RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 SOS1Q07889 1333 aaPredicted RBP16.9■□□□□ 0.3
RER1-207ENST00000488353 SRGAP3O43295 1099 aa16.9■□□□□ 0.3
RER1-207ENST00000488353 NBPF7P0C2Y1 421 aaPredicted RBP16.9■□□□□ 0.3
RER1-207ENST00000488353 CCDC192P0DO97 292 aa16.9■□□□□ 0.3
RER1-207ENST00000488353 PDE4CQ08493 712 aa16.9■□□□□ 0.3
RER1-207ENST00000488353 CHRNA2Q15822 529 aa16.9■□□□□ 0.3
RER1-207ENST00000488353 ALS2Q96Q42 1657 aa16.89■□□□□ 0.29
RER1-207ENST00000488353 STX6O43752 255 aa16.89■□□□□ 0.29
RER1-207ENST00000488353 RHPN1Q8TCX5 695 aa16.89■□□□□ 0.29
RER1-207ENST00000488353 PAXBP1Q9Y5B6 917 aa16.89■□□□□ 0.29
RER1-207ENST00000488353 MORC2Q9Y6X9 1032 aaPredicted RBP16.89■□□□□ 0.29
RER1-207ENST00000488353 LMO7Q8WWI1 1683 aa16.89■□□□□ 0.29
RER1-207ENST00000488353 NCAPD2Q15021 1401 aa16.89■□□□□ 0.29
RER1-207ENST00000488353 SLFN14P0C7P3 912 aa16.89■□□□□ 0.29
RER1-207ENST00000488353 FIBPO43427 364 aa16.88■□□□□ 0.29
RER1-207ENST00000488353 PRAMEF22A3QJZ6 481 aa16.88■□□□□ 0.29
RER1-207ENST00000488353 F13A1P00488 732 aa16.88■□□□□ 0.29
RER1-207ENST00000488353 CADPS2Q86UW7 1296 aa16.88■□□□□ 0.29
RER1-207ENST00000488353 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.88■□□□□ 0.29
RER1-207ENST00000488353 CCDC66A2RUB6 948 aa16.87■□□□□ 0.29
RER1-207ENST00000488353 PI4KAP2A4QPH2 592 aa16.87■□□□□ 0.29
RER1-207ENST00000488353 SYT1P21579 422 aa16.87■□□□□ 0.29
RER1-207ENST00000488353 PTGS1P23219 599 aa16.87■□□□□ 0.29
RER1-207ENST00000488353 PI4KAP1Q8N8J0 262 aa16.87■□□□□ 0.29
RER1-207ENST00000488353 KDM3BQ7LBC6 1761 aa16.87■□□□□ 0.29
RER1-207ENST00000488353 PI4K2BQ8TCG2 481 aa16.87■□□□□ 0.29
RER1-207ENST00000488353 FAM200AQ8TCP9 573 aa16.87■□□□□ 0.29
RER1-207ENST00000488353 NPHP3Q7Z494 1330 aa16.86■□□□□ 0.29
RER1-207ENST00000488353 HSPA4P34932 840 aa16.86■□□□□ 0.29
RER1-207ENST00000488353 CCDC112Q8NEF3 446 aa16.86■□□□□ 0.29
RER1-207ENST00000488353 DTNBO60941 627 aa16.86■□□□□ 0.29
RER1-207ENST00000488353 RAB11FIP3O75154 756 aa16.86■□□□□ 0.29
RER1-207ENST00000488353 CSB-PGBD3P0DP91 1061 aa16.86■□□□□ 0.29
RER1-207ENST00000488353 TNNT1P13805 278 aa16.86■□□□□ 0.29
RER1-207ENST00000488353 POLA2Q14181 598 aa16.86■□□□□ 0.29
RER1-207ENST00000488353 C16orf45Q96MC5 204 aaPredicted RBP16.86■□□□□ 0.29
RER1-207ENST00000488353 TERF2Q15554 542 aa16.85■□□□□ 0.29
RER1-207ENST00000488353 CWC27Q6UX04 472 aaKnown RBP16.85■□□□□ 0.29
RER1-207ENST00000488353 RAPGEF4Q8WZA2 1011 aa16.85■□□□□ 0.29
RER1-207ENST00000488353 SPG7Q9UQ90 795 aa16.85■□□□□ 0.29
RER1-207ENST00000488353 DCCP43146 1447 aa16.85■□□□□ 0.29
RER1-207ENST00000488353 OS9Q13438 667 aaPredicted RBP16.85■□□□□ 0.29
RER1-207ENST00000488353 KIF18AQ8NI77 898 aa16.85■□□□□ 0.29
RER1-207ENST00000488353 AOX1Q06278 1338 aa16.84■□□□□ 0.29
RER1-207ENST00000488353 PROSER3Q2NL68 480 aa16.84■□□□□ 0.29
RER1-207ENST00000488353 CCDC186Q7Z3E2 898 aa16.84■□□□□ 0.29
RER1-207ENST00000488353 DNAAF4Q8WXU2 420 aa16.84■□□□□ 0.29
RER1-207ENST00000488353 KIF1BPQ96EK5 621 aa16.84■□□□□ 0.29
RER1-207ENST00000488353 SMC3Q9UQE7 1217 aa16.84■□□□□ 0.29
RER1-207ENST00000488353 SNX14Q9Y5W7 946 aa16.84■□□□□ 0.29
RER1-207ENST00000488353 CAMTA1Q9Y6Y1 1673 aa16.84■□□□□ 0.29
RER1-207ENST00000488353 SGSM2O43147 1006 aa16.84■□□□□ 0.29
RER1-207ENST00000488353 HOXB7P09629 217 aa16.84■□□□□ 0.29
RER1-207ENST00000488353 CPA1P15085 419 aa16.84■□□□□ 0.29
RER1-207ENST00000488353 CDK11BP21127 795 aaKnown RBP16.84■□□□□ 0.29
RER1-207ENST00000488353 BEND3Q5T5X7 828 aa16.84■□□□□ 0.29
RER1-207ENST00000488353 RASEFQ8IZ41 740 aa16.84■□□□□ 0.29
RER1-207ENST00000488353 KRT222Q8N1A0 295 aa16.84■□□□□ 0.29
RER1-207ENST00000488353 PXDNLA1KZ92 1463 aa16.83■□□□□ 0.29
RER1-207ENST00000488353 SLC39A6Q13433 755 aa16.83■□□□□ 0.28
RER1-207ENST00000488353 LIMCH1Q9UPQ0 1083 aa16.83■□□□□ 0.28
RER1-207ENST00000488353 TNS3Q68CZ2 1445 aa16.83■□□□□ 0.28
RER1-207ENST00000488353 N4BP2Q86UW6 1770 aaPredicted RBP16.83■□□□□ 0.28
RER1-207ENST00000488353 GIGYF1O75420 1035 aaPredicted RBP16.82■□□□□ 0.28
RER1-207ENST00000488353 CNTROBQ8N137 903 aa16.82■□□□□ 0.28
RER1-207ENST00000488353 DNM1Q05193 864 aaKnown RBP16.82■□□□□ 0.28
RER1-207ENST00000488353 DRC7Q8IY82 874 aa16.82■□□□□ 0.28
RER1-207ENST00000488353 AK2P54819 239 aa16.81■□□□□ 0.28
RER1-207ENST00000488353 RAD50Q92878 1312 aa16.81■□□□□ 0.28
RER1-207ENST00000488353 TTC14Q96N46 770 aa16.81■□□□□ 0.28
RER1-207ENST00000488353 LSG1Q9H089 658 aaKnown RBP16.81■□□□□ 0.28
RER1-207ENST00000488353 MEGF6O75095 1541 aa16.81■□□□□ 0.28
RER1-207ENST00000488353 SPATA31A3Q5VYP0 1347 aa16.81■□□□□ 0.28
RER1-207ENST00000488353 LRMPQ12912 555 aa16.81■□□□□ 0.28
RER1-207ENST00000488353 MAP3K11Q16584 847 aa16.81■□□□□ 0.28
RER1-207ENST00000488353 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.81■□□□□ 0.28
RER1-207ENST00000488353 NAP1L2Q9ULW6 460 aaPredicted RBP16.81■□□□□ 0.28
RER1-207ENST00000488353 TATP17735 454 aaPredicted RBP16.8■□□□□ 0.28
RER1-207ENST00000488353 KCNJ4P48050 445 aa16.8■□□□□ 0.28
RER1-207ENST00000488353 FAM193AP78312 1265 aa16.8■□□□□ 0.28
RER1-207ENST00000488353 ZSCAN25Q6NSZ9 544 aa16.8■□□□□ 0.28
RER1-207ENST00000488353 BRINP3Q76B58 766 aa16.8■□□□□ 0.28
RER1-207ENST00000488353 DBF4Q9UBU7 674 aaPredicted RBP16.8■□□□□ 0.28
RER1-207ENST00000488353 ADCY9O60503 1353 aa16.8■□□□□ 0.28
RER1-207ENST00000488353 NAA30Q147X3 362 aaPredicted RBP16.8■□□□□ 0.28
RER1-207ENST00000488353 ZNF397Q8NF99 534 aaPredicted RBP16.8■□□□□ 0.28
RER1-207ENST00000488353 TIGD1Q96MW7 591 aa16.8■□□□□ 0.28
RER1-207ENST00000488353 TPD52L1Q16890 204 aaPredicted RBP16.79■□□□□ 0.28
RER1-207ENST00000488353 LUZP1Q86V48 1076 aa16.79■□□□□ 0.28
RER1-207ENST00000488353 NFATC2IPQ8NCF5 419 aa16.79■□□□□ 0.28
RER1-207ENST00000488353 DDX54Q8TDD1 881 aaKnown RBP16.79■□□□□ 0.28
RER1-207ENST00000488353 PA2G4Q9UQ80 394 aaKnown RBP16.79■□□□□ 0.28
RER1-207ENST00000488353 MRVI1Q9Y6F6 885 aa16.79■□□□□ 0.28
RER1-207ENST00000488353 PHKG2P15735 406 aa16.79■□□□□ 0.28
RER1-207ENST00000488353 TYRO3Q06418 890 aa16.79■□□□□ 0.28
RER1-207ENST00000488353 RUFY3Q7L099 469 aa16.79■□□□□ 0.28
RER1-207ENST00000488353 NUP62CLQ9H1M0 184 aa16.79■□□□□ 0.28
RER1-207ENST00000488353 KDM6AO15550 1401 aaPredicted RBP16.79■□□□□ 0.28
RER1-207ENST00000488353 ZBTB22O15209 634 aa16.78■□□□□ 0.28
RER1-207ENST00000488353 CASTP20810 708 aaKnown RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms