RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 RGL2O15211 777 aa21.7■■□□□ 1.06
USP48-210ENST00000489108 RGS19P49795 217 aa21.7■■□□□ 1.06
USP48-210ENST00000489108 SCNN1DP51172 638 aa21.7■■□□□ 1.06
USP48-210ENST00000489108 TRAF5O00463 557 aa21.69■■□□□ 1.06
USP48-210ENST00000489108 MCM10Q7L590 875 aa21.69■■□□□ 1.06
USP48-210ENST00000489108 TSKSQ9UJT2 592 aa21.69■■□□□ 1.06
USP48-210ENST00000489108 CRY2Q49AN0 593 aa21.68■■□□□ 1.06
USP48-210ENST00000489108 CC2D2BQ6DHV5 1058 aa21.68■■□□□ 1.06
USP48-210ENST00000489108 NUTM1Q86Y26 1132 aa21.68■■□□□ 1.06
USP48-210ENST00000489108 RSPH6AQ9H0K4 717 aa21.68■■□□□ 1.06
USP48-210ENST00000489108 TRPM7Q96QT4 1865 aa21.68■■□□□ 1.06
USP48-210ENST00000489108 AOC2O75106 756 aa21.67■■□□□ 1.06
USP48-210ENST00000489108 LARGE2Q8N3Y3 721 aa21.67■■□□□ 1.06
USP48-210ENST00000489108 THSD7BQ9C0I4 1608 aa21.66■■□□□ 1.06
USP48-210ENST00000489108 ABCC12Q96J65 1359 aa21.66■■□□□ 1.06
USP48-210ENST00000489108 USP50Q70EL3 339 aaPredicted RBP21.66■■□□□ 1.06
USP48-210ENST00000489108 RTF1Q92541 710 aaKnown RBP21.66■■□□□ 1.06
USP48-210ENST00000489108 TLL2Q9Y6L7 1015 aa21.66■■□□□ 1.06
USP48-210ENST00000489108 DCTN1Q14203 1278 aa21.65■■□□□ 1.06
USP48-210ENST00000489108 SLC51AQ86UW1 340 aa21.65■■□□□ 1.06
USP48-210ENST00000489108 NGEFQ8N5V2 710 aa21.65■■□□□ 1.06
USP48-210ENST00000489108 NYXQ9GZU5 481 aa21.65■■□□□ 1.06
USP48-210ENST00000489108 TCERG1O14776 1098 aaKnown RBP21.64■■□□□ 1.05
USP48-210ENST00000489108 MAP2K2P36507 400 aa21.64■■□□□ 1.05
USP48-210ENST00000489108 RPGRQ92834 1020 aaKnown RBP21.64■■□□□ 1.05
USP48-210ENST00000489108 HOXA10P31260 410 aaPredicted RBP21.63■■□□□ 1.05
USP48-210ENST00000489108 GRIPAP1Q4V328 841 aa21.62■■□□□ 1.05
USP48-210ENST00000489108 MIS18AQ9NYP9 233 aa21.62■■□□□ 1.05
USP48-210ENST00000489108 NUP98P52948 1817 aa21.62■■□□□ 1.05
USP48-210ENST00000489108 NPC1L1Q9UHC9 1359 aa21.61■■□□□ 1.05
USP48-210ENST00000489108 CASP8AP2Q9UKL3 1982 aa21.61■■□□□ 1.05
USP48-210ENST00000489108 NIM1KQ8IY84 436 aa21.61■■□□□ 1.05
USP48-210ENST00000489108 CFAP44Q96MT7 982 aa21.61■■□□□ 1.05
USP48-210ENST00000489108 ERVV-1B6SEH8 477 aa21.6■■□□□ 1.05
USP48-210ENST00000489108 GPTP24298 496 aa21.6■■□□□ 1.05
USP48-210ENST00000489108 TAF7Q15545 349 aaPredicted RBP21.6■■□□□ 1.05
USP48-210ENST00000489108 SAPCD2Q86UD0 394 aa21.6■■□□□ 1.05
USP48-210ENST00000489108 RBM17Q96I25 401 aaKnown RBP21.6■■□□□ 1.05
USP48-210ENST00000489108 CRAMP1Q96RY5 1269 aa21.6■■□□□ 1.05
USP48-210ENST00000489108 MCOLN1Q9GZU1 580 aa21.6■■□□□ 1.05
USP48-210ENST00000489108 ADARB2Q9NS39 739 aaKnown RBP21.6■■□□□ 1.05
USP48-210ENST00000489108 PPEF1O14829 653 aaPredicted RBP21.59■■□□□ 1.05
USP48-210ENST00000489108 PPIP5K2O43314 1243 aa21.59■■□□□ 1.05
USP48-210ENST00000489108 CELF2O95319 508 aaKnown RBP21.59■■□□□ 1.05
USP48-210ENST00000489108 SUSD4Q5VX71 490 aa21.59■■□□□ 1.05
USP48-210ENST00000489108 TTLL7Q6ZT98 887 aa21.59■■□□□ 1.05
USP48-210ENST00000489108 CFAP53Q96M91 514 aa21.59■■□□□ 1.05
USP48-210ENST00000489108 GPRC5DQ9NZD1 345 aa21.59■■□□□ 1.05
USP48-210ENST00000489108 MAP3K15Q6ZN16 1313 aa21.58■■□□□ 1.05
USP48-210ENST00000489108 U2AF1L5P0DN76 240 aaPredicted RBP21.58■■□□□ 1.05
USP48-210ENST00000489108 U2AF1Q01081 240 aaKnown RBP eCLIP21.58■■□□□ 1.053e-7■■■□□ 15.3
USP48-210ENST00000489108 AOC3Q16853 763 aa21.58■■□□□ 1.05
USP48-210ENST00000489108 NUDCQ9Y266 331 aa21.58■■□□□ 1.05
USP48-210ENST00000489108 RRP7AQ9Y3A4 280 aaKnown RBP21.58■■□□□ 1.05
USP48-210ENST00000489108 HTATSF1O43719 755 aaKnown RBP21.57■■□□□ 1.04
USP48-210ENST00000489108 CXCL9Q07325 125 aa21.57■■□□□ 1.04
USP48-210ENST00000489108 C3orf67Q6ZVT6 689 aa21.57■■□□□ 1.04
USP48-210ENST00000489108 GLIS2Q9BZE0 524 aaPredicted RBP21.57■■□□□ 1.04
USP48-210ENST00000489108 UBN2Q6ZU65 1347 aa21.56■■□□□ 1.04
USP48-210ENST00000489108 CA12O43570 354 aa21.56■■□□□ 1.04
USP48-210ENST00000489108 PCDH10Q9P2E7 1040 aa21.56■■□□□ 1.04
USP48-210ENST00000489108 RIC1Q4ADV7 1423 aa21.55■■□□□ 1.04
USP48-210ENST00000489108 KIF6Q6ZMV9 814 aa21.55■■□□□ 1.04
USP48-210ENST00000489108 ZBTB3Q9H5J0 574 aa21.55■■□□□ 1.04
USP48-210ENST00000489108 MYL6BP14649 208 aa21.54■■□□□ 1.04
USP48-210ENST00000489108 GMPSP49915 693 aaPredicted RBP21.54■■□□□ 1.04
USP48-210ENST00000489108 BRPF1P55201 1214 aaPredicted RBP21.54■■□□□ 1.04
USP48-210ENST00000489108 DGKZQ13574 1117 aa21.54■■□□□ 1.04
USP48-210ENST00000489108 CIAPIN1Q6FI81 312 aa21.54■■□□□ 1.04
USP48-210ENST00000489108 ZNF34Q8IZ26 560 aa21.54■■□□□ 1.04
USP48-210ENST00000489108 HHIPL1Q96JK4 782 aa21.54■■□□□ 1.04
USP48-210ENST00000489108 PGAP2Q9UHJ9 254 aa21.54■■□□□ 1.04
USP48-210ENST00000489108 ZNRF3Q9ULT6 936 aa21.54■■□□□ 1.04
USP48-210ENST00000489108 LAMB4A4D0S4 1761 aa21.53■■□□□ 1.04
USP48-210ENST00000489108 NTSR2O95665 410 aa21.53■■□□□ 1.04
USP48-210ENST00000489108 TMX4Q9H1E5 349 aaPredicted RBP21.53■■□□□ 1.04
USP48-210ENST00000489108 VPS33BQ9H267 617 aa21.53■■□□□ 1.04
USP48-210ENST00000489108 ZNF408Q9H9D4 720 aa21.53■■□□□ 1.04
USP48-210ENST00000489108 ATP6V0A2Q9Y487 856 aa21.53■■□□□ 1.04
USP48-210ENST00000489108 IBTKQ9P2D0 1353 aaPredicted RBP21.52■■□□□ 1.04
USP48-210ENST00000489108 HIRAP54198 1017 aaPredicted RBP21.52■■□□□ 1.04
USP48-210ENST00000489108 NLRP3Q96P20 1036 aa21.51■■□□□ 1.03
USP48-210ENST00000489108 ZIC5Q96T25 663 aa21.51■■□□□ 1.03
USP48-210ENST00000489108 EIF4A1P60842 406 aaKnown RBP21.5■■□□□ 1.03
USP48-210ENST00000489108 CCER1Q8TC90 406 aaPredicted RBP21.5■■□□□ 1.03
USP48-210ENST00000489108 RTFDC1Q9BY42 306 aaPredicted RBP21.5■■□□□ 1.03
USP48-210ENST00000489108 RAD17O75943 681 aa21.49■■□□□ 1.03
USP48-210ENST00000489108 GIGYF2Q6Y7W6 1299 aaKnown RBP21.49■■□□□ 1.03
USP48-210ENST00000489108 CDC37L1Q7L3B6 337 aa21.49■■□□□ 1.03
USP48-210ENST00000489108 PPP1R42Q7Z4L9 355 aa21.49■■□□□ 1.03
USP48-210ENST00000489108 SUPT20HQ8NEM7 779 aa21.49■■□□□ 1.03
USP48-210ENST00000489108 ZC3H15Q8WU90 426 aaKnown RBP21.49■■□□□ 1.03
USP48-210ENST00000489108 BCL2L13Q9BXK5 485 aa21.49■■□□□ 1.03
USP48-210ENST00000489108 TNRC18O15417 2968 aaPredicted RBP21.49■■□□□ 1.03
USP48-210ENST00000489108 SLC10A5Q5PT55 438 aa21.48■■□□□ 1.03
USP48-210ENST00000489108 TRPM4Q8TD43 1214 aa21.48■■□□□ 1.03
USP48-210ENST00000489108 PNISRQ8TF01 805 aaKnown RBP21.48■■□□□ 1.03
USP48-210ENST00000489108 PPP2R1AP30153 589 aa21.47■■□□□ 1.03
USP48-210ENST00000489108 DLK2Q6UY11 383 aa21.47■■□□□ 1.03
USP48-210ENST00000489108 DPP8Q6V1X1 898 aaPredicted RBP21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 616.1 ms