RNA–Protein interactions for RNA: ENST00000489719.1

ABCF3-217, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-217ENST00000489719 TRMT112Q9UI30 125 aaKnown RBP23.03■■□□□ 1.28
ABCF3-217ENST00000489719 KIF3CO14782 793 aa23.02■■□□□ 1.28
ABCF3-217ENST00000489719 PRELPP51888 382 aa23.02■■□□□ 1.28
ABCF3-217ENST00000489719 RIC3Q7Z5B4 369 aa23.02■■□□□ 1.28
ABCF3-217ENST00000489719 TSR2Q969E8 191 aaKnown RBP23.02■■□□□ 1.28
ABCF3-217ENST00000489719 IL16Q14005 1332 aa23.02■■□□□ 1.28
ABCF3-217ENST00000489719 ZC3H4Q9UPT8 1303 aaKnown RBP23.02■■□□□ 1.28
ABCF3-217ENST00000489719 ABCC12Q96J65 1359 aa23.01■■□□□ 1.27
ABCF3-217ENST00000489719 ANKRD31Q8N7Z5 1873 aa23.01■■□□□ 1.27
ABCF3-217ENST00000489719 HOXA10P31260 410 aaPredicted RBP23.01■■□□□ 1.27
ABCF3-217ENST00000489719 RTKN2Q8IZC4 609 aa23.01■■□□□ 1.27
ABCF3-217ENST00000489719 GOLGA2Q08379 1002 aa23■■□□□ 1.27
ABCF3-217ENST00000489719 WDR63Q8IWG1 891 aa23■■□□□ 1.27
ABCF3-217ENST00000489719 NMRK2Q9NPI5 230 aa23■■□□□ 1.27
ABCF3-217ENST00000489719 RNF123Q5XPI4 1314 aa23■■□□□ 1.27
ABCF3-217ENST00000489719 LTBP3Q9NS15 1303 aa23■■□□□ 1.27
ABCF3-217ENST00000489719 DPY19L2Q6NUT2 758 aa22.99■■□□□ 1.27
ABCF3-217ENST00000489719 C16orf71Q8IYS4 520 aaPredicted RBP22.99■■□□□ 1.27
ABCF3-217ENST00000489719 TSPYL6Q8N831 410 aa22.99■■□□□ 1.27
ABCF3-217ENST00000489719 CRAMP1Q96RY5 1269 aa22.99■■□□□ 1.27
ABCF3-217ENST00000489719 PHAXQ9H814 394 aaKnown RBP22.99■■□□□ 1.27
ABCF3-217ENST00000489719 GLTPD2A6NH11 291 aa22.98■■□□□ 1.27
ABCF3-217ENST00000489719 ATP5J2-PTCD1G3V325 749 aa22.98■■□□□ 1.27
ABCF3-217ENST00000489719 CC2D2BQ6DHV5 1058 aa22.98■■□□□ 1.27
ABCF3-217ENST00000489719 TMX4Q9H1E5 349 aaPredicted RBP22.98■■□□□ 1.27
ABCF3-217ENST00000489719 RRAGCQ9HB90 399 aa22.98■■□□□ 1.27
ABCF3-217ENST00000489719 SH3TC1Q8TE82 1336 aa22.98■■□□□ 1.27
ABCF3-217ENST00000489719 DDX58O95786 925 aaKnown RBP22.97■■□□□ 1.27
ABCF3-217ENST00000489719 HCLS1P14317 486 aaPredicted RBP22.97■■□□□ 1.27
ABCF3-217ENST00000489719 ISCA1Q9BUE6 129 aa22.97■■□□□ 1.27
ABCF3-217ENST00000489719 STK31Q9BXU1 1019 aa22.97■■□□□ 1.27
ABCF3-217ENST00000489719 DLEC1Q9Y238 1755 aa22.96■■□□□ 1.27
ABCF3-217ENST00000489719 NUP98P52948 1817 aa22.96■■□□□ 1.27
ABCF3-217ENST00000489719 TOMM70O94826 608 aa22.96■■□□□ 1.27
ABCF3-217ENST00000489719 FKBP4Q02790 459 aaKnown RBP eCLIP22.96■■□□□ 1.27
ABCF3-217ENST00000489719 TWISTNBQ3B726 338 aaPredicted RBP22.96■■□□□ 1.27
ABCF3-217ENST00000489719 C3orf67Q6ZVT6 689 aa22.96■■□□□ 1.27
ABCF3-217ENST00000489719 TRIM28Q13263 835 aaKnown RBP22.95■■□□□ 1.26
ABCF3-217ENST00000489719 RIC1Q4ADV7 1423 aa22.95■■□□□ 1.26
ABCF3-217ENST00000489719 OLFM4Q6UX06 510 aa22.95■■□□□ 1.26
ABCF3-217ENST00000489719 SYNE4Q8N205 404 aa22.95■■□□□ 1.26
ABCF3-217ENST00000489719 ZNF428Q96B54 188 aa22.95■■□□□ 1.26
ABCF3-217ENST00000489719 TCERG1O14776 1098 aaKnown RBP22.94■■□□□ 1.26
ABCF3-217ENST00000489719 GRIPAP1Q4V328 841 aa22.94■■□□□ 1.26
ABCF3-217ENST00000489719 FAM89AQ96GI7 184 aa22.93■■□□□ 1.26
ABCF3-217ENST00000489719 ZNF277Q9NRM2 450 aaPredicted RBP22.93■■□□□ 1.26
ABCF3-217ENST00000489719 COL11A2P13942 1736 aaPredicted RBP22.93■■□□□ 1.26
ABCF3-217ENST00000489719 SLX4Q8IY92 1834 aa22.92■■□□□ 1.26
ABCF3-217ENST00000489719 PPEF1O14829 653 aaPredicted RBP22.92■■□□□ 1.26
ABCF3-217ENST00000489719 BBOX1O75936 387 aa22.92■■□□□ 1.26
ABCF3-217ENST00000489719 VEGFAP15692 232 aaPredicted RBP22.92■■□□□ 1.26
ABCF3-217ENST00000489719 DDX46Q7L014 1031 aaKnown RBP22.92■■□□□ 1.26
ABCF3-217ENST00000489719 MYD88Q99836 296 aa22.92■■□□□ 1.26
ABCF3-217ENST00000489719 SLC4A2P04920 1241 aa22.91■■□□□ 1.26
ABCF3-217ENST00000489719 HSP90B1P14625 803 aaKnown RBP22.9■■□□□ 1.26
ABCF3-217ENST00000489719 RTL5Q5HYW3 569 aaPredicted RBP22.9■■□□□ 1.26
ABCF3-217ENST00000489719 PSMD1Q99460 953 aa22.9■■□□□ 1.26
ABCF3-217ENST00000489719 FANCIQ9NVI1 1328 aa22.89■■□□□ 1.26
ABCF3-217ENST00000489719 KSR2Q6VAB6 950 aa22.89■■□□□ 1.25
ABCF3-217ENST00000489719 CCDC191Q8NCU4 936 aa22.89■■□□□ 1.25
ABCF3-217ENST00000489719 METTL22Q9BUU2 404 aaPredicted RBP22.89■■□□□ 1.25
ABCF3-217ENST00000489719 MYH16Q9H6N6 1097 aa22.89■■□□□ 1.25
ABCF3-217ENST00000489719 IRS4O14654 1257 aaPredicted RBP22.88■■□□□ 1.25
ABCF3-217ENST00000489719 IARSP41252 1262 aaKnown RBP22.88■■□□□ 1.25
ABCF3-217ENST00000489719 EXOSC9Q06265 439 aaKnown RBP22.88■■□□□ 1.25
ABCF3-217ENST00000489719 ZBTB38Q8NAP3 1195 aaPredicted RBP22.88■■□□□ 1.25
ABCF3-217ENST00000489719 RBM46Q8TBY0 533 aaKnown RBP22.88■■□□□ 1.25
ABCF3-217ENST00000489719 MAP3K2Q9Y2U5 619 aa22.88■■□□□ 1.25
ABCF3-217ENST00000489719 ATP6V0A2Q9Y487 856 aa22.88■■□□□ 1.25
ABCF3-217ENST00000489719 ABCC4O15439 1325 aa22.87■■□□□ 1.25
ABCF3-217ENST00000489719 PI4KAP2A4QPH2 592 aa22.87■■□□□ 1.25
ABCF3-217ENST00000489719 HSPA6P17066 643 aa22.87■■□□□ 1.25
ABCF3-217ENST00000489719 PI4KAP1Q8N8J0 262 aa22.87■■□□□ 1.25
ABCF3-217ENST00000489719 JDP2Q8WYK2 163 aa22.87■■□□□ 1.25
ABCF3-217ENST00000489719 CWC25Q9NXE8 425 aaPredicted RBP22.87■■□□□ 1.25
ABCF3-217ENST00000489719 SBF1O95248 1867 aa22.87■■□□□ 1.25
ABCF3-217ENST00000489719 VAMP4O75379 141 aa22.86■■□□□ 1.25
ABCF3-217ENST00000489719 NEXNQ0ZGT2 675 aa22.86■■□□□ 1.25
ABCF3-217ENST00000489719 GRAPQ13588 217 aa22.86■■□□□ 1.25
ABCF3-217ENST00000489719 SF3B3Q15393 1217 aaKnown RBP22.86■■□□□ 1.25
ABCF3-217ENST00000489719 SP8Q8IXZ3 490 aa22.86■■□□□ 1.25
ABCF3-217ENST00000489719 GRAPLQ8TC17 118 aaPredicted RBP22.86■■□□□ 1.25
ABCF3-217ENST00000489719 DDNO94850 711 aaPredicted RBP22.85■■□□□ 1.25
ABCF3-217ENST00000489719 TNRC6CQ9HCJ0 1690 aaKnown RBP22.84■■□□□ 1.25
ABCF3-217ENST00000489719 FSTL1Q12841 308 aa22.84■■□□□ 1.25
ABCF3-217ENST00000489719 G2E3Q7L622 706 aa22.84■■□□□ 1.25
ABCF3-217ENST00000489719 SPINK5Q9NQ38 1064 aaPredicted RBP22.84■■□□□ 1.25
ABCF3-217ENST00000489719 PCCAP05165 728 aaPredicted RBP22.83■■□□□ 1.25
ABCF3-217ENST00000489719 TMC4Q7Z404 712 aa22.83■■□□□ 1.25
ABCF3-217ENST00000489719 LARGE2Q8N3Y3 721 aa22.83■■□□□ 1.25
ABCF3-217ENST00000489719 SUPT20HQ8NEM7 779 aa22.83■■□□□ 1.25
ABCF3-217ENST00000489719 FER1L6Q2WGJ9 1857 aa22.82■■□□□ 1.24
ABCF3-217ENST00000489719 DPP8Q6V1X1 898 aaPredicted RBP22.82■■□□□ 1.24
ABCF3-217ENST00000489719 MPNDQ8N594 471 aa22.82■■□□□ 1.24
ABCF3-217ENST00000489719 POTECB2RU33 542 aa22.81■■□□□ 1.24
ABCF3-217ENST00000489719 FZD9O00144 591 aa22.81■■□□□ 1.24
ABCF3-217ENST00000489719 FLIIQ13045 1269 aa22.81■■□□□ 1.24
ABCF3-217ENST00000489719 SMC1BQ8NDV3 1235 aa22.81■■□□□ 1.24
ABCF3-217ENST00000489719 JARID2Q92833 1246 aaPredicted RBP22.81■■□□□ 1.24
ABCF3-217ENST00000489719 VPS33BQ9H267 617 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms