RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 SASH1O94885 1247 aa17.19■□□□□ 0.34
SMPD4-219ENST00000491128 BICDL1Q6ZP65 573 aa17.19■□□□□ 0.34
SMPD4-219ENST00000491128 PHF14O94880 888 aa17.18■□□□□ 0.34
SMPD4-219ENST00000491128 BMP2KLQ5H9B9 411 aa17.18■□□□□ 0.34
SMPD4-219ENST00000491128 TTC22Q5TAA0 569 aa17.18■□□□□ 0.34
SMPD4-219ENST00000491128 LRRC4BQ9NT99 713 aa17.18■□□□□ 0.34
SMPD4-219ENST00000491128 TRMT112Q9UI30 125 aaKnown RBP17.18■□□□□ 0.34
SMPD4-219ENST00000491128 GOLGB1Q14789 3259 aaKnown RBP17.18■□□□□ 0.34
SMPD4-219ENST00000491128 GNPATO15228 680 aa17.17■□□□□ 0.34
SMPD4-219ENST00000491128 MX1P20591 662 aa17.17■□□□□ 0.34
SMPD4-219ENST00000491128 PTPN12Q05209 780 aaKnown RBP17.17■□□□□ 0.34
SMPD4-219ENST00000491128 G3BP1Q13283 466 aaKnown RBP eCLIP17.17■□□□□ 0.344e-7■□□□□ 10.4
SMPD4-219ENST00000491128 KIF1BPQ96EK5 621 aa17.17■□□□□ 0.34
SMPD4-219ENST00000491128 CAMTA2O94983 1202 aa17.17■□□□□ 0.34
SMPD4-219ENST00000491128 SDSP20132 328 aa17.17■□□□□ 0.34
SMPD4-219ENST00000491128 RFX5P48382 616 aaPredicted RBP17.17■□□□□ 0.34
SMPD4-219ENST00000491128 CCDC8Q9H0W5 538 aaPredicted RBP17.17■□□□□ 0.34
SMPD4-219ENST00000491128 SRP68Q9UHB9 627 aaKnown RBP17.17■□□□□ 0.34
SMPD4-219ENST00000491128 HDAC5Q9UQL6 1122 aa17.17■□□□□ 0.34
SMPD4-219ENST00000491128 NOP58Q9Y2X3 529 aaKnown RBP17.17■□□□□ 0.34
SMPD4-219ENST00000491128 MYH14Q7Z406 1995 aaKnown RBP17.17■□□□□ 0.34
SMPD4-219ENST00000491128 AFDNP55196 1824 aaKnown RBP17.16■□□□□ 0.34
SMPD4-219ENST00000491128 RAB11FIP3O75154 756 aa17.16■□□□□ 0.34
SMPD4-219ENST00000491128 RABL6Q3YEC7 729 aaPredicted RBP17.16■□□□□ 0.34
SMPD4-219ENST00000491128 SUSD4Q5VX71 490 aa17.16■□□□□ 0.34
SMPD4-219ENST00000491128 TLR7Q9NYK1 1049 aaKnown RBP17.16■□□□□ 0.34
SMPD4-219ENST00000491128 COL15A1P39059 1388 aa17.15■□□□□ 0.34
SMPD4-219ENST00000491128 HCLS1P14317 486 aaPredicted RBP17.15■□□□□ 0.34
SMPD4-219ENST00000491128 TBC1D9Q6ZT07 1266 aa17.15■□□□□ 0.34
SMPD4-219ENST00000491128 NUP188Q5SRE5 1749 aa17.15■□□□□ 0.34
SMPD4-219ENST00000491128 SALL3Q9BXA9 1300 aa17.15■□□□□ 0.34
SMPD4-219ENST00000491128 ANP32AP39687 249 aaKnown RBP17.15■□□□□ 0.34
SMPD4-219ENST00000491128 RBM6P78332 1123 aaKnown RBP17.15■□□□□ 0.34
SMPD4-219ENST00000491128 ZNF772Q68DY9 489 aaPredicted RBP17.15■□□□□ 0.34
SMPD4-219ENST00000491128 ZBTB38Q8NAP3 1195 aaPredicted RBP17.15■□□□□ 0.34
SMPD4-219ENST00000491128 PUS3Q9BZE2 481 aaKnown RBP17.15■□□□□ 0.34
SMPD4-219ENST00000491128 RGS17Q9UGC6 210 aaPredicted RBP17.15■□□□□ 0.34
SMPD4-219ENST00000491128 NIP7Q9Y221 180 aaKnown RBP eCLIP17.15■□□□□ 0.34
SMPD4-219ENST00000491128 LRRC24Q50LG9 513 aa17.14■□□□□ 0.33
SMPD4-219ENST00000491128 AACSQ86V21 672 aa17.14■□□□□ 0.33
SMPD4-219ENST00000491128 CCDC24Q8N4L8 307 aa17.14■□□□□ 0.33
SMPD4-219ENST00000491128 RILPL2Q969X0 211 aa17.14■□□□□ 0.33
SMPD4-219ENST00000491128 EAF2Q96CJ1 260 aaPredicted RBP17.14■□□□□ 0.33
SMPD4-219ENST00000491128 BCL11BQ9C0K0 894 aaPredicted RBP17.14■□□□□ 0.33
SMPD4-219ENST00000491128 TRIM6-TRIM34B2RNG4 842 aa17.14■□□□□ 0.33
SMPD4-219ENST00000491128 MSH5O43196 834 aa17.14■□□□□ 0.33
SMPD4-219ENST00000491128 TFCP2Q12800 502 aa17.14■□□□□ 0.33
SMPD4-219ENST00000491128 ERVV-1B6SEH8 477 aa17.13■□□□□ 0.33
SMPD4-219ENST00000491128 ZNF34Q8IZ26 560 aa17.13■□□□□ 0.33
SMPD4-219ENST00000491128 IRS4O14654 1257 aaPredicted RBP17.13■□□□□ 0.33
SMPD4-219ENST00000491128 PCCAP05165 728 aaPredicted RBP17.13■□□□□ 0.33
SMPD4-219ENST00000491128 TRIM28Q13263 835 aaKnown RBP17.13■□□□□ 0.33
SMPD4-219ENST00000491128 USPL1Q5W0Q7 1092 aa17.13■□□□□ 0.33
SMPD4-219ENST00000491128 POTEAQ6S8J7 498 aa17.13■□□□□ 0.33
SMPD4-219ENST00000491128 FAM196AQ6ZSG2 479 aa17.13■□□□□ 0.33
SMPD4-219ENST00000491128 CLASRPQ8N2M8 674 aaKnown RBP17.13■□□□□ 0.33
SMPD4-219ENST00000491128 BTAF1O14981 1849 aa17.12■□□□□ 0.33
SMPD4-219ENST00000491128 SLC4A3P48751 1232 aa17.12■□□□□ 0.33
SMPD4-219ENST00000491128 RXRBP28702 533 aa17.12■□□□□ 0.33
SMPD4-219ENST00000491128 HSP90AB4PQ58FF6 505 aa17.12■□□□□ 0.33
SMPD4-219ENST00000491128 HSP90AB3PQ58FF7 597 aa17.11■□□□□ 0.33
SMPD4-219ENST00000491128 GREM2Q9H772 168 aa17.11■□□□□ 0.33
SMPD4-219ENST00000491128 IFIT2P09913 472 aaKnown RBP17.11■□□□□ 0.33
SMPD4-219ENST00000491128 COPRSQ9NQ92 184 aa17.11■□□□□ 0.33
SMPD4-219ENST00000491128 NDUFB9Q9Y6M9 179 aa17.11■□□□□ 0.33
SMPD4-219ENST00000491128 ARHGEF1Q92888 912 aaKnown RBP17.1■□□□□ 0.33
SMPD4-219ENST00000491128 CCDC57Q2TAC2 916 aa17.09■□□□□ 0.33
SMPD4-219ENST00000491128 TBC1D9BQ66K14 1250 aa17.09■□□□□ 0.33
SMPD4-219ENST00000491128 PI4K2BQ8TCG2 481 aa17.09■□□□□ 0.33
SMPD4-219ENST00000491128 OSBPL3Q9H4L5 887 aa17.09■□□□□ 0.33
SMPD4-219ENST00000491128 BCL2L12Q9HB09 334 aa17.09■□□□□ 0.33
SMPD4-219ENST00000491128 RTCBQ9Y3I0 505 aaKnown RBP17.09■□□□□ 0.33
SMPD4-219ENST00000491128 PROM2Q8N271 834 aa17.09■□□□□ 0.33
SMPD4-219ENST00000491128 TTLL11Q8NHH1 800 aa17.09■□□□□ 0.33
SMPD4-219ENST00000491128 CDC45O75419 566 aa17.08■□□□□ 0.33
SMPD4-219ENST00000491128 RPS6KA4O75676 772 aa17.08■□□□□ 0.33
SMPD4-219ENST00000491128 TIMM10P62072 90 aa17.08■□□□□ 0.33
SMPD4-219ENST00000491128 ATG9AQ7Z3C6 839 aa17.08■□□□□ 0.33
SMPD4-219ENST00000491128 CNTNAP4Q9C0A0 1308 aa17.08■□□□□ 0.32
SMPD4-219ENST00000491128 ERC1Q8IUD2 1116 aa17.08■□□□□ 0.32
SMPD4-219ENST00000491128 AK7Q96M32 723 aa17.08■□□□□ 0.32
SMPD4-219ENST00000491128 BRWD3Q6RI45 1802 aa17.07■□□□□ 0.32
SMPD4-219ENST00000491128 ITGA6P23229 1130 aa17.07■□□□□ 0.32
SMPD4-219ENST00000491128 TAF7LQ5H9L4 462 aa17.07■□□□□ 0.32
SMPD4-219ENST00000491128 UTP14AQ9BVJ6 771 aaKnown RBP17.07■□□□□ 0.32
SMPD4-219ENST00000491128 STAP2Q9UGK3 403 aa17.07■□□□□ 0.32
SMPD4-219ENST00000491128 NHSQ6T4R5 1651 aa17.07■□□□□ 0.32
SMPD4-219ENST00000491128 CTSWP56202 376 aa17.07■□□□□ 0.32
SMPD4-219ENST00000491128 NEUROD6Q96NK8 337 aa17.07■□□□□ 0.32
SMPD4-219ENST00000491128 ZPR1O75312 459 aa17.06■□□□□ 0.32
SMPD4-219ENST00000491128 IFIT5Q13325 482 aaKnown RBP17.06■□□□□ 0.32
SMPD4-219ENST00000491128 EDC3Q96F86 508 aaKnown RBP17.06■□□□□ 0.32
SMPD4-219ENST00000491128 BOLA2Q9H3K6 86 aa17.06■□□□□ 0.32
SMPD4-219ENST00000491128 UPF2Q9HAU5 1272 aaKnown RBP17.06■□□□□ 0.32
SMPD4-219ENST00000491128 SEC31BQ9NQW1 1179 aa17.06■□□□□ 0.32
SMPD4-219ENST00000491128 APBA3O96018 575 aa17.06■□□□□ 0.32
SMPD4-219ENST00000491128 TNNI3KQ59H18 835 aa17.06■□□□□ 0.32
SMPD4-219ENST00000491128 C3orf67Q6ZVT6 689 aa17.06■□□□□ 0.32
SMPD4-219ENST00000491128 DBNDD2Q9BQY9 259 aa17.06■□□□□ 0.32
SMPD4-219ENST00000491128 FPGT-TNNI3KV9GXZ4 949 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms