RNA–Protein interactions for RNA: ENST00000491295.1

GGA1-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 4

Gene GGA1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-223ENST00000491295 ABCC12Q96J65 1359 aa23.48■■□□□ 1.35
GGA1-223ENST00000491295 NTSR2O95665 410 aa23.47■■□□□ 1.35
GGA1-223ENST00000491295 RNF123Q5XPI4 1314 aa23.47■■□□□ 1.35
GGA1-223ENST00000491295 SCN4AP35499 1836 aa23.47■■□□□ 1.35
GGA1-223ENST00000491295 FZD9O00144 591 aa23.46■■□□□ 1.35
GGA1-223ENST00000491295 CHL1O00533 1208 aa23.46■■□□□ 1.35
GGA1-223ENST00000491295 WDR43Q15061 677 aaKnown RBP eCLIP23.46■■□□□ 1.35
GGA1-223ENST00000491295 HSP90AB3PQ58FF7 597 aa23.46■■□□□ 1.35
GGA1-223ENST00000491295 SLC10A5Q5PT55 438 aa23.46■■□□□ 1.35
GGA1-223ENST00000491295 LDHDQ86WU2 507 aa23.46■■□□□ 1.35
GGA1-223ENST00000491295 JDP2Q8WYK2 163 aa23.46■■□□□ 1.35
GGA1-223ENST00000491295 NLRP3Q96P20 1036 aa23.46■■□□□ 1.35
GGA1-223ENST00000491295 OLFM4Q6UX06 510 aa23.45■■□□□ 1.34
GGA1-223ENST00000491295 TAF1DQ9H5J8 278 aaPredicted RBP23.45■■□□□ 1.34
GGA1-223ENST00000491295 UTP14AQ9BVJ6 771 aaKnown RBP23.44■■□□□ 1.34
GGA1-223ENST00000491295 TMX4Q9H1E5 349 aaPredicted RBP23.44■■□□□ 1.34
GGA1-223ENST00000491295 SNED1Q8TER0 1413 aa23.43■■□□□ 1.34
GGA1-223ENST00000491295 GPC2Q8N158 579 aa23.43■■□□□ 1.34
GGA1-223ENST00000491295 DDX21Q9NR30 783 aaKnown RBP eCLIP23.43■■□□□ 1.34
GGA1-223ENST00000491295 CREBZFQ9NS37 354 aa23.43■■□□□ 1.34
GGA1-223ENST00000491295 HACL1Q9UJ83 578 aa23.43■■□□□ 1.34
GGA1-223ENST00000491295 NEUROD2Q15784 382 aa23.42■■□□□ 1.34
GGA1-223ENST00000491295 COPS6Q7L5N1 327 aa23.42■■□□□ 1.34
GGA1-223ENST00000491295 PNMA8AQ86V59 439 aaPredicted RBP23.42■■□□□ 1.34
GGA1-223ENST00000491295 HOXB7P09629 217 aa23.41■■□□□ 1.34
GGA1-223ENST00000491295 CCDC146Q8IYE0 955 aa23.41■■□□□ 1.34
GGA1-223ENST00000491295 VPS33BQ9H267 617 aa23.41■■□□□ 1.34
GGA1-223ENST00000491295 TRIM35Q9UPQ4 493 aa23.41■■□□□ 1.34
GGA1-223ENST00000491295 ZNF541Q9H0D2 1346 aa23.4■■□□□ 1.34
GGA1-223ENST00000491295 PPEF1O14829 653 aaPredicted RBP23.4■■□□□ 1.34
GGA1-223ENST00000491295 PROSER3Q2NL68 480 aa23.4■■□□□ 1.34
GGA1-223ENST00000491295 ADAMTS8Q9UP79 889 aa23.4■■□□□ 1.34
GGA1-223ENST00000491295 POTEIP0CG38 1075 aa23.39■■□□□ 1.33
GGA1-223ENST00000491295 POTEJP0CG39 1038 aa23.39■■□□□ 1.33
GGA1-223ENST00000491295 EIF6P56537 245 aaKnown RBP23.39■■□□□ 1.33
GGA1-223ENST00000491295 TCIRG1Q13488 830 aa23.39■■□□□ 1.33
GGA1-223ENST00000491295 ANXA1P04083 346 aa23.38■■□□□ 1.33
GGA1-223ENST00000491295 EPHX2P34913 555 aa23.38■■□□□ 1.33
GGA1-223ENST00000491295 NLRP10Q86W26 655 aa23.38■■□□□ 1.33
GGA1-223ENST00000491295 XAGE3Q8WTP9 111 aa23.38■■□□□ 1.33
GGA1-223ENST00000491295 ATP6V0A2Q9Y487 856 aa23.38■■□□□ 1.33
GGA1-223ENST00000491295 PASKQ96RG2 1323 aa23.37■■□□□ 1.33
GGA1-223ENST00000491295 PCNTO95613 3336 aa23.37■■□□□ 1.33
GGA1-223ENST00000491295 BBOX1O75936 387 aa23.37■■□□□ 1.33
GGA1-223ENST00000491295 AIMP1Q12904 312 aaKnown RBP23.37■■□□□ 1.33
GGA1-223ENST00000491295 CFAP44Q96MT7 982 aa23.37■■□□□ 1.33
GGA1-223ENST00000491295 LAS1LQ9Y4W2 734 aaKnown RBP23.37■■□□□ 1.33
GGA1-223ENST00000491295 LARGE2Q8N3Y3 721 aa23.36■■□□□ 1.33
GGA1-223ENST00000491295 NECTIN2Q92692 538 aa23.36■■□□□ 1.33
GGA1-223ENST00000491295 PRKRIP1Q9H875 184 aaPredicted RBP23.36■■□□□ 1.33
GGA1-223ENST00000491295 EAPPQ56P03 285 aaPredicted RBP23.35■■□□□ 1.33
GGA1-223ENST00000491295 C3orf67Q6ZVT6 689 aa23.35■■□□□ 1.33
GGA1-223ENST00000491295 SUPT20HQ8NEM7 779 aa23.35■■□□□ 1.33
GGA1-223ENST00000491295 DBF4Q9UBU7 674 aaPredicted RBP23.35■■□□□ 1.33
GGA1-223ENST00000491295 CLEC11AQ9Y240 323 aa23.35■■□□□ 1.33
GGA1-223ENST00000491295 ITGBL1O95965 494 aaPredicted RBP23.34■■□□□ 1.33
GGA1-223ENST00000491295 HDGFL1Q5TGJ6 251 aa23.34■■□□□ 1.33
GGA1-223ENST00000491295 PLBD2Q8NHP8 589 aa23.34■■□□□ 1.33
GGA1-223ENST00000491295 TRMT112Q9UI30 125 aaKnown RBP23.34■■□□□ 1.33
GGA1-223ENST00000491295 SH3TC1Q8TE82 1336 aa23.33■■□□□ 1.33
GGA1-223ENST00000491295 ANKRD36CQ5JPF3 1778 aa23.33■■□□□ 1.33
GGA1-223ENST00000491295 LMOD1P29536 600 aaPredicted RBP23.33■■□□□ 1.33
GGA1-223ENST00000491295 ANKRD13DQ6ZTN6 518 aa23.33■■□□□ 1.33
GGA1-223ENST00000491295 SP8Q8IXZ3 490 aa23.33■■□□□ 1.33
GGA1-223ENST00000491295 HYPKQ9NX55 129 aa23.33■■□□□ 1.33
GGA1-223ENST00000491295 CHPF2Q9P2E5 772 aa23.33■■□□□ 1.33
GGA1-223ENST00000491295 TMEM88BA6NKF7 163 aa23.32■■□□□ 1.32
GGA1-223ENST00000491295 CALD1Q05682 793 aaKnown RBP23.32■■□□□ 1.32
GGA1-223ENST00000491295 KRT24Q2M2I5 525 aa23.32■■□□□ 1.32
GGA1-223ENST00000491295 DDX46Q7L014 1031 aaKnown RBP23.32■■□□□ 1.32
GGA1-223ENST00000491295 TMC4Q7Z404 712 aa23.32■■□□□ 1.32
GGA1-223ENST00000491295 NIM1KQ8IY84 436 aa23.32■■□□□ 1.32
GGA1-223ENST00000491295 RTFDC1Q9BY42 306 aaPredicted RBP23.32■■□□□ 1.32
GGA1-223ENST00000491295 ABCC4O15439 1325 aa23.32■■□□□ 1.32
GGA1-223ENST00000491295 TCERG1O14776 1098 aaKnown RBP23.31■■□□□ 1.32
GGA1-223ENST00000491295 CNTROBQ8N137 903 aa23.31■■□□□ 1.32
GGA1-223ENST00000491295 GJA3Q9Y6H8 435 aa23.31■■□□□ 1.32
GGA1-223ENST00000491295 PPIP5K2O43314 1243 aa23.3■■□□□ 1.32
GGA1-223ENST00000491295 HSPA1AP0DMV8 641 aaKnown RBP23.3■■□□□ 1.32
GGA1-223ENST00000491295 HSPA1BP0DMV9 641 aaKnown RBP23.3■■□□□ 1.32
GGA1-223ENST00000491295 HCLS1P14317 486 aaPredicted RBP23.3■■□□□ 1.32
GGA1-223ENST00000491295 ADAMTSL1Q8N6G6 1762 aa23.29■■□□□ 1.32
GGA1-223ENST00000491295 COL13A1Q5TAT6 717 aaPredicted RBP23.29■■□□□ 1.32
GGA1-223ENST00000491295 DUSP27Q5VZP5 1158 aa23.29■■□□□ 1.32
GGA1-223ENST00000491295 CHMP4AQ9BY43 222 aa23.29■■□□□ 1.32
GGA1-223ENST00000491295 MKRN1Q9UHC7 482 aaKnown RBP23.29■■□□□ 1.32
GGA1-223ENST00000491295 CNTNAP1P78357 1384 aa23.28■■□□□ 1.32
GGA1-223ENST00000491295 ZNF853P0CG23 659 aa23.28■■□□□ 1.32
GGA1-223ENST00000491295 TRIM28Q13263 835 aaKnown RBP23.28■■□□□ 1.32
GGA1-223ENST00000491295 GRAPQ13588 217 aa23.28■■□□□ 1.32
GGA1-223ENST00000491295 DPP8Q6V1X1 898 aaPredicted RBP23.28■■□□□ 1.32
GGA1-223ENST00000491295 MPNDQ8N594 471 aa23.28■■□□□ 1.32
GGA1-223ENST00000491295 GRAPLQ8TC17 118 aaPredicted RBP23.28■■□□□ 1.32
GGA1-223ENST00000491295 ISCA1Q9BUE6 129 aa23.28■■□□□ 1.32
GGA1-223ENST00000491295 ZNRF3Q9ULT6 936 aa23.28■■□□□ 1.32
GGA1-223ENST00000491295 COL4A5P29400 1685 aa23.28■■□□□ 1.32
GGA1-223ENST00000491295 USP50Q70EL3 339 aaPredicted RBP23.27■■□□□ 1.32
GGA1-223ENST00000491295 MBIPQ9NS73 344 aa23.27■■□□□ 1.32
GGA1-223ENST00000491295 IFT57Q9NWB7 429 aa23.27■■□□□ 1.32
GGA1-223ENST00000491295 SCNN1DP51172 638 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms