RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 NBPF4Q96M43 638 aa7.98□□□□□ -1.13
SF3A3-208ENST00000489537 BCL2L13Q9BXK5 485 aa7.98□□□□□ -1.13
SF3A3-208ENST00000489537 UPF2Q9HAU5 1272 aaKnown RBP7.98□□□□□ -1.13
SF3A3-208ENST00000489537 ZBTB40Q9NUA8 1239 aa7.98□□□□□ -1.13
SF3A3-208ENST00000489537 TRIM37O94972 964 aa7.97□□□□□ -1.13
SF3A3-208ENST00000489537 GNAI3P08754 354 aa7.97□□□□□ -1.13
SF3A3-208ENST00000489537 CSB-PGBD3P0DP91 1061 aa7.97□□□□□ -1.13
SF3A3-208ENST00000489537 EZH2Q15910 746 aaKnown RBP7.97□□□□□ -1.13
SF3A3-208ENST00000489537 C8orf58Q8NAV2 365 aa7.97□□□□□ -1.13
SF3A3-208ENST00000489537 BACH2Q9BYV9 841 aa7.97□□□□□ -1.13
SF3A3-208ENST00000489537 COL5A2P05997 1499 aaPredicted RBP7.97□□□□□ -1.13
SF3A3-208ENST00000489537 FAM208AQ9UK61 1670 aaKnown RBP7.97□□□□□ -1.13
SF3A3-208ENST00000489537 TMEM57Q8N5G2 664 aa7.96□□□□□ -1.14
SF3A3-208ENST00000489537 CAMKK2Q96RR4 588 aa7.96□□□□□ -1.14
SF3A3-208ENST00000489537 THUMPD2Q9BTF0 503 aaKnown RBP7.96□□□□□ -1.14
SF3A3-208ENST00000489537 KIAA1468Q9P260 1216 aa7.96□□□□□ -1.14
SF3A3-208ENST00000489537 RGPD5Q99666 1765 aa7.96□□□□□ -1.14
SF3A3-208ENST00000489537 LTN1O94822 1766 aa7.95□□□□□ -1.14
SF3A3-208ENST00000489537 ZBTB7CA1YPR0 619 aa7.95□□□□□ -1.14
SF3A3-208ENST00000489537 TRIM6-TRIM34B2RNG4 842 aa7.95□□□□□ -1.14
SF3A3-208ENST00000489537 ZBTB7BO15156 539 aaPredicted RBP7.95□□□□□ -1.14
SF3A3-208ENST00000489537 RLBP1P12271 317 aa7.95□□□□□ -1.14
SF3A3-208ENST00000489537 DCTN1Q14203 1278 aa7.95□□□□□ -1.14
SF3A3-208ENST00000489537 SMC5Q8IY18 1101 aa7.95□□□□□ -1.14
SF3A3-208ENST00000489537 IFNL2Q8IZJ0 200 aa7.95□□□□□ -1.14
SF3A3-208ENST00000489537 DCAF5Q96JK2 942 aa7.95□□□□□ -1.14
SF3A3-208ENST00000489537 NLRP2Q9NX02 1062 aa7.95□□□□□ -1.14
SF3A3-208ENST00000489537 IBTKQ9P2D0 1353 aaPredicted RBP7.95□□□□□ -1.14
SF3A3-208ENST00000489537 PXDNLA1KZ92 1463 aa7.94□□□□□ -1.14
SF3A3-208ENST00000489537 BTBD11A6QL63 1104 aa7.94□□□□□ -1.14
SF3A3-208ENST00000489537 RNMTO43148 476 aaKnown RBP7.94□□□□□ -1.14
SF3A3-208ENST00000489537 DDX58O95786 925 aaKnown RBP7.94□□□□□ -1.14
SF3A3-208ENST00000489537 R3HDM1Q15032 1099 aaKnown RBP7.94□□□□□ -1.14
SF3A3-208ENST00000489537 HDGFL1Q5TGJ6 251 aa7.94□□□□□ -1.14
SF3A3-208ENST00000489537 BARGINQ6ZT62 677 aa7.94□□□□□ -1.14
SF3A3-208ENST00000489537 ERICH6Q7L0X2 663 aa7.94□□□□□ -1.14
SF3A3-208ENST00000489537 PACS2Q86VP3 889 aa7.94□□□□□ -1.14
SF3A3-208ENST00000489537 TSPYL6Q8N831 410 aa7.94□□□□□ -1.14
SF3A3-208ENST00000489537 IL17REQ8NFR9 667 aa7.94□□□□□ -1.14
SF3A3-208ENST00000489537 DBF4Q9UBU7 674 aaPredicted RBP7.94□□□□□ -1.14
SF3A3-208ENST00000489537 DAXXQ9UER7 740 aaPredicted RBP7.94□□□□□ -1.14
SF3A3-208ENST00000489537 DISP2A7MBM2 1401 aa7.94□□□□□ -1.14
SF3A3-208ENST00000489537 DLG5Q8TDM6 1919 aa7.93□□□□□ -1.14
SF3A3-208ENST00000489537 LRRC37A3O60309 1634 aa7.93□□□□□ -1.14
SF3A3-208ENST00000489537 ELL2O00472 640 aaPredicted RBP7.93□□□□□ -1.14
SF3A3-208ENST00000489537 EVA1CP58658 441 aa7.93□□□□□ -1.14
SF3A3-208ENST00000489537 NYAP1Q6ZVC0 841 aa7.93□□□□□ -1.14
SF3A3-208ENST00000489537 MARCH10Q8NA82 808 aaPredicted RBP7.93□□□□□ -1.14
SF3A3-208ENST00000489537 IL27Q8NEV9 243 aa7.93□□□□□ -1.14
SF3A3-208ENST00000489537 ZFRQ96KR1 1074 aaKnown RBP7.93□□□□□ -1.14
SF3A3-208ENST00000489537 PDGFDQ9GZP0 370 aaPredicted RBP7.93□□□□□ -1.14
SF3A3-208ENST00000489537 HYPKQ9NX55 129 aa7.93□□□□□ -1.14
SF3A3-208ENST00000489537 ARIH1Q9Y4X5 557 aaPredicted RBP7.93□□□□□ -1.14
SF3A3-208ENST00000489537 PCDHB15Q9Y5E8 787 aa7.93□□□□□ -1.14
SF3A3-208ENST00000489537 WDR17Q8IZU2 1322 aa7.93□□□□□ -1.14
SF3A3-208ENST00000489537 SOWAHBA6NEL2 793 aa7.92□□□□□ -1.14
SF3A3-208ENST00000489537 GRXCR2A6NFK2 248 aa7.92□□□□□ -1.14
SF3A3-208ENST00000489537 EIF4A1P60842 406 aaKnown RBP7.92□□□□□ -1.14
SF3A3-208ENST00000489537 FLIIQ13045 1269 aa7.92□□□□□ -1.14
SF3A3-208ENST00000489537 IFFO2Q5TF58 517 aa7.92□□□□□ -1.14
SF3A3-208ENST00000489537 TTC5Q8N0Z6 440 aa7.92□□□□□ -1.14
SF3A3-208ENST00000489537 CDCA7Q9BWT1 371 aaPredicted RBP7.92□□□□□ -1.14
SF3A3-208ENST00000489537 CARD10Q9BWT7 1032 aa7.92□□□□□ -1.14
SF3A3-208ENST00000489537 ERBB4Q15303 1308 aa7.92□□□□□ -1.14
SF3A3-208ENST00000489537 PCDH11XQ9BZA7 1347 aa7.92□□□□□ -1.14
SF3A3-208ENST00000489537 PCDH11YQ9BZA8 1340 aa7.92□□□□□ -1.14
SF3A3-208ENST00000489537 NUP188Q5SRE5 1749 aa7.92□□□□□ -1.14
SF3A3-208ENST00000489537 PARP4Q9UKK3 1724 aaKnown RBP7.92□□□□□ -1.14
SF3A3-208ENST00000489537 ERVV-2B6SEH9 535 aa7.91□□□□□ -1.14
SF3A3-208ENST00000489537 ALDH1L1O75891 902 aa7.91□□□□□ -1.14
SF3A3-208ENST00000489537 APBA3O96018 575 aa7.91□□□□□ -1.14
SF3A3-208ENST00000489537 IGHDP01880 384 aa7.91□□□□□ -1.14
SF3A3-208ENST00000489537 GNAI2P04899 355 aa7.91□□□□□ -1.14
SF3A3-208ENST00000489537 BAG6P46379 1132 aa7.91□□□□□ -1.14
SF3A3-208ENST00000489537 NUCB1Q02818 461 aa7.91□□□□□ -1.14
SF3A3-208ENST00000489537 SF3B2Q13435 895 aaKnown RBP7.91□□□□□ -1.14
SF3A3-208ENST00000489537 FKBP5Q13451 457 aaPredicted RBP7.91□□□□□ -1.14
SF3A3-208ENST00000489537 HSP90AB4PQ58FF6 505 aa7.91□□□□□ -1.14
SF3A3-208ENST00000489537 FAM196AQ6ZSG2 479 aa7.91□□□□□ -1.14
SF3A3-208ENST00000489537 ANKRD44Q8N8A2 993 aa7.91□□□□□ -1.14
SF3A3-208ENST00000489537 IPO9Q96P70 1041 aaKnown RBP7.91□□□□□ -1.14
SF3A3-208ENST00000489537 SLC52A2Q9HAB3 445 aa7.91□□□□□ -1.14
SF3A3-208ENST00000489537 SEPT9Q9UHD8 586 aaPredicted RBP7.91□□□□□ -1.14
SF3A3-208ENST00000489537 RREB1Q92766 1687 aa7.91□□□□□ -1.14
SF3A3-208ENST00000489537 CACNA1FO60840 1977 aa7.91□□□□□ -1.14
SF3A3-208ENST00000489537 SBF2Q86WG5 1849 aa7.9□□□□□ -1.14
SF3A3-208ENST00000489537 LRP5O75197 1615 aa7.9□□□□□ -1.14
SF3A3-208ENST00000489537 IL2RBP14784 551 aa7.9□□□□□ -1.14
SF3A3-208ENST00000489537 PHKG2P15735 406 aa7.9□□□□□ -1.14
SF3A3-208ENST00000489537 RGS3P49796 1198 aa7.9□□□□□ -1.14
SF3A3-208ENST00000489537 CASC1Q6TDU7 716 aa7.9□□□□□ -1.14
SF3A3-208ENST00000489537 TOM1L2Q6ZVM7 507 aa7.9□□□□□ -1.14
SF3A3-208ENST00000489537 CHD1LQ86WJ1 897 aa7.9□□□□□ -1.14
SF3A3-208ENST00000489537 USHBP1Q8N6Y0 703 aa7.9□□□□□ -1.14
SF3A3-208ENST00000489537 LRCH3Q96II8 777 aa7.9□□□□□ -1.14
SF3A3-208ENST00000489537 TEX13AQ9BXU3 409 aaPredicted RBP7.9□□□□□ -1.14
SF3A3-208ENST00000489537 DCTPP1Q9H773 170 aa7.9□□□□□ -1.14
SF3A3-208ENST00000489537 PDZRN3Q9UPQ7 1066 aa7.9□□□□□ -1.14
SF3A3-208ENST00000489537 WNK3Q9BYP7 1800 aa7.89□□□□□ -1.15
SF3A3-208ENST00000489537 HEG1Q9ULI3 1381 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms