RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 PLEKHO1Q53GL0 409 aaPredicted RBP10.57□□□□□ -0.72
VTI1A-207ENST00000489357 NPM2Q86SE8 214 aaKnown RBP10.57□□□□□ -0.72
VTI1A-207ENST00000489357 TSPYL4Q9UJ04 414 aa10.57□□□□□ -0.72
VTI1A-207ENST00000489357 DOT1LQ8TEK3 1739 aa10.57□□□□□ -0.72
VTI1A-207ENST00000489357 APBA3O96018 575 aa10.56□□□□□ -0.72
VTI1A-207ENST00000489357 CCT4P50991 539 aaKnown RBP10.56□□□□□ -0.72
VTI1A-207ENST00000489357 DCTN1Q14203 1278 aa10.56□□□□□ -0.72
VTI1A-207ENST00000489357 EZH2Q15910 746 aaKnown RBP10.56□□□□□ -0.72
VTI1A-207ENST00000489357 CCDC30Q5VVM6 783 aa10.56□□□□□ -0.72
VTI1A-207ENST00000489357 MCM10Q7L590 875 aa10.56□□□□□ -0.72
VTI1A-207ENST00000489357 CHD1LQ86WJ1 897 aa10.56□□□□□ -0.72
VTI1A-207ENST00000489357 IFNL2Q8IZJ0 200 aa10.56□□□□□ -0.72
VTI1A-207ENST00000489357 KHSRPQ92945 711 aaKnown RBP eCLIP10.56□□□□□ -0.72
VTI1A-207ENST00000489357 RREB1Q92766 1687 aa10.56□□□□□ -0.72
VTI1A-207ENST00000489357 BECN1Q14457 450 aa10.55□□□□□ -0.72
VTI1A-207ENST00000489357 TAF7Q15545 349 aaPredicted RBP10.55□□□□□ -0.72
VTI1A-207ENST00000489357 BMP2KLQ5H9B9 411 aa10.55□□□□□ -0.72
VTI1A-207ENST00000489357 STK31Q9BXU1 1019 aa10.55□□□□□ -0.72
VTI1A-207ENST00000489357 ANO8Q9HCE9 1232 aaPredicted RBP10.55□□□□□ -0.72
VTI1A-207ENST00000489357 LY75O60449 1722 aa10.55□□□□□ -0.72
VTI1A-207ENST00000489357 KDM3BQ7LBC6 1761 aa10.54□□□□□ -0.72
VTI1A-207ENST00000489357 TESPA1A2RU30 521 aaPredicted RBP10.54□□□□□ -0.72
VTI1A-207ENST00000489357 NUDT7P0C024 238 aa10.54□□□□□ -0.72
VTI1A-207ENST00000489357 PRIM1P49642 420 aaKnown RBP10.54□□□□□ -0.72
VTI1A-207ENST00000489357 SKAP1Q86WV1 359 aa10.54□□□□□ -0.72
VTI1A-207ENST00000489357 TBC1D32Q96NH3 1257 aa10.54□□□□□ -0.72
VTI1A-207ENST00000489357 KDM6AO15550 1401 aaPredicted RBP10.53□□□□□ -0.72
VTI1A-207ENST00000489357 ATP10DQ9P241 1426 aa10.53□□□□□ -0.72
VTI1A-207ENST00000489357 ERVV-2B6SEH9 535 aa10.53□□□□□ -0.72
VTI1A-207ENST00000489357 ELL2O00472 640 aaPredicted RBP10.53□□□□□ -0.72
VTI1A-207ENST00000489357 HMMRO75330 724 aa10.53□□□□□ -0.72
VTI1A-207ENST00000489357 HOXB1P14653 301 aaPredicted RBP10.53□□□□□ -0.72
VTI1A-207ENST00000489357 AKAP4Q5JQC9 854 aa10.53□□□□□ -0.72
VTI1A-207ENST00000489357 ANKRD44Q8N8A2 993 aa10.53□□□□□ -0.72
VTI1A-207ENST00000489357 ACSBG1Q96GR2 724 aa10.53□□□□□ -0.72
VTI1A-207ENST00000489357 DCAF5Q96JK2 942 aa10.53□□□□□ -0.72
VTI1A-207ENST00000489357 NUP188Q5SRE5 1749 aa10.53□□□□□ -0.72
VTI1A-207ENST00000489357 SIPA1L3O60292 1781 aaPredicted RBP10.52□□□□□ -0.72
VTI1A-207ENST00000489357 HSP90AB1P08238 724 aaKnown RBP10.52□□□□□ -0.73
VTI1A-207ENST00000489357 PTGER2P43116 358 aa10.52□□□□□ -0.73
VTI1A-207ENST00000489357 SMYD5Q6GMV2 418 aa10.52□□□□□ -0.73
VTI1A-207ENST00000489357 ZNF530Q6P9A1 599 aaPredicted RBP10.52□□□□□ -0.73
VTI1A-207ENST00000489357 DCTPP1Q9H773 170 aa10.52□□□□□ -0.73
VTI1A-207ENST00000489357 IBTKQ9P2D0 1353 aaPredicted RBP10.52□□□□□ -0.73
VTI1A-207ENST00000489357 PSDA5PKW4 1024 aaPredicted RBP10.51□□□□□ -0.73
VTI1A-207ENST00000489357 GNAI3P08754 354 aa10.51□□□□□ -0.73
VTI1A-207ENST00000489357 HMGB2P26583 209 aaKnown RBP10.51□□□□□ -0.73
VTI1A-207ENST00000489357 MLLT3P42568 568 aaPredicted RBP10.51□□□□□ -0.73
VTI1A-207ENST00000489357 PIGBQ92521 554 aa10.51□□□□□ -0.73
VTI1A-207ENST00000489357 TAF1LQ8IZX4 1826 aa10.51□□□□□ -0.73
VTI1A-207ENST00000489357 ZNF831Q5JPB2 1677 aa10.5□□□□□ -0.73
VTI1A-207ENST00000489357 MRC1P22897 1456 aa10.5□□□□□ -0.73
VTI1A-207ENST00000489357 TULP1O00294 542 aaPredicted RBP10.5□□□□□ -0.73
VTI1A-207ENST00000489357 ST18O60284 1047 aa10.5□□□□□ -0.73
VTI1A-207ENST00000489357 RTL5Q5HYW3 569 aaPredicted RBP10.5□□□□□ -0.73
VTI1A-207ENST00000489357 IL17REQ8NFR9 667 aa10.5□□□□□ -0.73
VTI1A-207ENST00000489357 FAM163AQ96GL9 167 aaPredicted RBP10.5□□□□□ -0.73
VTI1A-207ENST00000489357 LGR6Q9HBX8 967 aa10.5□□□□□ -0.73
VTI1A-207ENST00000489357 PAPPAQ13219 1627 aa10.49□□□□□ -0.73
VTI1A-207ENST00000489357 RNMTO43148 476 aaKnown RBP10.49□□□□□ -0.73
VTI1A-207ENST00000489357 TXNRD1Q16881 649 aa10.49□□□□□ -0.73
VTI1A-207ENST00000489357 SIRT2Q8IXJ6 389 aa10.49□□□□□ -0.73
VTI1A-207ENST00000489357 DDX12PQ92771 950 aa10.49□□□□□ -0.73
VTI1A-207ENST00000489357 HDAC5Q9UQL6 1122 aa10.49□□□□□ -0.73
VTI1A-207ENST00000489357 GRXCR2A6NFK2 248 aa10.48□□□□□ -0.73
VTI1A-207ENST00000489357 RBM25P49756 843 aaKnown RBP10.48□□□□□ -0.73
VTI1A-207ENST00000489357 FLIIQ13045 1269 aa10.48□□□□□ -0.73
VTI1A-207ENST00000489357 R3HDM1Q15032 1099 aaKnown RBP10.48□□□□□ -0.73
VTI1A-207ENST00000489357 C1orf141Q5JVX7 400 aa10.48□□□□□ -0.73
VTI1A-207ENST00000489357 ANKRD45Q5TZF3 282 aa10.48□□□□□ -0.73
VTI1A-207ENST00000489357 CEP85Q6P2H3 762 aa10.48□□□□□ -0.73
VTI1A-207ENST00000489357 MPRIPQ6WCQ1 1025 aa10.48□□□□□ -0.73
VTI1A-207ENST00000489357 IL27Q8NEV9 243 aa10.48□□□□□ -0.73
VTI1A-207ENST00000489357 ATG3Q9NT62 314 aa10.48□□□□□ -0.73
VTI1A-207ENST00000489357 LRRC4BQ9NT99 713 aa10.48□□□□□ -0.73
VTI1A-207ENST00000489357 GNAI2P04899 355 aa10.47□□□□□ -0.73
VTI1A-207ENST00000489357 TEFQ10587 303 aa10.47□□□□□ -0.73
VTI1A-207ENST00000489357 KRT24Q2M2I5 525 aa10.47□□□□□ -0.73
VTI1A-207ENST00000489357 SLC27A3Q5K4L6 730 aa10.47□□□□□ -0.73
VTI1A-207ENST00000489357 NFATC2IPQ8NCF5 419 aa10.47□□□□□ -0.73
VTI1A-207ENST00000489357 LNPKQ9C0E8 428 aa10.47□□□□□ -0.73
VTI1A-207ENST00000489357 SLC52A2Q9HAB3 445 aa10.47□□□□□ -0.73
VTI1A-207ENST00000489357 LHX6Q9UPM6 363 aa10.47□□□□□ -0.73
VTI1A-207ENST00000489357 CICQ96RK0 1608 aaPredicted RBP10.47□□□□□ -0.73
VTI1A-207ENST00000489357 UBR2Q8IWV8 1755 aa10.47□□□□□ -0.73
VTI1A-207ENST00000489357 SMARCC1Q92922 1105 aaPredicted RBP10.46□□□□□ -0.73
VTI1A-207ENST00000489357 C22orf23Q9BZE7 217 aa10.46□□□□□ -0.73
VTI1A-207ENST00000489357 OSBPL3Q9H4L5 887 aa10.46□□□□□ -0.73
VTI1A-207ENST00000489357 TMOD3Q9NYL9 352 aa10.46□□□□□ -0.73
VTI1A-207ENST00000489357 ASAP1Q9ULH1 1129 aa10.46□□□□□ -0.73
VTI1A-207ENST00000489357 HEG1Q9ULI3 1381 aa10.46□□□□□ -0.74
VTI1A-207ENST00000489357 QSER1Q2KHR3 1735 aa10.46□□□□□ -0.74
VTI1A-207ENST00000489357 MYH14Q7Z406 1995 aaKnown RBP10.46□□□□□ -0.74
VTI1A-207ENST00000489357 CDC45O75419 566 aa10.45□□□□□ -0.74
VTI1A-207ENST00000489357 PHF14O94880 888 aa10.45□□□□□ -0.74
VTI1A-207ENST00000489357 EIF4A1P60842 406 aaKnown RBP10.45□□□□□ -0.74
VTI1A-207ENST00000489357 FKBP5Q13451 457 aaPredicted RBP10.45□□□□□ -0.74
VTI1A-207ENST00000489357 HDGFL1Q5TGJ6 251 aa10.45□□□□□ -0.74
VTI1A-207ENST00000489357 SYTL4Q96C24 671 aaPredicted RBP10.45□□□□□ -0.74
VTI1A-207ENST00000489357 SLC4A9Q96Q91 983 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms