RNA–Protein interactions for RNA: ENST00000488128.6

COL16A1-214, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 2,854 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-214ENST00000488128 ARHGEF10O15013 1369 aa16.84■□□□□ 0.29
COL16A1-214ENST00000488128 NR1I2O75469 434 aa16.84■□□□□ 0.29
COL16A1-214ENST00000488128 KRT85P78386 507 aa16.84■□□□□ 0.29
COL16A1-214ENST00000488128 RIMS1Q86UR5 1692 aaKnown RBP16.83■□□□□ 0.29
COL16A1-214ENST00000488128 ZNF165P49910 485 aa16.83■□□□□ 0.29
COL16A1-214ENST00000488128 BICD2Q8TD16 824 aa16.83■□□□□ 0.29
COL16A1-214ENST00000488128 CYP46A1Q9Y6A2 500 aa16.83■□□□□ 0.29
COL16A1-214ENST00000488128 TAF6LQ9Y6J9 622 aa16.83■□□□□ 0.29
COL16A1-214ENST00000488128 CEP170BQ9Y4F5 1589 aaPredicted RBP16.83■□□□□ 0.28
COL16A1-214ENST00000488128 CCDC30Q5VVM6 783 aa16.83■□□□□ 0.28
COL16A1-214ENST00000488128 FILIP1Q7Z7B0 1213 aa16.83■□□□□ 0.28
COL16A1-214ENST00000488128 ERCC4Q92889 916 aaPredicted RBP16.83■□□□□ 0.28
COL16A1-214ENST00000488128 TPM3P06753 285 aa16.83■□□□□ 0.28
COL16A1-214ENST00000488128 ZNF75DP51815 510 aa16.83■□□□□ 0.28
COL16A1-214ENST00000488128 SPATA32Q96LK8 384 aa16.83■□□□□ 0.28
COL16A1-214ENST00000488128 IGSF1Q8N6C5 1336 aa16.82■□□□□ 0.28
COL16A1-214ENST00000488128 TOPAZ1Q8N9V7 1692 aa16.82■□□□□ 0.28
COL16A1-214ENST00000488128 RAB11FIP3O75154 756 aa16.82■□□□□ 0.28
COL16A1-214ENST00000488128 FGD1P98174 961 aa16.82■□□□□ 0.28
COL16A1-214ENST00000488128 SMTNL1A8MU46 457 aa16.82■□□□□ 0.28
COL16A1-214ENST00000488128 HOXC9P31274 260 aa16.82■□□□□ 0.28
COL16A1-214ENST00000488128 FEZ1Q99689 392 aa16.82■□□□□ 0.28
COL16A1-214ENST00000488128 ZNF215Q9UL58 517 aaPredicted RBP16.82■□□□□ 0.28
COL16A1-214ENST00000488128 LARP1Q6PKG0 1096 aaKnown RBP16.81■□□□□ 0.28
COL16A1-214ENST00000488128 FAM227BQ96M60 508 aa16.81■□□□□ 0.28
COL16A1-214ENST00000488128 TRERF1Q96PN7 1200 aa16.81■□□□□ 0.28
COL16A1-214ENST00000488128 PA2G4Q9UQ80 394 aaKnown RBP16.81■□□□□ 0.28
COL16A1-214ENST00000488128 CEP135Q66GS9 1140 aa16.81■□□□□ 0.28
COL16A1-214ENST00000488128 SSH3Q8TE77 659 aa16.81■□□□□ 0.28
COL16A1-214ENST00000488128 USP16Q9Y5T5 823 aa16.81■□□□□ 0.28
COL16A1-214ENST00000488128 DDX41Q9UJV9 622 aaKnown RBP16.8■□□□□ 0.28
COL16A1-214ENST00000488128 GNAT3A8MTJ3 354 aa16.79■□□□□ 0.28
COL16A1-214ENST00000488128 KMT5BQ4FZB7 885 aa16.79■□□□□ 0.28
COL16A1-214ENST00000488128 HDGFL1Q5TGJ6 251 aa16.79■□□□□ 0.28
COL16A1-214ENST00000488128 IL17REQ8NFR9 667 aa16.79■□□□□ 0.28
COL16A1-214ENST00000488128 DIP2AQ14689 1571 aa16.79■□□□□ 0.28
COL16A1-214ENST00000488128 KDRP35968 1356 aa16.79■□□□□ 0.28
COL16A1-214ENST00000488128 SLFN14P0C7P3 912 aa16.79■□□□□ 0.28
COL16A1-214ENST00000488128 GTF2E1P29083 439 aaPredicted RBP16.79■□□□□ 0.28
COL16A1-214ENST00000488128 TAF7Q15545 349 aaPredicted RBP16.79■□□□□ 0.28
COL16A1-214ENST00000488128 KIF18AQ8NI77 898 aa16.79■□□□□ 0.28
COL16A1-214ENST00000488128 KIF1BPQ96EK5 621 aa16.79■□□□□ 0.28
COL16A1-214ENST00000488128 ELF2Q15723 593 aa16.79■□□□□ 0.28
COL16A1-214ENST00000488128 VPS53Q5VIR6 699 aa16.79■□□□□ 0.28
COL16A1-214ENST00000488128 RBM8AQ9Y5S9 174 aaKnown RBP16.79■□□□□ 0.28
COL16A1-214ENST00000488128 IL17RAQ96F46 866 aa16.78■□□□□ 0.28
COL16A1-214ENST00000488128 JAK2O60674 1132 aa16.78■□□□□ 0.28
COL16A1-214ENST00000488128 PGBD1Q96JS3 809 aa16.78■□□□□ 0.28
COL16A1-214ENST00000488128 ZSWIM6Q9HCJ5 1215 aa16.78■□□□□ 0.28
COL16A1-214ENST00000488128 ZKSCAN1P17029 563 aaPredicted RBP16.77■□□□□ 0.28
COL16A1-214ENST00000488128 PLA2G4DQ86XP0 818 aa16.77■□□□□ 0.28
COL16A1-214ENST00000488128 LEO1Q8WVC0 666 aaPredicted RBP16.77■□□□□ 0.28
COL16A1-214ENST00000488128 FTOQ9C0B1 505 aaKnown RBP eCLIP16.77■□□□□ 0.28
COL16A1-214ENST00000488128 RGPD8O14715 1765 aaPredicted RBP16.77■□□□□ 0.28
COL16A1-214ENST00000488128 RGPD1P0DJD0 1748 aa16.77■□□□□ 0.28
COL16A1-214ENST00000488128 ARHGAP23Q9P227 1491 aa16.77■□□□□ 0.27
COL16A1-214ENST00000488128 PI4KAP2A4QPH2 592 aa16.76■□□□□ 0.27
COL16A1-214ENST00000488128 TRHP20396 242 aaPredicted RBP16.76■□□□□ 0.27
COL16A1-214ENST00000488128 CREB3L3Q68CJ9 461 aa16.76■□□□□ 0.27
COL16A1-214ENST00000488128 C11orf57Q6ZUT1 292 aaPredicted RBP16.76■□□□□ 0.27
COL16A1-214ENST00000488128 PI4KAP1Q8N8J0 262 aa16.76■□□□□ 0.27
COL16A1-214ENST00000488128 NALCNQ8IZF0 1738 aa16.76■□□□□ 0.27
COL16A1-214ENST00000488128 SKILP12757 684 aa16.76■□□□□ 0.27
COL16A1-214ENST00000488128 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.76■□□□□ 0.27
COL16A1-214ENST00000488128 SLIT1O75093 1534 aa16.76■□□□□ 0.27
COL16A1-214ENST00000488128 GOLGA6L19H0YKK7 550 aa16.75■□□□□ 0.27
COL16A1-214ENST00000488128 FBXO38Q6PIJ6 1188 aa16.75■□□□□ 0.27
COL16A1-214ENST00000488128 SH2B1Q9NRF2 756 aaPredicted RBP16.75■□□□□ 0.27
COL16A1-214ENST00000488128 TMEM51Q9NW97 253 aa16.75■□□□□ 0.27
COL16A1-214ENST00000488128 PTPN14Q15678 1187 aa16.75■□□□□ 0.27
COL16A1-214ENST00000488128 LRRC8AQ8IWT6 810 aa16.75■□□□□ 0.27
COL16A1-214ENST00000488128 CCDC8Q9H0W5 538 aaPredicted RBP16.75■□□□□ 0.27
COL16A1-214ENST00000488128 ZSCAN31Q96LW9 406 aaPredicted RBP16.75■□□□□ 0.27
COL16A1-214ENST00000488128 LRRC2Q9BYS8 371 aa16.75■□□□□ 0.27
COL16A1-214ENST00000488128 PAXBP1Q9Y5B6 917 aa16.75■□□□□ 0.27
COL16A1-214ENST00000488128 TUBGCP6Q96RT7 1819 aa16.74■□□□□ 0.27
COL16A1-214ENST00000488128 TERF2Q15554 542 aa16.74■□□□□ 0.27
COL16A1-214ENST00000488128 GLRX3O76003 335 aaKnown RBP16.74■□□□□ 0.27
COL16A1-214ENST00000488128 NMIQ13287 307 aaPredicted RBP16.74■□□□□ 0.27
COL16A1-214ENST00000488128 NECTIN1Q15223 517 aa16.74■□□□□ 0.27
COL16A1-214ENST00000488128 CLASRPQ8N2M8 674 aaKnown RBP16.74■□□□□ 0.27
COL16A1-214ENST00000488128 EDC3Q96F86 508 aaKnown RBP16.74■□□□□ 0.27
COL16A1-214ENST00000488128 CLSTN2Q9H4D0 955 aa16.74■□□□□ 0.27
COL16A1-214ENST00000488128 PIK3C2AO00443 1686 aa16.73■□□□□ 0.27
COL16A1-214ENST00000488128 AOX1Q06278 1338 aa16.73■□□□□ 0.27
COL16A1-214ENST00000488128 CHGBP05060 677 aa16.73■□□□□ 0.27
COL16A1-214ENST00000488128 IFIT2P09913 472 aaKnown RBP16.73■□□□□ 0.27
COL16A1-214ENST00000488128 AACSQ86V21 672 aa16.73■□□□□ 0.27
COL16A1-214ENST00000488128 LRRN4CLQ8ND94 238 aa16.73■□□□□ 0.27
COL16A1-214ENST00000488128 RUFY2Q8WXA3 655 aa16.73■□□□□ 0.27
COL16A1-214ENST00000488128 ZBTB9Q96C00 473 aa16.73■□□□□ 0.27
COL16A1-214ENST00000488128 PHF8Q9UPP1 1060 aa16.73■□□□□ 0.27
COL16A1-214ENST00000488128 NDUFB9Q9Y6M9 179 aa16.73■□□□□ 0.27
COL16A1-214ENST00000488128 CCDC171Q6TFL3 1326 aa16.73■□□□□ 0.27
COL16A1-214ENST00000488128 KRT222Q8N1A0 295 aa16.73■□□□□ 0.27
COL16A1-214ENST00000488128 GTF3C6Q969F1 213 aa16.73■□□□□ 0.27
COL16A1-214ENST00000488128 SIL1Q9H173 461 aa16.73■□□□□ 0.27
COL16A1-214ENST00000488128 BOLA2Q9H3K6 86 aa16.73■□□□□ 0.27
COL16A1-214ENST00000488128 CHPF2Q9P2E5 772 aa16.73■□□□□ 0.27
COL16A1-214ENST00000488128 RBM6P78332 1123 aaKnown RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms