RNA–Protein interactions for RNA: ENST00000489678.1

ABCD4-214, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 3,008 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-214ENST00000489678 OLFM4Q6UX06 510 aa12.8□□□□□ -0.36
ABCD4-214ENST00000489678 PPP1R42Q7Z4L9 355 aa12.8□□□□□ -0.36
ABCD4-214ENST00000489678 PKD1L3Q7Z443 1732 aa12.8□□□□□ -0.36
ABCD4-214ENST00000489678 DDX58O95786 925 aaKnown RBP12.8□□□□□ -0.36
ABCD4-214ENST00000489678 SUSD4Q5VX71 490 aa12.8□□□□□ -0.36
ABCD4-214ENST00000489678 ARHGAP45Q92619 1136 aa12.8□□□□□ -0.36
ABCD4-214ENST00000489678 ABCC4O15439 1325 aa12.8□□□□□ -0.36
ABCD4-214ENST00000489678 LMBR1LQ6UX01 489 aa12.8□□□□□ -0.36
ABCD4-214ENST00000489678 NWD2Q9ULI1 1742 aa12.79□□□□□ -0.36
ABCD4-214ENST00000489678 EIF5P55010 431 aaKnown RBP12.79□□□□□ -0.36
ABCD4-214ENST00000489678 GCKRQ14397 625 aa12.79□□□□□ -0.36
ABCD4-214ENST00000489678 TRAPPC3LQ5T215 181 aa12.79□□□□□ -0.36
ABCD4-214ENST00000489678 COL23A1Q86Y22 540 aaPredicted RBP12.79□□□□□ -0.36
ABCD4-214ENST00000489678 KAZALD1Q96I82 304 aa12.79□□□□□ -0.36
ABCD4-214ENST00000489678 SEC31BQ9NQW1 1179 aa12.79□□□□□ -0.36
ABCD4-214ENST00000489678 SMARCC1Q92922 1105 aaPredicted RBP12.78□□□□□ -0.36
ABCD4-214ENST00000489678 METTL22Q9BUU2 404 aaPredicted RBP12.78□□□□□ -0.36
ABCD4-214ENST00000489678 CEP350Q5VT06 3117 aa12.78□□□□□ -0.36
ABCD4-214ENST00000489678 GRM8O00222 908 aa12.78□□□□□ -0.36
ABCD4-214ENST00000489678 SURF6O75683 361 aaKnown RBP12.78□□□□□ -0.36
ABCD4-214ENST00000489678 PUS3Q9BZE2 481 aaKnown RBP12.78□□□□□ -0.36
ABCD4-214ENST00000489678 JAG2Q9Y219 1238 aa12.78□□□□□ -0.36
ABCD4-214ENST00000489678 COL15A1P39059 1388 aa12.78□□□□□ -0.36
ABCD4-214ENST00000489678 BCL2L12Q9HB09 334 aa12.78□□□□□ -0.36
ABCD4-214ENST00000489678 NUCB1Q02818 461 aa12.77□□□□□ -0.36
ABCD4-214ENST00000489678 ERFEQ4G0M1 354 aa12.77□□□□□ -0.36
ABCD4-214ENST00000489678 PLBD2Q8NHP8 589 aa12.77□□□□□ -0.36
ABCD4-214ENST00000489678 TBC1D32Q96NH3 1257 aa12.77□□□□□ -0.36
ABCD4-214ENST00000489678 GPR101Q96P66 508 aaPredicted RBP12.77□□□□□ -0.36
ABCD4-214ENST00000489678 IQSEC3Q9UPP2 1182 aaPredicted RBP12.77□□□□□ -0.37
ABCD4-214ENST00000489678 PTPRCP08575 1304 aa12.76□□□□□ -0.37
ABCD4-214ENST00000489678 CAMTA2O94983 1202 aa12.76□□□□□ -0.37
ABCD4-214ENST00000489678 CEP85Q6P2H3 762 aa12.76□□□□□ -0.37
ABCD4-214ENST00000489678 SOS1Q07889 1333 aaPredicted RBP12.76□□□□□ -0.37
ABCD4-214ENST00000489678 MAP3K15Q6ZN16 1313 aa12.76□□□□□ -0.37
ABCD4-214ENST00000489678 GNAI2P04899 355 aa12.76□□□□□ -0.37
ABCD4-214ENST00000489678 INTS3Q68E01 1043 aaKnown RBP12.76□□□□□ -0.37
ABCD4-214ENST00000489678 NFKBIBQ15653 356 aa12.75□□□□□ -0.37
ABCD4-214ENST00000489678 NBPF5PQ86XG9 351 aaPredicted RBP12.75□□□□□ -0.37
ABCD4-214ENST00000489678 LINS1Q8NG48 757 aa12.75□□□□□ -0.37
ABCD4-214ENST00000489678 CWC25Q9NXE8 425 aaPredicted RBP12.75□□□□□ -0.37
ABCD4-214ENST00000489678 TAF5LO75529 589 aa12.75□□□□□ -0.37
ABCD4-214ENST00000489678 TCIRG1Q13488 830 aa12.75□□□□□ -0.37
ABCD4-214ENST00000489678 NLRP10Q86W26 655 aa12.75□□□□□ -0.37
ABCD4-214ENST00000489678 GREM2Q9H772 168 aa12.75□□□□□ -0.37
ABCD4-214ENST00000489678 BTAF1O14981 1849 aa12.75□□□□□ -0.37
ABCD4-214ENST00000489678 CCT4P50991 539 aaKnown RBP12.75□□□□□ -0.37
ABCD4-214ENST00000489678 LRRC24Q50LG9 513 aa12.75□□□□□ -0.37
ABCD4-214ENST00000489678 IRS4O14654 1257 aaPredicted RBP12.74□□□□□ -0.37
ABCD4-214ENST00000489678 NFIXQ14938 502 aa12.74□□□□□ -0.37
ABCD4-214ENST00000489678 CHD1LQ86WJ1 897 aa12.74□□□□□ -0.37
ABCD4-214ENST00000489678 CCDC8Q9H0W5 538 aaPredicted RBP12.74□□□□□ -0.37
ABCD4-214ENST00000489678 MRC1P22897 1456 aa12.74□□□□□ -0.37
ABCD4-214ENST00000489678 ABCC6O95255 1503 aa12.74□□□□□ -0.37
ABCD4-214ENST00000489678 CHGBP05060 677 aa12.74□□□□□ -0.37
ABCD4-214ENST00000489678 IL6STP40189 918 aaPredicted RBP12.74□□□□□ -0.37
ABCD4-214ENST00000489678 GIGYF2Q6Y7W6 1299 aaKnown RBP12.74□□□□□ -0.37
ABCD4-214ENST00000489678 BABAM1Q9NWV8 329 aa12.74□□□□□ -0.37
ABCD4-214ENST00000489678 KDM3BQ7LBC6 1761 aa12.74□□□□□ -0.37
ABCD4-214ENST00000489678 HOXB7P09629 217 aa12.73□□□□□ -0.37
ABCD4-214ENST00000489678 SETDB2Q96T68 719 aa12.73□□□□□ -0.37
ABCD4-214ENST00000489678 MMP10P09238 476 aa12.73□□□□□ -0.37
ABCD4-214ENST00000489678 BAG6P46379 1132 aa12.73□□□□□ -0.37
ABCD4-214ENST00000489678 TAF7LQ5H9L4 462 aa12.73□□□□□ -0.37
ABCD4-214ENST00000489678 TEX13AQ9BXU3 409 aaPredicted RBP12.72□□□□□ -0.37
ABCD4-214ENST00000489678 RPS6KA4O75676 772 aa12.72□□□□□ -0.37
ABCD4-214ENST00000489678 VSIG10Q8N0Z9 540 aa12.72□□□□□ -0.37
ABCD4-214ENST00000489678 EDC3Q96F86 508 aaKnown RBP12.72□□□□□ -0.37
ABCD4-214ENST00000489678 CAMKK2Q96RR4 588 aa12.72□□□□□ -0.37
ABCD4-214ENST00000489678 UPF2Q9HAU5 1272 aaKnown RBP12.72□□□□□ -0.37
ABCD4-214ENST00000489678 TLR7Q9NYK1 1049 aaKnown RBP12.72□□□□□ -0.37
ABCD4-214ENST00000489678 THSD7AQ9UPZ6 1657 aa12.72□□□□□ -0.37
ABCD4-214ENST00000489678 GYS1P13807 737 aa12.72□□□□□ -0.37
ABCD4-214ENST00000489678 MFAP1P55081 439 aaKnown RBP12.72□□□□□ -0.37
ABCD4-214ENST00000489678 SLFNL1Q499Z3 407 aa12.72□□□□□ -0.37
ABCD4-214ENST00000489678 NEUROD6Q96NK8 337 aa12.72□□□□□ -0.37
ABCD4-214ENST00000489678 CHRNA5P30532 468 aa12.71□□□□□ -0.37
ABCD4-214ENST00000489678 TIMM10P62072 90 aa12.71□□□□□ -0.37
ABCD4-214ENST00000489678 DDR1Q08345 913 aa12.71□□□□□ -0.38
ABCD4-214ENST00000489678 UPF1Q92900 1129 aaKnown RBP eCLIP12.71□□□□□ -0.38
ABCD4-214ENST00000489678 SIPA1L3O60292 1781 aaPredicted RBP12.71□□□□□ -0.38
ABCD4-214ENST00000489678 TBC1D2Q9BYX2 928 aa12.7□□□□□ -0.38
ABCD4-214ENST00000489678 GCC1Q96CN9 775 aa12.7□□□□□ -0.38
ABCD4-214ENST00000489678 CARMIL3Q8ND23 1372 aa12.7□□□□□ -0.38
ABCD4-214ENST00000489678 FRAT2O75474 233 aaPredicted RBP12.7□□□□□ -0.38
ABCD4-214ENST00000489678 ANKRD44Q8N8A2 993 aa12.7□□□□□ -0.38
ABCD4-214ENST00000489678 C22orf23Q9BZE7 217 aa12.7□□□□□ -0.38
ABCD4-214ENST00000489678 CHMP4BQ9H444 224 aaKnown RBP12.7□□□□□ -0.38
ABCD4-214ENST00000489678 SNRKQ9NRH2 765 aa12.7□□□□□ -0.38
ABCD4-214ENST00000489678 PNPLA7Q6ZV29 1317 aa12.69□□□□□ -0.38
ABCD4-214ENST00000489678 SLC15A2Q16348 729 aa12.69□□□□□ -0.38
ABCD4-214ENST00000489678 ABCC12Q96J65 1359 aa12.69□□□□□ -0.38
ABCD4-214ENST00000489678 GNAI3P08754 354 aa12.69□□□□□ -0.38
ABCD4-214ENST00000489678 PI16Q6UXB8 463 aa12.69□□□□□ -0.38
ABCD4-214ENST00000489678 ITGA6P23229 1130 aa12.68□□□□□ -0.38
ABCD4-214ENST00000489678 BECN1Q14457 450 aa12.68□□□□□ -0.38
ABCD4-214ENST00000489678 UTP14AQ9BVJ6 771 aaKnown RBP12.68□□□□□ -0.38
ABCD4-214ENST00000489678 ATP10DQ9P241 1426 aa12.68□□□□□ -0.38
ABCD4-214ENST00000489678 HSP90AB3PQ58FF7 597 aa12.68□□□□□ -0.38
ABCD4-214ENST00000489678 SPRYD3Q8NCJ5 442 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms