RNA–Protein interactions for RNA: ENST00000488753.1

ATPAF2-207, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-207ENST00000488753 CRAMP1Q96RY5 1269 aa17.04■□□□□ 0.32
ATPAF2-207ENST00000488753 PSMD1Q99460 953 aa17.04■□□□□ 0.32
ATPAF2-207ENST00000488753 UTP14AQ9BVJ6 771 aaKnown RBP17.04■□□□□ 0.32
ATPAF2-207ENST00000488753 LAS1LQ9Y4W2 734 aaKnown RBP17.04■□□□□ 0.32
ATPAF2-207ENST00000488753 SNED1Q8TER0 1413 aa17.04■□□□□ 0.32
ATPAF2-207ENST00000488753 DICER1Q9UPY3 1922 aaKnown RBP17.04■□□□□ 0.32
ATPAF2-207ENST00000488753 ANXA1P04083 346 aa17.03■□□□□ 0.32
ATPAF2-207ENST00000488753 XAGE3Q8WTP9 111 aa17.03■□□□□ 0.32
ATPAF2-207ENST00000488753 RBM17Q96I25 401 aaKnown RBP17.03■□□□□ 0.32
ATPAF2-207ENST00000488753 L3MBTL3Q96JM7 780 aaPredicted RBP17.03■□□□□ 0.32
ATPAF2-207ENST00000488753 CCDC88AQ3V6T2 1871 aa17.03■□□□□ 0.32
ATPAF2-207ENST00000488753 IQCA1LA6NCM1 817 aa17.02■□□□□ 0.32
ATPAF2-207ENST00000488753 DDNO94850 711 aaPredicted RBP17.02■□□□□ 0.32
ATPAF2-207ENST00000488753 ZEB1P37275 1124 aaPredicted RBP17.02■□□□□ 0.32
ATPAF2-207ENST00000488753 CALD1Q05682 793 aaKnown RBP17.02■□□□□ 0.32
ATPAF2-207ENST00000488753 KRT24Q2M2I5 525 aa17.02■□□□□ 0.32
ATPAF2-207ENST00000488753 OLFM4Q6UX06 510 aa17.02■□□□□ 0.32
ATPAF2-207ENST00000488753 NLRP3Q96P20 1036 aa17.02■□□□□ 0.32
ATPAF2-207ENST00000488753 ZNF277Q9NRM2 450 aaPredicted RBP17.02■□□□□ 0.32
ATPAF2-207ENST00000488753 IARSP41252 1262 aaKnown RBP17.01■□□□□ 0.31
ATPAF2-207ENST00000488753 TCIRG1Q13488 830 aa17.01■□□□□ 0.31
ATPAF2-207ENST00000488753 HDGFL1Q5TGJ6 251 aa17.01■□□□□ 0.31
ATPAF2-207ENST00000488753 SYNE4Q8N205 404 aa17.01■□□□□ 0.31
ATPAF2-207ENST00000488753 NECTIN2Q92692 538 aa17.01■□□□□ 0.31
ATPAF2-207ENST00000488753 CHPF2Q9P2E5 772 aa17.01■□□□□ 0.31
ATPAF2-207ENST00000488753 DBF4Q9UBU7 674 aaPredicted RBP17.01■□□□□ 0.31
ATPAF2-207ENST00000488753 CACNA1SQ13698 1873 aa17.01■□□□□ 0.31
ATPAF2-207ENST00000488753 APAF1O14727 1248 aa17■□□□□ 0.31
ATPAF2-207ENST00000488753 ZNF853P0CG23 659 aa17■□□□□ 0.31
ATPAF2-207ENST00000488753 AIMP1Q12904 312 aaKnown RBP17■□□□□ 0.31
ATPAF2-207ENST00000488753 NLRP10Q86W26 655 aa17■□□□□ 0.31
ATPAF2-207ENST00000488753 FZD9O00144 591 aa16.99■□□□□ 0.31
ATPAF2-207ENST00000488753 PPEF1O14829 653 aaPredicted RBP16.99■□□□□ 0.31
ATPAF2-207ENST00000488753 PLBD2Q8NHP8 589 aa16.99■□□□□ 0.31
ATPAF2-207ENST00000488753 KLRG1Q96E93 195 aa16.99■□□□□ 0.31
ATPAF2-207ENST00000488753 MBIPQ9NS73 344 aa16.99■□□□□ 0.31
ATPAF2-207ENST00000488753 IFT57Q9NWB7 429 aa16.99■□□□□ 0.31
ATPAF2-207ENST00000488753 DUSP27Q5VZP5 1158 aa16.98■□□□□ 0.31
ATPAF2-207ENST00000488753 C3orf67Q6ZVT6 689 aa16.98■□□□□ 0.31
ATPAF2-207ENST00000488753 JDP2Q8WYK2 163 aa16.98■□□□□ 0.31
ATPAF2-207ENST00000488753 TMX4Q9H1E5 349 aaPredicted RBP16.98■□□□□ 0.31
ATPAF2-207ENST00000488753 HYPKQ9NX55 129 aa16.98■□□□□ 0.31
ATPAF2-207ENST00000488753 SH3TC1Q8TE82 1336 aa16.97■□□□□ 0.31
ATPAF2-207ENST00000488753 GNAI1P63096 354 aa16.97■□□□□ 0.31
ATPAF2-207ENST00000488753 CHADLQ6NUI6 762 aa16.97■□□□□ 0.31
ATPAF2-207ENST00000488753 ANKRD13DQ6ZTN6 518 aa16.97■□□□□ 0.31
ATPAF2-207ENST00000488753 JMYQ8N9B5 988 aa16.97■□□□□ 0.31
ATPAF2-207ENST00000488753 VPS33BQ9H267 617 aa16.97■□□□□ 0.31
ATPAF2-207ENST00000488753 TRMT112Q9UI30 125 aaKnown RBP16.97■□□□□ 0.31
ATPAF2-207ENST00000488753 ZNF541Q9H0D2 1346 aa16.96■□□□□ 0.31
ATPAF2-207ENST00000488753 BBOX1O75936 387 aa16.96■□□□□ 0.31
ATPAF2-207ENST00000488753 HTRA3P83110 453 aa16.96■□□□□ 0.31
ATPAF2-207ENST00000488753 GPC2Q8N158 579 aa16.96■□□□□ 0.31
ATPAF2-207ENST00000488753 CHMP4AQ9BY43 222 aa16.96■□□□□ 0.31
ATPAF2-207ENST00000488753 TAF1DQ9H5J8 278 aaPredicted RBP16.96■□□□□ 0.31
ATPAF2-207ENST00000488753 ATP6V0A2Q9Y487 856 aa16.96■□□□□ 0.31
ATPAF2-207ENST00000488753 LDHDQ86WU2 507 aa16.95■□□□□ 0.3
ATPAF2-207ENST00000488753 ABCC4O15439 1325 aa16.95■□□□□ 0.3
ATPAF2-207ENST00000488753 TRIM28Q13263 835 aaKnown RBP16.94■□□□□ 0.3
ATPAF2-207ENST00000488753 ISCA1Q9BUE6 129 aa16.94■□□□□ 0.3
ATPAF2-207ENST00000488753 HACL1Q9UJ83 578 aa16.94■□□□□ 0.3
ATPAF2-207ENST00000488753 ANKRD36CQ5JPF3 1778 aa16.93■□□□□ 0.3
ATPAF2-207ENST00000488753 HCLS1P14317 486 aaPredicted RBP16.93■□□□□ 0.3
ATPAF2-207ENST00000488753 EIF6P56537 245 aaKnown RBP16.93■□□□□ 0.3
ATPAF2-207ENST00000488753 DDX46Q7L014 1031 aaKnown RBP16.93■□□□□ 0.3
ATPAF2-207ENST00000488753 TMC4Q7Z404 712 aa16.93■□□□□ 0.3
ATPAF2-207ENST00000488753 PNMA8AQ86V59 439 aaPredicted RBP16.93■□□□□ 0.3
ATPAF2-207ENST00000488753 LARGE2Q8N3Y3 721 aa16.93■□□□□ 0.3
ATPAF2-207ENST00000488753 SUPT20HQ8NEM7 779 aa16.93■□□□□ 0.3
ATPAF2-207ENST00000488753 SCN4AP35499 1836 aa16.93■□□□□ 0.3
ATPAF2-207ENST00000488753 POTEIP0CG38 1075 aa16.92■□□□□ 0.3
ATPAF2-207ENST00000488753 POTEJP0CG39 1038 aa16.92■□□□□ 0.3
ATPAF2-207ENST00000488753 GRAPQ13588 217 aa16.92■□□□□ 0.3
ATPAF2-207ENST00000488753 SP8Q8IXZ3 490 aa16.92■□□□□ 0.3
ATPAF2-207ENST00000488753 GRAPLQ8TC17 118 aaPredicted RBP16.92■□□□□ 0.3
ATPAF2-207ENST00000488753 RTFDC1Q9BY42 306 aaPredicted RBP16.92■□□□□ 0.3
ATPAF2-207ENST00000488753 TCERG1O14776 1098 aaKnown RBP16.91■□□□□ 0.3
ATPAF2-207ENST00000488753 EPHX2P34913 555 aa16.91■□□□□ 0.3
ATPAF2-207ENST00000488753 GOLGA2Q08379 1002 aa16.91■□□□□ 0.3
ATPAF2-207ENST00000488753 CCDC27Q2M243 656 aa16.91■□□□□ 0.3
ATPAF2-207ENST00000488753 CREBZFQ9NS37 354 aa16.91■□□□□ 0.3
ATPAF2-207ENST00000488753 SF3B3Q15393 1217 aaKnown RBP16.9■□□□□ 0.3
ATPAF2-207ENST00000488753 NCBP3Q53F19 620 aaKnown RBP16.9■□□□□ 0.3
ATPAF2-207ENST00000488753 NIM1KQ8IY84 436 aa16.9■□□□□ 0.3
ATPAF2-207ENST00000488753 COL4A5P29400 1685 aa16.9■□□□□ 0.3
ATPAF2-207ENST00000488753 ATP5J2-PTCD1G3V325 749 aa16.89■□□□□ 0.29
ATPAF2-207ENST00000488753 PPIP5K2O43314 1243 aa16.89■□□□□ 0.29
ATPAF2-207ENST00000488753 IFFO2Q5TF58 517 aa16.89■□□□□ 0.29
ATPAF2-207ENST00000488753 CCDC30Q5VVM6 783 aa16.89■□□□□ 0.29
ATPAF2-207ENST00000488753 DPP8Q6V1X1 898 aaPredicted RBP16.89■□□□□ 0.29
ATPAF2-207ENST00000488753 RIC3Q7Z5B4 369 aa16.89■□□□□ 0.29
ATPAF2-207ENST00000488753 PASKQ96RG2 1323 aa16.89■□□□□ 0.29
ATPAF2-207ENST00000488753 PCNTO95613 3336 aa16.88■□□□□ 0.29
ATPAF2-207ENST00000488753 ELL2O00472 640 aaPredicted RBP16.88■□□□□ 0.29
ATPAF2-207ENST00000488753 HSP90B1P14625 803 aaKnown RBP16.88■□□□□ 0.29
ATPAF2-207ENST00000488753 LMOD1P29536 600 aaPredicted RBP16.88■□□□□ 0.29
ATPAF2-207ENST00000488753 AOC3Q16853 763 aa16.88■□□□□ 0.29
ATPAF2-207ENST00000488753 CCDC184Q52MB2 194 aa16.88■□□□□ 0.29
ATPAF2-207ENST00000488753 EAPPQ56P03 285 aaPredicted RBP16.88■□□□□ 0.29
ATPAF2-207ENST00000488753 SLC51AQ86UW1 340 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 128.3 ms