RNA–Protein interactions for RNA: ENST00000491335.1

NDUFB4-204, Transcript of NADH:ubiquinone oxidoreductase subunit B4, humanhuman

TSL 2

Gene NDUFB4, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB4-204ENST00000491335 C21orf2O43822 256 aa23.88■■□□□ 1.41
NDUFB4-204ENST00000491335 PRPF40BQ6NWY9 871 aaKnown RBP23.88■■□□□ 1.41
NDUFB4-204ENST00000491335 RIC3Q7Z5B4 369 aa23.88■■□□□ 1.41
NDUFB4-204ENST00000491335 ZNF428Q96B54 188 aa23.88■■□□□ 1.41
NDUFB4-204ENST00000491335 MYH16Q9H6N6 1097 aa23.88■■□□□ 1.41
NDUFB4-204ENST00000491335 ADCY9O60503 1353 aa23.88■■□□□ 1.41
NDUFB4-204ENST00000491335 SBF1O95248 1867 aa23.87■■□□□ 1.41
NDUFB4-204ENST00000491335 ZNF521Q96K83 1311 aa23.87■■□□□ 1.41
NDUFB4-204ENST00000491335 ATP5J2-PTCD1G3V325 749 aa23.87■■□□□ 1.41
NDUFB4-204ENST00000491335 VAMP4O75379 141 aa23.87■■□□□ 1.41
NDUFB4-204ENST00000491335 SLC10A5Q5PT55 438 aa23.87■■□□□ 1.41
NDUFB4-204ENST00000491335 MIER1Q8N108 512 aa23.87■■□□□ 1.41
NDUFB4-204ENST00000491335 ISCA1Q9BUE6 129 aa23.87■■□□□ 1.41
NDUFB4-204ENST00000491335 STK31Q9BXU1 1019 aa23.87■■□□□ 1.41
NDUFB4-204ENST00000491335 ARFGEF2Q9Y6D5 1785 aa23.86■■□□□ 1.41
NDUFB4-204ENST00000491335 RASSF7Q02833 373 aa23.86■■□□□ 1.41
NDUFB4-204ENST00000491335 CRY2Q49AN0 593 aa23.86■■□□□ 1.41
NDUFB4-204ENST00000491335 C9orf131Q5VYM1 1079 aa23.86■■□□□ 1.41
NDUFB4-204ENST00000491335 SYNE4Q8N205 404 aa23.86■■□□□ 1.41
NDUFB4-204ENST00000491335 TRMT112Q9UI30 125 aaKnown RBP23.86■■□□□ 1.41
NDUFB4-204ENST00000491335 RIC1Q4ADV7 1423 aa23.85■■□□□ 1.41
NDUFB4-204ENST00000491335 SLC4A2P04920 1241 aa23.84■■□□□ 1.41
NDUFB4-204ENST00000491335 C3orf67Q6ZVT6 689 aa23.84■■□□□ 1.41
NDUFB4-204ENST00000491335 RNF123Q5XPI4 1314 aa23.84■■□□□ 1.41
NDUFB4-204ENST00000491335 CCDC88AQ3V6T2 1871 aa23.83■■□□□ 1.41
NDUFB4-204ENST00000491335 NFKBIEO00221 500 aa23.83■■□□□ 1.41
NDUFB4-204ENST00000491335 DDX58O95786 925 aaKnown RBP23.83■■□□□ 1.41
NDUFB4-204ENST00000491335 ALDH1B1P30837 517 aa23.83■■□□□ 1.41
NDUFB4-204ENST00000491335 TRIM28Q13263 835 aaKnown RBP23.83■■□□□ 1.41
NDUFB4-204ENST00000491335 G2E3Q7L622 706 aa23.83■■□□□ 1.41
NDUFB4-204ENST00000491335 C7orf43Q8WVR3 580 aa23.83■■□□□ 1.41
NDUFB4-204ENST00000491335 RPGRQ92834 1020 aaKnown RBP23.83■■□□□ 1.41
NDUFB4-204ENST00000491335 NLRP3Q96P20 1036 aa23.83■■□□□ 1.41
NDUFB4-204ENST00000491335 RNF181Q9P0P0 153 aa23.83■■□□□ 1.41
NDUFB4-204ENST00000491335 HCLS1P14317 486 aaPredicted RBP23.82■■□□□ 1.4
NDUFB4-204ENST00000491335 HOXA10P31260 410 aaPredicted RBP23.82■■□□□ 1.4
NDUFB4-204ENST00000491335 SH3TC1Q8TE82 1336 aa23.82■■□□□ 1.4
NDUFB4-204ENST00000491335 CACNA1FO60840 1977 aa23.82■■□□□ 1.4
NDUFB4-204ENST00000491335 FER1L6Q2WGJ9 1857 aa23.81■■□□□ 1.4
NDUFB4-204ENST00000491335 PRELPP51888 382 aa23.81■■□□□ 1.4
NDUFB4-204ENST00000491335 ZNF526Q8TF50 670 aaPredicted RBP23.81■■□□□ 1.4
NDUFB4-204ENST00000491335 MYD88Q99836 296 aa23.81■■□□□ 1.4
NDUFB4-204ENST00000491335 KSR2Q6VAB6 950 aa23.8■■□□□ 1.4
NDUFB4-204ENST00000491335 FAM89AQ96GI7 184 aa23.8■■□□□ 1.4
NDUFB4-204ENST00000491335 METTL22Q9BUU2 404 aaPredicted RBP23.8■■□□□ 1.4
NDUFB4-204ENST00000491335 MAP3K2Q9Y2U5 619 aa23.8■■□□□ 1.4
NDUFB4-204ENST00000491335 PI4KAP2A4QPH2 592 aa23.79■■□□□ 1.4
NDUFB4-204ENST00000491335 LMNB1P20700 586 aa23.79■■□□□ 1.4
NDUFB4-204ENST00000491335 SOGA3Q5TF21 947 aa23.79■■□□□ 1.4
NDUFB4-204ENST00000491335 PI4KAP1Q8N8J0 262 aa23.79■■□□□ 1.4
NDUFB4-204ENST00000491335 RBM17Q96I25 401 aaKnown RBP23.79■■□□□ 1.4
NDUFB4-204ENST00000491335 RTL5Q5HYW3 569 aaPredicted RBP23.78■■□□□ 1.4
NDUFB4-204ENST00000491335 OLFM4Q6UX06 510 aa23.78■■□□□ 1.4
NDUFB4-204ENST00000491335 CRAMP1Q96RY5 1269 aa23.78■■□□□ 1.4
NDUFB4-204ENST00000491335 LAMB2P55268 1798 aa23.78■■□□□ 1.4
NDUFB4-204ENST00000491335 GPBP1L1Q9HC44 474 aaPredicted RBP23.77■■□□□ 1.4
NDUFB4-204ENST00000491335 E9PSI1 815 aa23.76■■□□□ 1.39
NDUFB4-204ENST00000491335 FLIIQ13045 1269 aa23.76■■□□□ 1.39
NDUFB4-204ENST00000491335 CCDC93Q567U6 631 aa23.76■■□□□ 1.39
NDUFB4-204ENST00000491335 CCDC191Q8NCU4 936 aa23.76■■□□□ 1.39
NDUFB4-204ENST00000491335 LTBP3Q9NS15 1303 aa23.76■■□□□ 1.39
NDUFB4-204ENST00000491335 SLFN5Q08AF3 891 aa23.75■■□□□ 1.39
NDUFB4-204ENST00000491335 CDCA7LQ96GN5 454 aa23.75■■□□□ 1.39
NDUFB4-204ENST00000491335 TAOK3Q9H2K8 898 aa23.75■■□□□ 1.39
NDUFB4-204ENST00000491335 DDX60Q8IY21 1712 aaKnown RBP23.74■■□□□ 1.39
NDUFB4-204ENST00000491335 ZBTB38Q8NAP3 1195 aaPredicted RBP23.74■■□□□ 1.39
NDUFB4-204ENST00000491335 CWC25Q9NXE8 425 aaPredicted RBP23.74■■□□□ 1.39
NDUFB4-204ENST00000491335 IRS4O14654 1257 aaPredicted RBP23.73■■□□□ 1.39
NDUFB4-204ENST00000491335 IGKV5-2P06315 115 aa23.73■■□□□ 1.39
NDUFB4-204ENST00000491335 FKBP5Q13451 457 aaPredicted RBP23.73■■□□□ 1.39
NDUFB4-204ENST00000491335 JARID2Q92833 1246 aaPredicted RBP23.73■■□□□ 1.39
NDUFB4-204ENST00000491335 NEXNQ0ZGT2 675 aa23.72■■□□□ 1.39
NDUFB4-204ENST00000491335 RTKN2Q8IZC4 609 aa23.72■■□□□ 1.39
NDUFB4-204ENST00000491335 DICER1Q9UPY3 1922 aaKnown RBP23.72■■□□□ 1.39
NDUFB4-204ENST00000491335 TAF1P21675 1872 aa23.71■■□□□ 1.39
NDUFB4-204ENST00000491335 ABCC4O15439 1325 aa23.71■■□□□ 1.39
NDUFB4-204ENST00000491335 PPEF1O14829 653 aaPredicted RBP23.71■■□□□ 1.39
NDUFB4-204ENST00000491335 PCCAP05165 728 aaPredicted RBP23.71■■□□□ 1.39
NDUFB4-204ENST00000491335 DDX46Q7L014 1031 aaKnown RBP23.71■■□□□ 1.39
NDUFB4-204ENST00000491335 SLC51AQ86UW1 340 aa23.71■■□□□ 1.39
NDUFB4-204ENST00000491335 FKBP4Q02790 459 aaKnown RBP eCLIP23.7■■□□□ 1.38
NDUFB4-204ENST00000491335 SF3B3Q15393 1217 aaKnown RBP23.7■■□□□ 1.38
NDUFB4-204ENST00000491335 CWF19L2Q2TBE0 894 aaKnown RBP23.7■■□□□ 1.38
NDUFB4-204ENST00000491335 CC2D2BQ6DHV5 1058 aa23.7■■□□□ 1.38
NDUFB4-204ENST00000491335 BBOX1O75936 387 aa23.69■■□□□ 1.38
NDUFB4-204ENST00000491335 DNAAF4Q8WXU2 420 aa23.69■■□□□ 1.38
NDUFB4-204ENST00000491335 ZC3H4Q9UPT8 1303 aaKnown RBP23.68■■□□□ 1.38
NDUFB4-204ENST00000491335 NEURL1BA8MQ27 555 aa23.68■■□□□ 1.38
NDUFB4-204ENST00000491335 TRMT2AQ8IZ69 625 aaKnown RBP23.68■■□□□ 1.38
NDUFB4-204ENST00000491335 ZNF277Q9NRM2 450 aaPredicted RBP23.68■■□□□ 1.38
NDUFB4-204ENST00000491335 SNED1Q8TER0 1413 aa23.67■■□□□ 1.38
NDUFB4-204ENST00000491335 GRAPQ13588 217 aa23.67■■□□□ 1.38
NDUFB4-204ENST00000491335 GRAPLQ8TC17 118 aaPredicted RBP23.67■■□□□ 1.38
NDUFB4-204ENST00000491335 NMRK2Q9NPI5 230 aa23.67■■□□□ 1.38
NDUFB4-204ENST00000491335 ATP6V0A2Q9Y487 856 aa23.67■■□□□ 1.38
NDUFB4-204ENST00000491335 TIAM2Q8IVF5 1701 aa23.67■■□□□ 1.38
NDUFB4-204ENST00000491335 F6X3S4 739 aa23.66■■□□□ 1.38
NDUFB4-204ENST00000491335 HSP90B1P14625 803 aaKnown RBP23.66■■□□□ 1.38
NDUFB4-204ENST00000491335 KDM2BQ8NHM5 1336 aa23.65■■□□□ 1.38
NDUFB4-204ENST00000491335 KIF3CO14782 793 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms