RNA–Protein interactions for RNA: ENST00000489390.1

SHOC2-205, Transcript of SHOC2, leucine rich repeat scaffold protein, humanhuman

TSL 5

Gene SHOC2, Length 815 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOC2-205ENST00000489390 SAPCD2Q86UD0 394 aa19.19■□□□□ 0.66
SHOC2-205ENST00000489390 PIP4K2AP48426 406 aaPredicted RBP19.18■□□□□ 0.66
SHOC2-205ENST00000489390 DGKZQ13574 1117 aa19.18■□□□□ 0.66
SHOC2-205ENST00000489390 BTBD11A6QL63 1104 aa19.17■□□□□ 0.66
SHOC2-205ENST00000489390 KCNQ3O43525 872 aa19.17■□□□□ 0.66
SHOC2-205ENST00000489390 EIF4G2P78344 907 aaKnown RBP eCLIP19.17■□□□□ 0.66
SHOC2-205ENST00000489390 CRY2Q49AN0 593 aa19.17■□□□□ 0.66
SHOC2-205ENST00000489390 LARGE2Q8N3Y3 721 aa19.16■□□□□ 0.66
SHOC2-205ENST00000489390 FAM177BA6PVY3 158 aa19.15■□□□□ 0.66
SHOC2-205ENST00000489390 HSPA5P11021 654 aaKnown RBP19.15■□□□□ 0.66
SHOC2-205ENST00000489390 GTF2E1P29083 439 aaPredicted RBP19.15■□□□□ 0.66
SHOC2-205ENST00000489390 ADARB2Q9NS39 739 aaKnown RBP19.15■□□□□ 0.66
SHOC2-205ENST00000489390 CELF2O95319 508 aaKnown RBP19.14■□□□□ 0.65
SHOC2-205ENST00000489390 GPRC5DQ9NZD1 345 aa19.14■□□□□ 0.65
SHOC2-205ENST00000489390 PRAMEF22A3QJZ6 481 aa19.13■□□□□ 0.65
SHOC2-205ENST00000489390 SNRPA1P09661 255 aaKnown RBP19.13■□□□□ 0.65
SHOC2-205ENST00000489390 NYXQ9GZU5 481 aa19.13■□□□□ 0.65
SHOC2-205ENST00000489390 NUP98P52948 1817 aa19.13■□□□□ 0.65
SHOC2-205ENST00000489390 COL3A1P02461 1466 aaPredicted RBP19.12■□□□□ 0.65
SHOC2-205ENST00000489390 RIC1Q4ADV7 1423 aa19.12■□□□□ 0.65
SHOC2-205ENST00000489390 ABCC12Q96J65 1359 aa19.12■□□□□ 0.65
SHOC2-205ENST00000489390 NBPF26B4DH59 902 aa19.12■□□□□ 0.65
SHOC2-205ENST00000489390 HOXA10P31260 410 aaPredicted RBP19.12■□□□□ 0.65
SHOC2-205ENST00000489390 CIAPIN1Q6FI81 312 aa19.12■□□□□ 0.65
SHOC2-205ENST00000489390 NBPF10Q6P3W6 841 aaKnown RBP19.12■□□□□ 0.65
SHOC2-205ENST00000489390 NIM1KQ8IY84 436 aa19.12■□□□□ 0.65
SHOC2-205ENST00000489390 NBPF15Q8N660 670 aa19.12■□□□□ 0.65
SHOC2-205ENST00000489390 HLFQ16534 295 aa19.11■□□□□ 0.65
SHOC2-205ENST00000489390 RPGRQ92834 1020 aaKnown RBP19.11■□□□□ 0.65
SHOC2-205ENST00000489390 PGAP2Q9UHJ9 254 aa19.11■□□□□ 0.65
SHOC2-205ENST00000489390 KIF7Q2M1P5 1343 aa19.1■□□□□ 0.65
SHOC2-205ENST00000489390 NOGQ13253 232 aa19.1■□□□□ 0.65
SHOC2-205ENST00000489390 VPS33BQ9H267 617 aa19.1■□□□□ 0.65
SHOC2-205ENST00000489390 LAMB4A4D0S4 1761 aa19.09■□□□□ 0.65
SHOC2-205ENST00000489390 U2SURPO15042 1029 aaKnown RBP19.09■□□□□ 0.65
SHOC2-205ENST00000489390 ZC3H15Q8WU90 426 aaKnown RBP19.09■□□□□ 0.65
SHOC2-205ENST00000489390 GLIS2Q9BZE0 524 aaPredicted RBP19.09■□□□□ 0.65
SHOC2-205ENST00000489390 NPC1L1Q9UHC9 1359 aa19.08■□□□□ 0.65
SHOC2-205ENST00000489390 PPIP5K2O43314 1243 aa19.08■□□□□ 0.64
SHOC2-205ENST00000489390 NUTM1Q86Y26 1132 aa19.08■□□□□ 0.64
SHOC2-205ENST00000489390 CRAMP1Q96RY5 1269 aa19.08■□□□□ 0.64
SHOC2-205ENST00000489390 IBTKQ9P2D0 1353 aaPredicted RBP19.07■□□□□ 0.64
SHOC2-205ENST00000489390 CDHR2Q9BYE9 1310 aa19.07■□□□□ 0.64
SHOC2-205ENST00000489390 PPEF1O14829 653 aaPredicted RBP19.07■□□□□ 0.64
SHOC2-205ENST00000489390 PRPF38BQ5VTL8 546 aaKnown RBP19.07■□□□□ 0.64
SHOC2-205ENST00000489390 RBM17Q96I25 401 aaKnown RBP19.07■□□□□ 0.64
SHOC2-205ENST00000489390 ZNF408Q9H9D4 720 aa19.07■□□□□ 0.64
SHOC2-205ENST00000489390 AKAP11Q9UKA4 1901 aa19.06■□□□□ 0.64
SHOC2-205ENST00000489390 CXCL9Q07325 125 aa19.06■□□□□ 0.64
SHOC2-205ENST00000489390 CDC37L1Q7L3B6 337 aa19.06■□□□□ 0.64
SHOC2-205ENST00000489390 ZNRF3Q9ULT6 936 aa19.06■□□□□ 0.64
SHOC2-205ENST00000489390 ERVV-1B6SEH8 477 aa19.05■□□□□ 0.64
SHOC2-205ENST00000489390 GMPSP49915 693 aaPredicted RBP19.05■□□□□ 0.64
SHOC2-205ENST00000489390 SOX10P56693 466 aa19.05■□□□□ 0.64
SHOC2-205ENST00000489390 AOC3Q16853 763 aa19.05■□□□□ 0.64
SHOC2-205ENST00000489390 PHACTR3Q96KR7 559 aa19.05■□□□□ 0.64
SHOC2-205ENST00000489390 ZIC5Q96T25 663 aa19.05■□□□□ 0.64
SHOC2-205ENST00000489390 SAGE1Q9NXZ1 904 aa19.05■□□□□ 0.64
SHOC2-205ENST00000489390 TMX4Q9H1E5 349 aaPredicted RBP19.04■□□□□ 0.64
SHOC2-205ENST00000489390 TCERG1O14776 1098 aaKnown RBP19.03■□□□□ 0.64
SHOC2-205ENST00000489390 HUNKP57058 714 aa19.03■□□□□ 0.64
SHOC2-205ENST00000489390 SLC51AQ86UW1 340 aa19.03■□□□□ 0.64
SHOC2-205ENST00000489390 SUPT20HQ8NEM7 779 aa19.03■□□□□ 0.64
SHOC2-205ENST00000489390 PER1O15534 1290 aaPredicted RBP19.02■□□□□ 0.64
SHOC2-205ENST00000489390 HIRAP54198 1017 aaPredicted RBP19.02■□□□□ 0.64
SHOC2-205ENST00000489390 CC2D1BQ5T0F9 858 aaKnown RBP19.02■□□□□ 0.64
SHOC2-205ENST00000489390 ATP6V0A2Q9Y487 856 aa19.02■□□□□ 0.64
SHOC2-205ENST00000489390 MAP3K15Q6ZN16 1313 aa19.01■□□□□ 0.63
SHOC2-205ENST00000489390 PRKAR2BP31323 418 aa19.01■□□□□ 0.63
SHOC2-205ENST00000489390 RTF1Q92541 710 aaKnown RBP19.01■□□□□ 0.63
SHOC2-205ENST00000489390 BCL2L13Q9BXK5 485 aa19.01■□□□□ 0.63
SHOC2-205ENST00000489390 RTFDC1Q9BY42 306 aaPredicted RBP19.01■□□□□ 0.63
SHOC2-205ENST00000489390 TNIP1Q15025 636 aa19■□□□□ 0.63
SHOC2-205ENST00000489390 RGMBQ6NW40 437 aa19■□□□□ 0.63
SHOC2-205ENST00000489390 MCM10Q7L590 875 aa19■□□□□ 0.63
SHOC2-205ENST00000489390 RSPH6AQ9H0K4 717 aa19■□□□□ 0.63
SHOC2-205ENST00000489390 POLR2AP24928 1970 aaKnown RBP19■□□□□ 0.63
SHOC2-205ENST00000489390 UBN2Q6ZU65 1347 aa19■□□□□ 0.63
SHOC2-205ENST00000489390 CLSPNQ9HAW4 1339 aa19■□□□□ 0.63
SHOC2-205ENST00000489390 FAM155AB1AL88 458 aaPredicted RBP18.99■□□□□ 0.63
SHOC2-205ENST00000489390 SUSD4Q5VX71 490 aa18.99■□□□□ 0.63
SHOC2-205ENST00000489390 KIF6Q6ZMV9 814 aa18.99■□□□□ 0.63
SHOC2-205ENST00000489390 TRPM4Q8TD43 1214 aa18.99■□□□□ 0.63
SHOC2-205ENST00000489390 GPTP24298 496 aa18.98■□□□□ 0.63
SHOC2-205ENST00000489390 USP48Q86UV5 1035 aa18.98■□□□□ 0.63
SHOC2-205ENST00000489390 NGEFQ8N5V2 710 aa18.98■□□□□ 0.63
SHOC2-205ENST00000489390 CCDC102AQ96A19 550 aa18.98■□□□□ 0.63
SHOC2-205ENST00000489390 CNOT7Q9UIV1 285 aaKnown RBP18.98■□□□□ 0.63
SHOC2-205ENST00000489390 H7C1D1 291 aa18.97■□□□□ 0.63
SHOC2-205ENST00000489390 NTSR2O95665 410 aa18.97■□□□□ 0.63
SHOC2-205ENST00000489390 KIAA2012Q0VF49 1180 aa18.97■□□□□ 0.63
SHOC2-205ENST00000489390 C3orf67Q6ZVT6 689 aa18.97■□□□□ 0.63
SHOC2-205ENST00000489390 ZNF34Q8IZ26 560 aa18.97■□□□□ 0.63
SHOC2-205ENST00000489390 NLRP3Q96P20 1036 aa18.97■□□□□ 0.63
SHOC2-205ENST00000489390 RNF186Q9NXI6 227 aa18.97■□□□□ 0.63
SHOC2-205ENST00000489390 LAMB2P55268 1798 aa18.96■□□□□ 0.63
SHOC2-205ENST00000489390 ANKRD36CQ5JPF3 1778 aa18.96■□□□□ 0.63
SHOC2-205ENST00000489390 HTATSF1O43719 755 aaKnown RBP18.96■□□□□ 0.63
SHOC2-205ENST00000489390 TRPA1O75762 1119 aa18.96■□□□□ 0.63
SHOC2-205ENST00000489390 RAD17O75943 681 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms