RNA–Protein interactions for RNA: ENST00000490564.1

NINJ1-205, Transcript of ninjurin 1, humanhuman

TSL 1 (best)

Gene NINJ1, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NINJ1-205ENST00000490564 WDR63Q8IWG1 891 aa13.52□□□□□ -0.25
NINJ1-205ENST00000490564 TSR2Q969E8 191 aaKnown RBP13.52□□□□□ -0.25
NINJ1-205ENST00000490564 CHMP4AQ9BY43 222 aa13.52□□□□□ -0.25
NINJ1-205ENST00000490564 RNF181Q9P0P0 153 aa13.52□□□□□ -0.25
NINJ1-205ENST00000490564 RNF123Q5XPI4 1314 aa13.52□□□□□ -0.25
NINJ1-205ENST00000490564 CACNA1FO60840 1977 aa13.52□□□□□ -0.25
NINJ1-205ENST00000490564 LTBP3Q9NS15 1303 aa13.51□□□□□ -0.25
NINJ1-205ENST00000490564 ZC3H4Q9UPT8 1303 aaKnown RBP13.51□□□□□ -0.25
NINJ1-205ENST00000490564 SOGA3Q5TF21 947 aa13.51□□□□□ -0.25
NINJ1-205ENST00000490564 ANKRD13DQ6ZTN6 518 aa13.51□□□□□ -0.25
NINJ1-205ENST00000490564 NLRP10Q86W26 655 aa13.51□□□□□ -0.25
NINJ1-205ENST00000490564 TSPYL6Q8N831 410 aa13.51□□□□□ -0.25
NINJ1-205ENST00000490564 ZNF526Q8TF50 670 aaPredicted RBP13.51□□□□□ -0.25
NINJ1-205ENST00000490564 UTP14AQ9BVJ6 771 aaKnown RBP13.51□□□□□ -0.25
NINJ1-205ENST00000490564 COL4A1P02462 1669 aa13.5□□□□□ -0.25
NINJ1-205ENST00000490564 LMNB1P20700 586 aa13.5□□□□□ -0.25
NINJ1-205ENST00000490564 ALDH1B1P30837 517 aa13.5□□□□□ -0.25
NINJ1-205ENST00000490564 SLC10A5Q5PT55 438 aa13.5□□□□□ -0.25
NINJ1-205ENST00000490564 CCDC30Q5VVM6 783 aa13.5□□□□□ -0.25
NINJ1-205ENST00000490564 C7orf43Q8WVR3 580 aa13.5□□□□□ -0.25
NINJ1-205ENST00000490564 ZNF219Q9P2Y4 722 aaPredicted RBP13.5□□□□□ -0.25
NINJ1-205ENST00000490564 TAF1P21675 1872 aa13.49□□□□□ -0.25
NINJ1-205ENST00000490564 FANCIQ9NVI1 1328 aa13.49□□□□□ -0.25
NINJ1-205ENST00000490564 HOXA10P31260 410 aaPredicted RBP13.49□□□□□ -0.25
NINJ1-205ENST00000490564 C1QTNF8P60827 252 aa13.49□□□□□ -0.25
NINJ1-205ENST00000490564 TWISTNBQ3B726 338 aaPredicted RBP13.49□□□□□ -0.25
NINJ1-205ENST00000490564 ISCA1Q9BUE6 129 aa13.49□□□□□ -0.25
NINJ1-205ENST00000490564 PHAXQ9H814 394 aaKnown RBP13.49□□□□□ -0.25
NINJ1-205ENST00000490564 SPINK5Q9NQ38 1064 aaPredicted RBP13.49□□□□□ -0.25
NINJ1-205ENST00000490564 SALL2Q9Y467 1007 aaPredicted RBP13.49□□□□□ -0.25
NINJ1-205ENST00000490564 SNED1Q8TER0 1413 aa13.48□□□□□ -0.25
NINJ1-205ENST00000490564 CCDC93Q567U6 631 aa13.48□□□□□ -0.25
NINJ1-205ENST00000490564 C3orf67Q6ZVT6 689 aa13.48□□□□□ -0.25
NINJ1-205ENST00000490564 RPGRQ92834 1020 aaKnown RBP13.48□□□□□ -0.25
NINJ1-205ENST00000490564 NLRP3Q96P20 1036 aa13.48□□□□□ -0.25
NINJ1-205ENST00000490564 TAOK3Q9H2K8 898 aa13.48□□□□□ -0.25
NINJ1-205ENST00000490564 SH3TC1Q8TE82 1336 aa13.47□□□□□ -0.25
NINJ1-205ENST00000490564 KIF3CO14782 793 aa13.47□□□□□ -0.25
NINJ1-205ENST00000490564 GOLGA2Q08379 1002 aa13.47□□□□□ -0.25
NINJ1-205ENST00000490564 RIC3Q7Z5B4 369 aa13.47□□□□□ -0.25
NINJ1-205ENST00000490564 ZNF428Q96B54 188 aa13.47□□□□□ -0.25
NINJ1-205ENST00000490564 RBM17Q96I25 401 aaKnown RBP13.47□□□□□ -0.25
NINJ1-205ENST00000490564 CRAMP1Q96RY5 1269 aa13.47□□□□□ -0.25
NINJ1-205ENST00000490564 TRMT112Q9UI30 125 aaKnown RBP13.47□□□□□ -0.25
NINJ1-205ENST00000490564 TRIM28Q13263 835 aaKnown RBP13.46□□□□□ -0.25
NINJ1-205ENST00000490564 WDR90Q96KV7 1748 aa13.46□□□□□ -0.25
NINJ1-205ENST00000490564 KDM2BQ8NHM5 1336 aa13.45□□□□□ -0.26
NINJ1-205ENST00000490564 ZNF521Q96K83 1311 aa13.45□□□□□ -0.26
NINJ1-205ENST00000490564 LRRC37AA6NMS7 1700 aa13.45□□□□□ -0.26
NINJ1-205ENST00000490564 ATP5J2-PTCD1G3V325 749 aa13.45□□□□□ -0.26
NINJ1-205ENST00000490564 CCER2I3L3R5 266 aa13.45□□□□□ -0.26
NINJ1-205ENST00000490564 DDX58O95786 925 aaKnown RBP13.45□□□□□ -0.26
NINJ1-205ENST00000490564 FKBP4Q02790 459 aaKnown RBP eCLIP13.45□□□□□ -0.264e-6■■■■■ 31.1
NINJ1-205ENST00000490564 RTKN2Q8IZC4 609 aa13.45□□□□□ -0.26
NINJ1-205ENST00000490564 SYNE4Q8N205 404 aa13.45□□□□□ -0.26
NINJ1-205ENST00000490564 STK31Q9BXU1 1019 aa13.45□□□□□ -0.26
NINJ1-205ENST00000490564 VAMP4O75379 141 aa13.44□□□□□ -0.26
NINJ1-205ENST00000490564 HCLS1P14317 486 aaPredicted RBP13.44□□□□□ -0.26
NINJ1-205ENST00000490564 EXOSC9Q06265 439 aaKnown RBP13.44□□□□□ -0.26
NINJ1-205ENST00000490564 CC2D2BQ6DHV5 1058 aa13.44□□□□□ -0.26
NINJ1-205ENST00000490564 OLFM4Q6UX06 510 aa13.44□□□□□ -0.26
NINJ1-205ENST00000490564 NMRK2Q9NPI5 230 aa13.44□□□□□ -0.26
NINJ1-205ENST00000490564 ABCC4O15439 1325 aa13.43□□□□□ -0.26
NINJ1-205ENST00000490564 MYH3P11055 1940 aa13.43□□□□□ -0.26
NINJ1-205ENST00000490564 GLTPD2A6NH11 291 aa13.43□□□□□ -0.26
NINJ1-205ENST00000490564 PPEF1O14829 653 aaPredicted RBP13.43□□□□□ -0.26
NINJ1-205ENST00000490564 GRIPAP1Q4V328 841 aa13.43□□□□□ -0.26
NINJ1-205ENST00000490564 MYD88Q99836 296 aa13.43□□□□□ -0.26
NINJ1-205ENST00000490564 METTL22Q9BUU2 404 aaPredicted RBP13.43□□□□□ -0.26
NINJ1-205ENST00000490564 MYH16Q9H6N6 1097 aa13.43□□□□□ -0.26
NINJ1-205ENST00000490564 TCERG1O14776 1098 aaKnown RBP13.42□□□□□ -0.26
NINJ1-205ENST00000490564 SLC4A2P04920 1241 aa13.42□□□□□ -0.26
NINJ1-205ENST00000490564 KSR2Q6VAB6 950 aa13.42□□□□□ -0.26
NINJ1-205ENST00000490564 ZBTB38Q8NAP3 1195 aaPredicted RBP13.42□□□□□ -0.26
NINJ1-205ENST00000490564 CCDC191Q8NCU4 936 aa13.42□□□□□ -0.26
NINJ1-205ENST00000490564 FAM89AQ96GI7 184 aa13.42□□□□□ -0.26
NINJ1-205ENST00000490564 PSMD1Q99460 953 aa13.42□□□□□ -0.26
NINJ1-205ENST00000490564 MAP3K2Q9Y2U5 619 aa13.42□□□□□ -0.26
NINJ1-205ENST00000490564 COL4A5P29400 1685 aa13.42□□□□□ -0.26
NINJ1-205ENST00000490564 SF3B3Q15393 1217 aaKnown RBP13.41□□□□□ -0.26
NINJ1-205ENST00000490564 DDX46Q7L014 1031 aaKnown RBP13.41□□□□□ -0.26
NINJ1-205ENST00000490564 G2E3Q7L622 706 aa13.41□□□□□ -0.26
NINJ1-205ENST00000490564 ATP6V0A2Q9Y487 856 aa13.41□□□□□ -0.26
NINJ1-205ENST00000490564 PI4KAP2A4QPH2 592 aa13.4□□□□□ -0.26
NINJ1-205ENST00000490564 IRS4O14654 1257 aaPredicted RBP13.4□□□□□ -0.26
NINJ1-205ENST00000490564 BBOX1O75936 387 aa13.4□□□□□ -0.26
NINJ1-205ENST00000490564 TOMM70O94826 608 aa13.4□□□□□ -0.26
NINJ1-205ENST00000490564 IARSP41252 1262 aaKnown RBP13.4□□□□□ -0.26
NINJ1-205ENST00000490564 GRAPQ13588 217 aa13.4□□□□□ -0.26
NINJ1-205ENST00000490564 PI4KAP1Q8N8J0 262 aa13.4□□□□□ -0.26
NINJ1-205ENST00000490564 GRAPLQ8TC17 118 aaPredicted RBP13.4□□□□□ -0.26
NINJ1-205ENST00000490564 RRAGCQ9HB90 399 aa13.4□□□□□ -0.26
NINJ1-205ENST00000490564 ZNF277Q9NRM2 450 aaPredicted RBP13.4□□□□□ -0.26
NINJ1-205ENST00000490564 CWC25Q9NXE8 425 aaPredicted RBP13.4□□□□□ -0.26
NINJ1-205ENST00000490564 SCN4AP35499 1836 aa13.4□□□□□ -0.26
NINJ1-205ENST00000490564 LTBP1Q14766 1721 aa13.39□□□□□ -0.27
NINJ1-205ENST00000490564 PCCAP05165 728 aaPredicted RBP13.39□□□□□ -0.27
NINJ1-205ENST00000490564 IGKV5-2P06315 115 aa13.39□□□□□ -0.27
NINJ1-205ENST00000490564 FLIIQ13045 1269 aa13.39□□□□□ -0.27
NINJ1-205ENST00000490564 RTL5Q5HYW3 569 aaPredicted RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms