RNA–Protein interactions for RNA: ENST00000489169.1

CACUL1-204, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 2

Gene CACUL1, Length 517 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-204ENST00000489169 USP32Q8NFA0 1604 aa9.96□□□□□ -0.82
CACUL1-204ENST00000489169 XRN1Q8IZH2 1706 aaKnown RBP9.96□□□□□ -0.82
CACUL1-204ENST00000489169 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.95□□□□□ -0.82
CACUL1-204ENST00000489169 WIPF1O43516 503 aa9.95□□□□□ -0.82
CACUL1-204ENST00000489169 LCE2CQ5TA81 110 aa9.95□□□□□ -0.82
CACUL1-204ENST00000489169 LYPD8Q6UX82 237 aa9.95□□□□□ -0.82
CACUL1-204ENST00000489169 ZNF511Q8NB15 262 aa9.95□□□□□ -0.82
CACUL1-204ENST00000489169 BAP1Q92560 729 aa9.95□□□□□ -0.82
CACUL1-204ENST00000489169 TERF2IPQ9NYB0 399 aa9.95□□□□□ -0.82
CACUL1-204ENST00000489169 ATP7BP35670 1465 aa9.95□□□□□ -0.82
CACUL1-204ENST00000489169 ROBO2Q9HCK4 1378 aa9.94□□□□□ -0.82
CACUL1-204ENST00000489169 TERTO14746 1132 aaKnown RBP9.94□□□□□ -0.82
CACUL1-204ENST00000489169 CSB-PGBD3P0DP91 1061 aa9.94□□□□□ -0.82
CACUL1-204ENST00000489169 NLRP13Q86W25 1043 aa9.94□□□□□ -0.82
CACUL1-204ENST00000489169 PTPRUQ92729 1446 aa9.93□□□□□ -0.82
CACUL1-204ENST00000489169 CGNL1Q0VF96 1302 aa9.93□□□□□ -0.82
CACUL1-204ENST00000489169 WASLO00401 505 aaPredicted RBP9.93□□□□□ -0.82
CACUL1-204ENST00000489169 RFX1P22670 979 aa9.93□□□□□ -0.82
CACUL1-204ENST00000489169 VARSP26640 1264 aaKnown RBP9.93□□□□□ -0.82
CACUL1-204ENST00000489169 SOX11P35716 441 aa9.93□□□□□ -0.82
CACUL1-204ENST00000489169 LINC01559Q495D7 138 aa9.93□□□□□ -0.82
CACUL1-204ENST00000489169 HELBQ8NG08 1087 aaPredicted RBP9.93□□□□□ -0.82
CACUL1-204ENST00000489169 SLC26A8Q96RN1 970 aa9.93□□□□□ -0.82
CACUL1-204ENST00000489169 CDK19Q9BWU1 502 aa9.93□□□□□ -0.82
CACUL1-204ENST00000489169 AMOTL2Q9Y2J4 779 aa9.93□□□□□ -0.82
CACUL1-204ENST00000489169 WASF2Q9Y6W5 498 aa9.93□□□□□ -0.82
CACUL1-204ENST00000489169 INSRP06213 1382 aa9.92□□□□□ -0.82
CACUL1-204ENST00000489169 PALM3A6NDB9 673 aaPredicted RBP9.92□□□□□ -0.82
CACUL1-204ENST00000489169 CFAP99D6REC4 459 aa9.92□□□□□ -0.82
CACUL1-204ENST00000489169 VAC14Q08AM6 782 aa9.92□□□□□ -0.82
CACUL1-204ENST00000489169 SAFB2Q14151 953 aaKnown RBP eCLIP9.92□□□□□ -0.82
CACUL1-204ENST00000489169 TRIM46Q7Z4K8 759 aa9.92□□□□□ -0.82
CACUL1-204ENST00000489169 HDGFL2Q7Z4V5 671 aaPredicted RBP9.92□□□□□ -0.82
CACUL1-204ENST00000489169 WAPLQ7Z5K2 1190 aa9.92□□□□□ -0.82
CACUL1-204ENST00000489169 TMC1Q8TDI8 760 aa9.92□□□□□ -0.82
CACUL1-204ENST00000489169 CHD2O14647 1828 aaKnown RBP9.91□□□□□ -0.82
CACUL1-204ENST00000489169 PLEKHH1Q9ULM0 1364 aa9.91□□□□□ -0.82
CACUL1-204ENST00000489169 CAPN5O15484 640 aaPredicted RBP9.91□□□□□ -0.82
CACUL1-204ENST00000489169 LRRN4Q8WUT4 740 aa9.91□□□□□ -0.82
CACUL1-204ENST00000489169 MRS2Q9HD23 443 aa9.91□□□□□ -0.82
CACUL1-204ENST00000489169 NWD1Q149M9 1564 aa9.91□□□□□ -0.82
CACUL1-204ENST00000489169 ANKARQ7Z5J8 1434 aa9.9□□□□□ -0.82
CACUL1-204ENST00000489169 NSD3Q9BZ95 1437 aa9.9□□□□□ -0.82
CACUL1-204ENST00000489169 F12P00748 615 aaPredicted RBP9.9□□□□□ -0.82
CACUL1-204ENST00000489169 KCNA6P17658 529 aa9.9□□□□□ -0.82
CACUL1-204ENST00000489169 SLC12A5Q9H2X9 1139 aa9.9□□□□□ -0.82
CACUL1-204ENST00000489169 TLL2Q9Y6L7 1015 aa9.9□□□□□ -0.82
CACUL1-204ENST00000489169 NKTRP30414 1462 aaKnown RBP9.9□□□□□ -0.83
CACUL1-204ENST00000489169 ATG7O95352 703 aa9.89□□□□□ -0.83
CACUL1-204ENST00000489169 BMP1P13497 986 aa9.89□□□□□ -0.83
CACUL1-204ENST00000489169 CARD14Q9BXL6 1004 aa9.89□□□□□ -0.83
CACUL1-204ENST00000489169 NCOA3Q9Y6Q9 1424 aa9.89□□□□□ -0.83
CACUL1-204ENST00000489169 A0A1W2PP64 1363 aa9.88□□□□□ -0.83
CACUL1-204ENST00000489169 CDC42BPGQ6DT37 1551 aa9.88□□□□□ -0.83
CACUL1-204ENST00000489169 NUDT16Q96DE0 195 aaKnown RBP9.88□□□□□ -0.83
CACUL1-204ENST00000489169 UCN2Q96RP3 112 aa9.88□□□□□ -0.83
CACUL1-204ENST00000489169 TFIP11Q9UBB9 837 aaKnown RBP9.88□□□□□ -0.83
CACUL1-204ENST00000489169 CPSF1Q10570 1443 aaKnown RBP9.88□□□□□ -0.83
CACUL1-204ENST00000489169 EDC4Q6P2E9 1401 aaKnown RBP9.88□□□□□ -0.83
CACUL1-204ENST00000489169 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.87□□□□□ -0.83
CACUL1-204ENST00000489169 NHSL1Q5SYE7 1610 aa9.87□□□□□ -0.83
CACUL1-204ENST00000489169 LMOD1P29536 600 aaPredicted RBP9.87□□□□□ -0.83
CACUL1-204ENST00000489169 CC2D1BQ5T0F9 858 aaKnown RBP9.87□□□□□ -0.83
CACUL1-204ENST00000489169 PPIP5K1Q6PFW1 1433 aa9.87□□□□□ -0.83
CACUL1-204ENST00000489169 ADGRL3Q9HAR2 1447 aa9.87□□□□□ -0.83
CACUL1-204ENST00000489169 ITSN1Q15811 1721 aa9.87□□□□□ -0.83
CACUL1-204ENST00000489169 TOPAZ1Q8N9V7 1692 aa9.87□□□□□ -0.83
CACUL1-204ENST00000489169 CD163L1Q9NR16 1453 aa9.86□□□□□ -0.83
CACUL1-204ENST00000489169 NNTQ13423 1086 aa9.86□□□□□ -0.83
CACUL1-204ENST00000489169 ZNF784Q8NCA9 323 aaPredicted RBP9.86□□□□□ -0.83
CACUL1-204ENST00000489169 EPS8L1Q8TE68 723 aa9.86□□□□□ -0.83
CACUL1-204ENST00000489169 MAP10Q9P2G4 905 aa9.86□□□□□ -0.83
CACUL1-204ENST00000489169 RGS12O14924 1447 aa9.85□□□□□ -0.83
CACUL1-204ENST00000489169 PPP2R1AP30153 589 aa9.85□□□□□ -0.83
CACUL1-204ENST00000489169 CTHP32929 405 aa9.85□□□□□ -0.83
CACUL1-204ENST00000489169 INSM1Q01101 510 aaPredicted RBP9.85□□□□□ -0.83
CACUL1-204ENST00000489169 MEX3CQ5U5Q3 659 aaKnown RBP9.85□□□□□ -0.83
CACUL1-204ENST00000489169 PNISRQ8TF01 805 aaKnown RBP9.85□□□□□ -0.83
CACUL1-204ENST00000489169 CDK15Q96Q40 435 aa9.85□□□□□ -0.83
CACUL1-204ENST00000489169 KLF16Q9BXK1 252 aaPredicted RBP9.85□□□□□ -0.83
CACUL1-204ENST00000489169 VRTNQ9H8Y1 702 aa9.85□□□□□ -0.83
CACUL1-204ENST00000489169 CABP1Q9NZU7 370 aa9.85□□□□□ -0.83
CACUL1-204ENST00000489169 NXF1Q9UBU9 619 aaKnown RBP9.85□□□□□ -0.83
CACUL1-204ENST00000489169 STK17AQ9UEE5 414 aa9.85□□□□□ -0.83
CACUL1-204ENST00000489169 DCCP43146 1447 aa9.84□□□□□ -0.83
CACUL1-204ENST00000489169 TMEM88BA6NKF7 163 aa9.84□□□□□ -0.83
CACUL1-204ENST00000489169 FOXD4L5Q5VV16 416 aaPredicted RBP9.84□□□□□ -0.83
CACUL1-204ENST00000489169 MORC1Q86VD1 984 aa9.84□□□□□ -0.83
CACUL1-204ENST00000489169 NPAS3Q8IXF0 933 aa9.84□□□□□ -0.83
CACUL1-204ENST00000489169 FAM174AQ8TBP5 190 aa9.84□□□□□ -0.83
CACUL1-204ENST00000489169 FOXD4L4Q8WXT5 416 aaPredicted RBP9.84□□□□□ -0.83
CACUL1-204ENST00000489169 MAFBQ9Y5Q3 323 aaPredicted RBP9.84□□□□□ -0.83
CACUL1-204ENST00000489169 ANKRD26Q9UPS8 1709 aa9.84□□□□□ -0.83
CACUL1-204ENST00000489169 MON2Q7Z3U7 1717 aa9.83□□□□□ -0.84
CACUL1-204ENST00000489169 FMN2Q9NZ56 1722 aa9.83□□□□□ -0.84
CACUL1-204ENST00000489169 ADH1CP00326 375 aa9.83□□□□□ -0.84
CACUL1-204ENST00000489169 NEFLP07196 543 aa9.83□□□□□ -0.84
CACUL1-204ENST00000489169 TIMP2P16035 220 aa9.83□□□□□ -0.84
CACUL1-204ENST00000489169 POLR3AO14802 1390 aaPredicted RBP9.83□□□□□ -0.84
CACUL1-204ENST00000489169 AKAP12Q02952 1782 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms