RNA–Protein interactions for RNA: ENST00000490262.1

SREBF2-207, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 2

Gene SREBF2, Length 450 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-207ENST00000490262 SYNE4Q8N205 404 aa15.47■□□□□ 0.07
SREBF2-207ENST00000490262 NECTIN2Q92692 538 aa15.47■□□□□ 0.07
SREBF2-207ENST00000490262 IARSP41252 1262 aaKnown RBP15.46■□□□□ 0.07
SREBF2-207ENST00000490262 CC2D2BQ6DHV5 1058 aa15.46■□□□□ 0.07
SREBF2-207ENST00000490262 COPS6Q7L5N1 327 aa15.46■□□□□ 0.07
SREBF2-207ENST00000490262 JMYQ8N9B5 988 aa15.46■□□□□ 0.07
SREBF2-207ENST00000490262 L3MBTL3Q96JM7 780 aaPredicted RBP15.46■□□□□ 0.07
SREBF2-207ENST00000490262 PRKRIP1Q9H875 184 aaPredicted RBP15.46■□□□□ 0.07
SREBF2-207ENST00000490262 LAS1LQ9Y4W2 734 aaKnown RBP15.46■□□□□ 0.07
SREBF2-207ENST00000490262 SCN4AP35499 1836 aa15.45■□□□□ 0.06
SREBF2-207ENST00000490262 SNED1Q8TER0 1413 aa15.45■□□□□ 0.06
SREBF2-207ENST00000490262 IQCA1LA6NCM1 817 aa15.45■□□□□ 0.06
SREBF2-207ENST00000490262 AIMP1Q12904 312 aaKnown RBP15.45■□□□□ 0.06
SREBF2-207ENST00000490262 KRT24Q2M2I5 525 aa15.45■□□□□ 0.06
SREBF2-207ENST00000490262 CHADLQ6NUI6 762 aa15.45■□□□□ 0.06
SREBF2-207ENST00000490262 C3orf67Q6ZVT6 689 aa15.45■□□□□ 0.06
SREBF2-207ENST00000490262 RBM17Q96I25 401 aaKnown RBP15.45■□□□□ 0.06
SREBF2-207ENST00000490262 CRAMP1Q96RY5 1269 aa15.45■□□□□ 0.06
SREBF2-207ENST00000490262 PSMD1Q99460 953 aa15.45■□□□□ 0.06
SREBF2-207ENST00000490262 UTP14AQ9BVJ6 771 aaKnown RBP15.45■□□□□ 0.06
SREBF2-207ENST00000490262 ZNF541Q9H0D2 1346 aa15.44■□□□□ 0.06
SREBF2-207ENST00000490262 POTEIP0CG38 1075 aa15.44■□□□□ 0.06
SREBF2-207ENST00000490262 POTEJP0CG39 1038 aa15.44■□□□□ 0.06
SREBF2-207ENST00000490262 SLC10A5Q5PT55 438 aa15.44■□□□□ 0.06
SREBF2-207ENST00000490262 XAGE3Q8WTP9 111 aa15.44■□□□□ 0.06
SREBF2-207ENST00000490262 NLRP3Q96P20 1036 aa15.44■□□□□ 0.06
SREBF2-207ENST00000490262 DDX21Q9NR30 783 aaKnown RBP eCLIP15.44■□□□□ 0.06
SREBF2-207ENST00000490262 ANKRD36CQ5JPF3 1778 aa15.44■□□□□ 0.06
SREBF2-207ENST00000490262 PCNTO95613 3336 aa15.43■□□□□ 0.06
SREBF2-207ENST00000490262 FZD9O00144 591 aa15.43■□□□□ 0.06
SREBF2-207ENST00000490262 GRIPAP1Q4V328 841 aa15.43■□□□□ 0.06
SREBF2-207ENST00000490262 HSP90AB3PQ58FF7 597 aa15.43■□□□□ 0.06
SREBF2-207ENST00000490262 TAF1DQ9H5J8 278 aaPredicted RBP15.43■□□□□ 0.06
SREBF2-207ENST00000490262 TCERG1O14776 1098 aaKnown RBP15.42■□□□□ 0.06
SREBF2-207ENST00000490262 PPEF1O14829 653 aaPredicted RBP15.42■□□□□ 0.06
SREBF2-207ENST00000490262 TCIRG1Q13488 830 aa15.42■□□□□ 0.06
SREBF2-207ENST00000490262 NLRP10Q86W26 655 aa15.42■□□□□ 0.06
SREBF2-207ENST00000490262 JDP2Q8WYK2 163 aa15.42■□□□□ 0.06
SREBF2-207ENST00000490262 RNF123Q5XPI4 1314 aa15.42■□□□□ 0.06
SREBF2-207ENST00000490262 HOXB7P09629 217 aa15.41■□□□□ 0.06
SREBF2-207ENST00000490262 HDGFL1Q5TGJ6 251 aa15.41■□□□□ 0.06
SREBF2-207ENST00000490262 LDHDQ86WU2 507 aa15.41■□□□□ 0.06
SREBF2-207ENST00000490262 GPC2Q8N158 579 aa15.41■□□□□ 0.06
SREBF2-207ENST00000490262 CFAP44Q96MT7 982 aa15.41■□□□□ 0.06
SREBF2-207ENST00000490262 CHPF2Q9P2E5 772 aa15.41■□□□□ 0.06
SREBF2-207ENST00000490262 HACL1Q9UJ83 578 aa15.41■□□□□ 0.06
SREBF2-207ENST00000490262 SLC51AQ86UW1 340 aa15.4■□□□□ 0.06
SREBF2-207ENST00000490262 LAMB2P55268 1798 aa15.39■□□□□ 0.05
SREBF2-207ENST00000490262 COL4A5P29400 1685 aa15.39■□□□□ 0.05
SREBF2-207ENST00000490262 HCLS1P14317 486 aaPredicted RBP15.39■□□□□ 0.05
SREBF2-207ENST00000490262 EPHX2P34913 555 aa15.39■□□□□ 0.05
SREBF2-207ENST00000490262 EIF6P56537 245 aaKnown RBP15.39■□□□□ 0.05
SREBF2-207ENST00000490262 EAPPQ56P03 285 aaPredicted RBP15.39■□□□□ 0.05
SREBF2-207ENST00000490262 LARGE2Q8N3Y3 721 aa15.39■□□□□ 0.05
SREBF2-207ENST00000490262 TMX4Q9H1E5 349 aaPredicted RBP15.39■□□□□ 0.05
SREBF2-207ENST00000490262 DBF4Q9UBU7 674 aaPredicted RBP15.39■□□□□ 0.05
SREBF2-207ENST00000490262 TRMT112Q9UI30 125 aaKnown RBP15.39■□□□□ 0.05
SREBF2-207ENST00000490262 ATP6V0A2Q9Y487 856 aa15.39■□□□□ 0.05
SREBF2-207ENST00000490262 ABCC4O15439 1325 aa15.39■□□□□ 0.05
SREBF2-207ENST00000490262 APAF1O14727 1248 aa15.38■□□□□ 0.05
SREBF2-207ENST00000490262 DUSP27Q5VZP5 1158 aa15.38■□□□□ 0.05
SREBF2-207ENST00000490262 ANKRD13DQ6ZTN6 518 aa15.38■□□□□ 0.05
SREBF2-207ENST00000490262 PLBD2Q8NHP8 589 aa15.38■□□□□ 0.05
SREBF2-207ENST00000490262 CREBZFQ9NS37 354 aa15.38■□□□□ 0.05
SREBF2-207ENST00000490262 MBIPQ9NS73 344 aa15.38■□□□□ 0.05
SREBF2-207ENST00000490262 SH3TC1Q8TE82 1336 aa15.38■□□□□ 0.05
SREBF2-207ENST00000490262 BBOX1O75936 387 aa15.37■□□□□ 0.05
SREBF2-207ENST00000490262 ZNF853P0CG23 659 aa15.37■□□□□ 0.05
SREBF2-207ENST00000490262 PNMA8AQ86V59 439 aaPredicted RBP15.37■□□□□ 0.05
SREBF2-207ENST00000490262 CLEC11AQ9Y240 323 aa15.37■□□□□ 0.05
SREBF2-207ENST00000490262 GJA3Q9Y6H8 435 aa15.37■□□□□ 0.05
SREBF2-207ENST00000490262 PASKQ96RG2 1323 aa15.37■□□□□ 0.05
SREBF2-207ENST00000490262 ITGBL1O95965 494 aaPredicted RBP15.36■□□□□ 0.05
SREBF2-207ENST00000490262 SP8Q8IXZ3 490 aa15.36■□□□□ 0.05
SREBF2-207ENST00000490262 ZNF428Q96B54 188 aa15.36■□□□□ 0.05
SREBF2-207ENST00000490262 ISCA1Q9BUE6 129 aa15.36■□□□□ 0.05
SREBF2-207ENST00000490262 HYPKQ9NX55 129 aa15.36■□□□□ 0.05
SREBF2-207ENST00000490262 ADAMTSL1Q8N6G6 1762 aa15.36■□□□□ 0.05
SREBF2-207ENST00000490262 PPIP5K2O43314 1243 aa15.35■□□□□ 0.05
SREBF2-207ENST00000490262 GNAI1P63096 354 aa15.35■□□□□ 0.05
SREBF2-207ENST00000490262 DDX46Q7L014 1031 aaKnown RBP15.35■□□□□ 0.05
SREBF2-207ENST00000490262 NIM1KQ8IY84 436 aa15.35■□□□□ 0.05
SREBF2-207ENST00000490262 RTFDC1Q9BY42 306 aaPredicted RBP15.35■□□□□ 0.05
SREBF2-207ENST00000490262 VPS33BQ9H267 617 aa15.35■□□□□ 0.05
SREBF2-207ENST00000490262 IFT57Q9NWB7 429 aa15.35■□□□□ 0.05
SREBF2-207ENST00000490262 TAF1P21675 1872 aa15.35■□□□□ 0.05
SREBF2-207ENST00000490262 ATP5J2-PTCD1G3V325 749 aa15.34■□□□□ 0.05
SREBF2-207ENST00000490262 CALD1Q05682 793 aaKnown RBP15.34■□□□□ 0.05
SREBF2-207ENST00000490262 GRAPQ13588 217 aa15.34■□□□□ 0.05
SREBF2-207ENST00000490262 AOC3Q16853 763 aa15.34■□□□□ 0.05
SREBF2-207ENST00000490262 DPP8Q6V1X1 898 aaPredicted RBP15.34■□□□□ 0.05
SREBF2-207ENST00000490262 SUPT20HQ8NEM7 779 aa15.34■□□□□ 0.05
SREBF2-207ENST00000490262 GRAPLQ8TC17 118 aaPredicted RBP15.34■□□□□ 0.05
SREBF2-207ENST00000490262 MKRN1Q9UHC7 482 aaKnown RBP15.34■□□□□ 0.05
SREBF2-207ENST00000490262 DDX60Q8IY21 1712 aaKnown RBP15.34■□□□□ 0.05
SREBF2-207ENST00000490262 ELL2O00472 640 aaPredicted RBP15.33■□□□□ 0.04
SREBF2-207ENST00000490262 LMOD1P29536 600 aaPredicted RBP15.33■□□□□ 0.04
SREBF2-207ENST00000490262 SCNN1DP51172 638 aa15.33■□□□□ 0.04
SREBF2-207ENST00000490262 MAP1SQ66K74 1059 aaPredicted RBP15.33■□□□□ 0.04
SREBF2-207ENST00000490262 CNTROBQ8N137 903 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms