492367 TFCP2L1Q9NZI6 479 aa23.56■■□□□ 1.36
NUCB1-212ENST00000492367 G3BP1Q13283 466 aaKnown RBP eCLIP23.55■■□□□ 1.36
NUCB1-212ENST00000492367 TBC1D9BQ66K14 1250 aa23.55■■□□□ 1.36
NUCB1-212ENST00000492367 AMIGO3Q86WK7 504 aa23.55■■□□□ 1.36
NUCB1-212ENST00000492367 COPRSQ9NQ92 184 aa23.55■■□□□ 1.36
NUCB1-212ENST00000492367 APBB1O00213 710 aa23.54■■□□□ 1.36
NUCB1-212ENST00000492367 SMIM5Q71RC9 77 aa23.54■■□□□ 1.36
NUCB1-212ENST00000492367 SKAP1Q86WV1 359 aa23.54■■□□□ 1.36
NUCB1-212ENST00000492367 CCDC125Q86Z20 511 aa23.54■■□□□ 1.36
NUCB1-212ENST00000492367 CAMKK2Q96RR4 588 aa23.54■■□□□ 1.36
NUCB1-212ENST00000492367 TUBGCP6Q96RT7 1819 aa23.54■■□□□ 1.36
NUCB1-212ENST00000492367 PDE4AP27815 886 aa23.54■■□□□ 1.36
NUCB1-212ENST00000492367 CTSWP56202 376 aa23.54■■□□□ 1.36
NUCB1-212ENST00000492367 DDX60Q8IY21 1712 aaKnown RBP23.53■■□□□ 1.36
NUCB1-212ENST00000492367 FAM177BA6PVY3 158 aa23.53■■□□□ 1.36
NUCB1-212ENST00000492367 CSF1RP07333 972 aa23.53■■□□□ 1.36
NUCB1-212ENST00000492367 EN1Q05925 392 aaPredicted RBP23.53■■□□□ 1.36
NUCB1-212ENST00000492367 ZNF827Q17R98 1081 aa23.53■■□□□ 1.36
NUCB1-212ENST00000492367 CCDC57Q2TAC2 916 aa23.53■■□□□ 1.36
NUCB1-212ENST00000492367 BICDL1Q6ZP65 573 aa23.53■■□□□ 1.36
NUCB1-212ENST00000492367 RHPN1Q8TCX5 695 aa23.53■■□□□ 1.36
NUCB1-212ENST00000492367 CARMIL3Q8ND23 1372 aa23.52■■□□□ 1.36
NUCB1-212ENST00000492367 QSER1Q2KHR3 1735 aa23.52■■□□□ 1.36
NUCB1-212ENST00000492367 GTF2E1P29083 439 aaPredicted RBP23.52■■□□□ 1.36
NUCB1-212ENST00000492367 RFX5P48382 616 aaPredicted RBP23.52■■□□□ 1.36
NUCB1-212ENST00000492367 EZH2Q15910 746 aaKnown RBP23.52■■□□□ 1.36
NUCB1-212ENST00000492367 PA2G4Q9UQ80 394 aaKnown RBP23.51■■□□□ 1.35
NUCB1-212ENST00000492367 PTPN12Q05209 780 aaKnown RBP23.5■■□□□ 1.35
NUCB1-212ENST00000492367 TPTE2Q6XPS3 522 aa23.5■■□□□ 1.35
NUCB1-212ENST00000492367 NBPF5PQ86XG9 351 aaPredicted RBP23.5■■□□□ 1.35
NUCB1-212ENST00000492367 STK32BQ9NY57 414 aa23.5■■□□□ 1.35
NUCB1-212ENST00000492367 FBXO3Q9UK99 471 aa23.5■■□□□ 1.35
NUCB1-212ENST00000492367 GYS1P13807 737 aa23.49■■□□□ 1.35
NUCB1-212ENST00000492367 IFIT5Q13325 482 aaKnown RBP23.49■■□□□ 1.35
NUCB1-212ENST00000492367 TTLL11Q8NHH1 800 aa23.49■■□□□ 1.35
NUCB1-212ENST00000492367 SMARCA5O60264 1052 aaPredicted RBP23.49■■□□□ 1.35
NUCB1-212ENST00000492367 TAF7LQ5H9L4 462 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms