RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 FAM13BQ9NYF5 915 aa6.89□□□□□ -1.31
ECHDC1-217ENST00000488087 ERBB4Q15303 1308 aa6.88□□□□□ -1.31
ECHDC1-217ENST00000488087 FAM157BP0CG42 384 aa6.88□□□□□ -1.31
ECHDC1-217ENST00000488087 NPR3P17342 541 aa6.88□□□□□ -1.31
ECHDC1-217ENST00000488087 RGL4Q8IZJ4 473 aa6.88□□□□□ -1.31
ECHDC1-217ENST00000488087 NANOS1Q8WY41 292 aaKnown RBP6.88□□□□□ -1.31
ECHDC1-217ENST00000488087 ABHD17AQ96GS6 310 aa6.88□□□□□ -1.31
ECHDC1-217ENST00000488087 DMGDHQ9UI17 866 aaKnown RBP6.88□□□□□ -1.31
ECHDC1-217ENST00000488087 ATXN7L1Q9ULK2 861 aaPredicted RBP6.88□□□□□ -1.31
ECHDC1-217ENST00000488087 BNIP3LO60238 219 aa6.87□□□□□ -1.31
ECHDC1-217ENST00000488087 MAPTP10636 758 aaKnown RBP6.87□□□□□ -1.31
ECHDC1-217ENST00000488087 DNM1Q05193 864 aaKnown RBP6.87□□□□□ -1.31
ECHDC1-217ENST00000488087 TNP2Q05952 138 aa6.87□□□□□ -1.31
ECHDC1-217ENST00000488087 UBAP2LQ14157 1087 aaKnown RBP6.87□□□□□ -1.31
ECHDC1-217ENST00000488087 CMTR1Q8N1G2 835 aaKnown RBP6.87□□□□□ -1.31
ECHDC1-217ENST00000488087 TTC16Q8NEE8 873 aa6.87□□□□□ -1.31
ECHDC1-217ENST00000488087 GPR152Q8TDT2 470 aa6.87□□□□□ -1.31
ECHDC1-217ENST00000488087 BRPF3Q9ULD4 1205 aa6.87□□□□□ -1.31
ECHDC1-217ENST00000488087 OPLAHO14841 1288 aa6.86□□□□□ -1.31
ECHDC1-217ENST00000488087 PCSK2P16519 638 aa6.86□□□□□ -1.31
ECHDC1-217ENST00000488087 FGFR3P22607 806 aa6.86□□□□□ -1.31
ECHDC1-217ENST00000488087 INPP5BP32019 993 aa6.86□□□□□ -1.31
ECHDC1-217ENST00000488087 ARHGAP4P98171 946 aa6.86□□□□□ -1.31
ECHDC1-217ENST00000488087 TMCO4Q5TGY1 634 aa6.86□□□□□ -1.31
ECHDC1-217ENST00000488087 TMEM151AQ8N4L1 468 aa6.86□□□□□ -1.31
ECHDC1-217ENST00000488087 PIK3R5Q8WYR1 880 aa6.86□□□□□ -1.31
ECHDC1-217ENST00000488087 EDEM1Q92611 657 aa6.86□□□□□ -1.31
ECHDC1-217ENST00000488087 CFHR5Q9BXR6 569 aa6.86□□□□□ -1.31
ECHDC1-217ENST00000488087 MARK1Q9P0L2 795 aa6.86□□□□□ -1.31
ECHDC1-217ENST00000488087 KCNH4Q9UQ05 1017 aa6.86□□□□□ -1.31
ECHDC1-217ENST00000488087 USP20Q9Y2K6 914 aa6.86□□□□□ -1.31
ECHDC1-217ENST00000488087 RTCBQ9Y3I0 505 aaKnown RBP6.86□□□□□ -1.31
ECHDC1-217ENST00000488087 NDUFB5O43674 189 aa6.85□□□□□ -1.31
ECHDC1-217ENST00000488087 CD33P20138 364 aa6.85□□□□□ -1.31
ECHDC1-217ENST00000488087 SFSWAPQ12872 951 aaKnown RBP6.85□□□□□ -1.31
ECHDC1-217ENST00000488087 NDFIP2Q9NV92 336 aa6.85□□□□□ -1.31
ECHDC1-217ENST00000488087 EFSO43281 561 aa6.84□□□□□ -1.31
ECHDC1-217ENST00000488087 MAPK1P28482 360 aa6.84□□□□□ -1.31
ECHDC1-217ENST00000488087 MZF1P28698 734 aaPredicted RBP6.84□□□□□ -1.31
ECHDC1-217ENST00000488087 LAMC2Q13753 1193 aa6.84□□□□□ -1.31
ECHDC1-217ENST00000488087 ECM1Q16610 540 aa6.84□□□□□ -1.31
ECHDC1-217ENST00000488087 C8orf34Q49A92 452 aa6.84□□□□□ -1.31
ECHDC1-217ENST00000488087 TMC1Q8TDI8 760 aa6.84□□□□□ -1.31
ECHDC1-217ENST00000488087 NUDT16Q96DE0 195 aaKnown RBP6.84□□□□□ -1.31
ECHDC1-217ENST00000488087 STRN4Q9NRL3 753 aa6.84□□□□□ -1.31
ECHDC1-217ENST00000488087 CCDC87Q9NVE4 849 aa6.84□□□□□ -1.31
ECHDC1-217ENST00000488087 POLIQ9UNA4 740 aa6.84□□□□□ -1.31
ECHDC1-217ENST00000488087 FNDC3AQ9Y2H6 1198 aaKnown RBP6.84□□□□□ -1.31
ECHDC1-217ENST00000488087 FZD6O60353 706 aa6.83□□□□□ -1.32
ECHDC1-217ENST00000488087 MX2P20592 715 aa6.83□□□□□ -1.32
ECHDC1-217ENST00000488087 USP5P45974 858 aa6.83□□□□□ -1.32
ECHDC1-217ENST00000488087 MARSP56192 900 aaKnown RBP6.83□□□□□ -1.32
ECHDC1-217ENST00000488087 CCDC27Q2M243 656 aa6.83□□□□□ -1.32
ECHDC1-217ENST00000488087 GPR161Q8N6U8 529 aaKnown RBP6.83□□□□□ -1.32
ECHDC1-217ENST00000488087 UBAP1LF5GYI3 381 aa6.82□□□□□ -1.32
ECHDC1-217ENST00000488087 GDF11O95390 407 aa6.82□□□□□ -1.32
ECHDC1-217ENST00000488087 PDGFAP04085 211 aa6.82□□□□□ -1.32
ECHDC1-217ENST00000488087 RPLP1P05386 114 aaKnown RBP6.82□□□□□ -1.32
ECHDC1-217ENST00000488087 VSIG8P0DPA2 414 aa6.82□□□□□ -1.32
ECHDC1-217ENST00000488087 BMP4P12644 408 aa6.82□□□□□ -1.32
ECHDC1-217ENST00000488087 KCNQ4P56696 695 aa6.82□□□□□ -1.32
ECHDC1-217ENST00000488087 PNMA5Q96PV4 448 aa6.82□□□□□ -1.32
ECHDC1-217ENST00000488087 COL25A1Q9BXS0 654 aaPredicted RBP6.82□□□□□ -1.32
ECHDC1-217ENST00000488087 DCTN4Q9UJW0 460 aa6.82□□□□□ -1.32
ECHDC1-217ENST00000488087 PRR12Q9ULL5 1215 aa6.82□□□□□ -1.32
ECHDC1-217ENST00000488087 NSFL1CQ9UNZ2 370 aaKnown RBP6.82□□□□□ -1.32
ECHDC1-217ENST00000488087 RNF225M0QZC1 329 aaPredicted RBP6.81□□□□□ -1.32
ECHDC1-217ENST00000488087 XYLBO75191 536 aa6.81□□□□□ -1.32
ECHDC1-217ENST00000488087 GRNP28799 593 aaKnown RBP6.81□□□□□ -1.32
ECHDC1-217ENST00000488087 CTBSQ01459 385 aa6.81□□□□□ -1.32
ECHDC1-217ENST00000488087 SPEM2Q0P670 501 aa6.81□□□□□ -1.32
ECHDC1-217ENST00000488087 NEUROD1Q13562 356 aa6.81□□□□□ -1.32
ECHDC1-217ENST00000488087 CCINQ13939 588 aa6.81□□□□□ -1.32
ECHDC1-217ENST00000488087 GRIN2CQ14957 1233 aa6.81□□□□□ -1.32
ECHDC1-217ENST00000488087 KRT25Q7Z3Z0 450 aa6.81□□□□□ -1.32
ECHDC1-217ENST00000488087 PODXL2Q9NZ53 605 aa6.81□□□□□ -1.32
ECHDC1-217ENST00000488087 KCNMB2Q9Y691 235 aa6.81□□□□□ -1.32
ECHDC1-217ENST00000488087 GSK3AP49840 483 aa6.8□□□□□ -1.32
ECHDC1-217ENST00000488087 RASSF7Q02833 373 aa6.8□□□□□ -1.32
ECHDC1-217ENST00000488087 PDE3BQ13370 1112 aa6.8□□□□□ -1.32
ECHDC1-217ENST00000488087 GAS6Q14393 721 aa6.8□□□□□ -1.32
ECHDC1-217ENST00000488087 TRIP4Q15650 581 aaPredicted RBP6.8□□□□□ -1.32
ECHDC1-217ENST00000488087 FAM182BQ5T319 152 aa6.8□□□□□ -1.32
ECHDC1-217ENST00000488087 RAB44Q7Z6P3 723 aaPredicted RBP6.8□□□□□ -1.32
ECHDC1-217ENST00000488087 ZSCAN29Q8IWY8 852 aaPredicted RBP6.8□□□□□ -1.32
ECHDC1-217ENST00000488087 BHMTQ93088 406 aa6.8□□□□□ -1.32
ECHDC1-217ENST00000488087 MBIPQ9NS73 344 aa6.8□□□□□ -1.32
ECHDC1-217ENST00000488087 A6NHS1 94 aa6.79□□□□□ -1.32
ECHDC1-217ENST00000488087 SASH3O75995 380 aa6.79□□□□□ -1.32
ECHDC1-217ENST00000488087 EHHADHQ08426 723 aa6.79□□□□□ -1.32
ECHDC1-217ENST00000488087 RNFT1Q5M7Z0 435 aa6.79□□□□□ -1.32
ECHDC1-217ENST00000488087 ZNF438Q7Z4V0 828 aa6.79□□□□□ -1.32
ECHDC1-217ENST00000488087 CNTNAP3BQ96NU0 1288 aa6.79□□□□□ -1.32
ECHDC1-217ENST00000488087 CITED4Q96RK1 184 aa6.79□□□□□ -1.32
ECHDC1-217ENST00000488087 SLC30A3Q99726 388 aa6.79□□□□□ -1.32
ECHDC1-217ENST00000488087 CNTNAP3Q9BZ76 1288 aa6.79□□□□□ -1.32
ECHDC1-217ENST00000488087 GSX2Q9BZM3 304 aa6.79□□□□□ -1.32
ECHDC1-217ENST00000488087 GGNBP2Q9H3C7 697 aa6.79□□□□□ -1.32
ECHDC1-217ENST00000488087 C11orf16Q9NQ32 467 aa6.79□□□□□ -1.32
ECHDC1-217ENST00000488087 HCN2Q9UL51 889 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms