RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 FAM157BP0CG42 384 aa6.9□□□□□ -1.3
CD46-216ENST00000490278 EPB42P16452 691 aa6.9□□□□□ -1.3
CD46-216ENST00000490278 PCSK2P16519 638 aa6.9□□□□□ -1.3
CD46-216ENST00000490278 GMPRP36959 345 aa6.9□□□□□ -1.3
CD46-216ENST00000490278 DNM1Q05193 864 aaKnown RBP6.9□□□□□ -1.3
CD46-216ENST00000490278 UBAP2LQ14157 1087 aaKnown RBP6.9□□□□□ -1.3
CD46-216ENST00000490278 SUZ12Q15022 739 aaKnown RBP6.9□□□□□ -1.3
CD46-216ENST00000490278 GPR152Q8TDT2 470 aa6.9□□□□□ -1.3
CD46-216ENST00000490278 SLC16A10Q8TF71 515 aa6.9□□□□□ -1.3
CD46-216ENST00000490278 PIK3R5Q8WYR1 880 aa6.9□□□□□ -1.3
CD46-216ENST00000490278 RBCK1Q9BYM8 510 aa6.9□□□□□ -1.3
CD46-216ENST00000490278 BRD7Q9NPI1 651 aa6.9□□□□□ -1.3
CD46-216ENST00000490278 PDGFAP04085 211 aa6.89□□□□□ -1.31
CD46-216ENST00000490278 USP5P45974 858 aa6.89□□□□□ -1.31
CD46-216ENST00000490278 ZSCAN29Q8IWY8 852 aaPredicted RBP6.89□□□□□ -1.31
CD46-216ENST00000490278 RGL4Q8IZJ4 473 aa6.89□□□□□ -1.31
CD46-216ENST00000490278 GTPBP3Q969Y2 492 aaKnown RBP6.89□□□□□ -1.31
CD46-216ENST00000490278 CITED4Q96RK1 184 aa6.89□□□□□ -1.31
CD46-216ENST00000490278 POLIQ9UNA4 740 aa6.89□□□□□ -1.31
CD46-216ENST00000490278 RTCBQ9Y3I0 505 aaKnown RBP6.89□□□□□ -1.31
CD46-216ENST00000490278 DCDC2BA2VCK2 349 aa6.88□□□□□ -1.31
CD46-216ENST00000490278 CDC14CA4D256 554 aa6.88□□□□□ -1.31
CD46-216ENST00000490278 KHNYNO15037 678 aaKnown RBP6.88□□□□□ -1.31
CD46-216ENST00000490278 RPLP1P05386 114 aaKnown RBP6.88□□□□□ -1.31
CD46-216ENST00000490278 FOXR1Q6PIV2 292 aa6.88□□□□□ -1.31
CD46-216ENST00000490278 DNAJC14Q6Y2X3 702 aaPredicted RBP6.88□□□□□ -1.31
CD46-216ENST00000490278 NUDT16Q96DE0 195 aaKnown RBP6.88□□□□□ -1.31
CD46-216ENST00000490278 NDFIP2Q9NV92 336 aa6.88□□□□□ -1.31
CD46-216ENST00000490278 NXF1Q9UBU9 619 aaKnown RBP6.88□□□□□ -1.31
CD46-216ENST00000490278 EFSO43281 561 aa6.87□□□□□ -1.31
CD46-216ENST00000490278 BNIP3LO60238 219 aa6.87□□□□□ -1.31
CD46-216ENST00000490278 MAPTP10636 758 aaKnown RBP6.87□□□□□ -1.31
CD46-216ENST00000490278 ERCC3P19447 782 aa6.87□□□□□ -1.31
CD46-216ENST00000490278 KCNQ4P56696 695 aa6.87□□□□□ -1.31
CD46-216ENST00000490278 TNP2Q05952 138 aa6.87□□□□□ -1.31
CD46-216ENST00000490278 PDE3BQ13370 1112 aa6.87□□□□□ -1.31
CD46-216ENST00000490278 LAMC2Q13753 1193 aa6.87□□□□□ -1.31
CD46-216ENST00000490278 SV2AQ7L0J3 742 aa6.87□□□□□ -1.31
CD46-216ENST00000490278 GJD3Q8N144 294 aa6.87□□□□□ -1.31
CD46-216ENST00000490278 CMTR1Q8N1G2 835 aaKnown RBP6.87□□□□□ -1.31
CD46-216ENST00000490278 VWA5B2Q8N398 1253 aa6.87□□□□□ -1.31
CD46-216ENST00000490278 TTC16Q8NEE8 873 aa6.87□□□□□ -1.31
CD46-216ENST00000490278 TMC1Q8TDI8 760 aa6.87□□□□□ -1.31
CD46-216ENST00000490278 NANOS1Q8WY41 292 aaKnown RBP6.87□□□□□ -1.31
CD46-216ENST00000490278 ASB16Q96NS5 453 aa6.87□□□□□ -1.31
CD46-216ENST00000490278 TRERF1Q96PN7 1200 aa6.87□□□□□ -1.31
CD46-216ENST00000490278 ATXN7L1Q9ULK2 861 aaPredicted RBP6.87□□□□□ -1.31
CD46-216ENST00000490278 PHF24Q9UPV7 400 aa6.87□□□□□ -1.31
CD46-216ENST00000490278 USP20Q9Y2K6 914 aa6.87□□□□□ -1.31
CD46-216ENST00000490278 GRNP28799 593 aaKnown RBP6.86□□□□□ -1.31
CD46-216ENST00000490278 EHHADHQ08426 723 aa6.86□□□□□ -1.31
CD46-216ENST00000490278 SFSWAPQ12872 951 aaKnown RBP6.86□□□□□ -1.31
CD46-216ENST00000490278 TMC7Q7Z402 723 aa6.86□□□□□ -1.31
CD46-216ENST00000490278 NPAS3Q8IXF0 933 aa6.86□□□□□ -1.31
CD46-216ENST00000490278 ABHD17AQ96GS6 310 aa6.86□□□□□ -1.31
CD46-216ENST00000490278 CFHR5Q9BXR6 569 aa6.86□□□□□ -1.31
CD46-216ENST00000490278 C11orf16Q9NQ32 467 aa6.86□□□□□ -1.31
CD46-216ENST00000490278 KCNH4Q9UQ05 1017 aa6.86□□□□□ -1.31
CD46-216ENST00000490278 FNDC3AQ9Y2H6 1198 aaKnown RBP6.86□□□□□ -1.31
CD46-216ENST00000490278 ANKRD33BA6NCL7 494 aa6.85□□□□□ -1.31
CD46-216ENST00000490278 VEGFBP49765 207 aa6.85□□□□□ -1.31
CD46-216ENST00000490278 C8orf34Q49A92 452 aa6.85□□□□□ -1.31
CD46-216ENST00000490278 RGS22Q8NE09 1264 aa6.85□□□□□ -1.31
CD46-216ENST00000490278 DMRTB1Q96MA1 342 aa6.85□□□□□ -1.31
CD46-216ENST00000490278 FAM129BQ96TA1 746 aa6.85□□□□□ -1.31
CD46-216ENST00000490278 MARK1Q9P0L2 795 aa6.85□□□□□ -1.31
CD46-216ENST00000490278 KCNMB2Q9Y691 235 aa6.85□□□□□ -1.31
CD46-216ENST00000490278 UBAP1LF5GYI3 381 aa6.84□□□□□ -1.31
CD46-216ENST00000490278 H3BM21 787 aa6.84□□□□□ -1.31
CD46-216ENST00000490278 GPR25O00155 361 aa6.84□□□□□ -1.31
CD46-216ENST00000490278 XYLBO75191 536 aa6.84□□□□□ -1.31
CD46-216ENST00000490278 TRIP4Q15650 581 aaPredicted RBP6.84□□□□□ -1.31
CD46-216ENST00000490278 IRF7Q92985 503 aa6.84□□□□□ -1.31
CD46-216ENST00000490278 GGNBP2Q9H3C7 697 aa6.84□□□□□ -1.31
CD46-216ENST00000490278 STRN4Q9NRL3 753 aa6.84□□□□□ -1.31
CD46-216ENST00000490278 EGFRP00533 1210 aa6.83□□□□□ -1.32
CD46-216ENST00000490278 CD33P20138 364 aa6.83□□□□□ -1.32
CD46-216ENST00000490278 FGFR3P22607 806 aa6.83□□□□□ -1.32
CD46-216ENST00000490278 HCN2Q9UL51 889 aa6.83□□□□□ -1.32
CD46-216ENST00000490278 A6NHS1 94 aa6.82□□□□□ -1.32
CD46-216ENST00000490278 GPR182O15218 404 aa6.82□□□□□ -1.32
CD46-216ENST00000490278 TREHO43280 583 aa6.82□□□□□ -1.32
CD46-216ENST00000490278 IGHA2P01877 340 aa6.82□□□□□ -1.32
CD46-216ENST00000490278 CCINQ13939 588 aa6.82□□□□□ -1.32
CD46-216ENST00000490278 FAM182BQ5T319 152 aa6.82□□□□□ -1.32
CD46-216ENST00000490278 PDE12Q6L8Q7 609 aaKnown RBP6.82□□□□□ -1.32
CD46-216ENST00000490278 XKR5Q6UX68 686 aa6.82□□□□□ -1.32
CD46-216ENST00000490278 NPAS4Q8IUM7 802 aa6.82□□□□□ -1.32
CD46-216ENST00000490278 GSX2Q9BZM3 304 aa6.82□□□□□ -1.32
CD46-216ENST00000490278 PLCB3Q01970 1234 aa6.81□□□□□ -1.32
CD46-216ENST00000490278 SPEM2Q0P670 501 aa6.81□□□□□ -1.32
CD46-216ENST00000490278 GRIN2CQ14957 1233 aa6.81□□□□□ -1.32
CD46-216ENST00000490278 ZNF438Q7Z4V0 828 aa6.81□□□□□ -1.32
CD46-216ENST00000490278 NLRP13Q86W25 1043 aa6.81□□□□□ -1.32
CD46-216ENST00000490278 ALKBH8Q96BT7 664 aaKnown RBP6.81□□□□□ -1.32
CD46-216ENST00000490278 NIF3L1Q9GZT8 377 aa6.81□□□□□ -1.32
CD46-216ENST00000490278 EFCC1Q9HA90 598 aa6.81□□□□□ -1.32
CD46-216ENST00000490278 SASH3O75995 380 aa6.8□□□□□ -1.32
CD46-216ENST00000490278 NEFLP07196 543 aa6.8□□□□□ -1.32
CD46-216ENST00000490278 CTBSQ01459 385 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms