RNA–Protein interactions for RNA: ENST00000487431.1

RPL35-203, Transcript of ribosomal protein L35, humanhuman

TSL 1 (best)

Gene RPL35, Length 785 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL35-203ENST00000487431 PARP10Q53GL7 1025 aa28.1■■■□□ 2.09
RPL35-203ENST00000487431 SYNE4Q8N205 404 aa28.1■■■□□ 2.09
RPL35-203ENST00000487431 ZNF541Q9H0D2 1346 aa28.1■■■□□ 2.09
RPL35-203ENST00000487431 FZD9O00144 591 aa28.09■■■□□ 2.09
RPL35-203ENST00000487431 POTEIP0CG38 1075 aa28.09■■■□□ 2.09
RPL35-203ENST00000487431 POTEJP0CG39 1038 aa28.09■■■□□ 2.09
RPL35-203ENST00000487431 PROSER3Q2NL68 480 aa28.09■■■□□ 2.09
RPL35-203ENST00000487431 RPGRQ92834 1020 aaKnown RBP28.09■■■□□ 2.09
RPL35-203ENST00000487431 COL4A5P29400 1685 aa28.08■■■□□ 2.09
RPL35-203ENST00000487431 EIF2S2P20042 333 aaKnown RBP28.08■■■□□ 2.09
RPL35-203ENST00000487431 GRIPAP1Q4V328 841 aa28.08■■■□□ 2.09
RPL35-203ENST00000487431 PPP1R42Q7Z4L9 355 aa28.08■■■□□ 2.09
RPL35-203ENST00000487431 CRAMP1Q96RY5 1269 aa28.08■■■□□ 2.09
RPL35-203ENST00000487431 TAF1DQ9H5J8 278 aaPredicted RBP28.08■■■□□ 2.09
RPL35-203ENST00000487431 CHL1O00533 1208 aa28.06■■■□□ 2.08
RPL35-203ENST00000487431 SLC10A5Q5PT55 438 aa28.06■■■□□ 2.08
RPL35-203ENST00000487431 LDHDQ86WU2 507 aa28.06■■■□□ 2.08
RPL35-203ENST00000487431 RNF123Q5XPI4 1314 aa28.05■■■□□ 2.08
RPL35-203ENST00000487431 CCDC146Q8IYE0 955 aa28.05■■■□□ 2.08
RPL35-203ENST00000487431 RUNDC1Q96C34 613 aa28.05■■■□□ 2.08
RPL35-203ENST00000487431 RBM17Q96I25 401 aaKnown RBP28.05■■■□□ 2.08
RPL35-203ENST00000487431 TRIM35Q9UPQ4 493 aa28.05■■■□□ 2.08
RPL35-203ENST00000487431 ANXA1P04083 346 aa28.04■■■□□ 2.08
RPL35-203ENST00000487431 C3orf67Q6ZVT6 689 aa28.04■■■□□ 2.08
RPL35-203ENST00000487431 CREBZFQ9NS37 354 aa28.04■■■□□ 2.08
RPL35-203ENST00000487431 PASKQ96RG2 1323 aa28.03■■■□□ 2.08
RPL35-203ENST00000487431 UTP14AQ9BVJ6 771 aaKnown RBP28.03■■■□□ 2.08
RPL35-203ENST00000487431 GPC2Q8N158 579 aa28.02■■■□□ 2.08
RPL35-203ENST00000487431 NLRP3Q96P20 1036 aa28.02■■■□□ 2.08
RPL35-203ENST00000487431 DDX21Q9NR30 783 aaKnown RBP eCLIP28.02■■■□□ 2.08
RPL35-203ENST00000487431 HACL1Q9UJ83 578 aa28.02■■■□□ 2.08
RPL35-203ENST00000487431 PPEF1O14829 653 aaPredicted RBP28.01■■■□□ 2.07
RPL35-203ENST00000487431 HSP90AB3PQ58FF7 597 aa28.01■■■□□ 2.07
RPL35-203ENST00000487431 COPS6Q7L5N1 327 aa28.01■■■□□ 2.07
RPL35-203ENST00000487431 LTBP1Q14766 1721 aa28.01■■■□□ 2.07
RPL35-203ENST00000487431 WDR43Q15061 677 aaKnown RBP eCLIP28■■■□□ 2.07
RPL35-203ENST00000487431 NEUROD2Q15784 382 aa28■■■□□ 2.07
RPL35-203ENST00000487431 XAGE3Q8WTP9 111 aa28■■■□□ 2.07
RPL35-203ENST00000487431 JDP2Q8WYK2 163 aa28■■■□□ 2.07
RPL35-203ENST00000487431 DDX60Q8IY21 1712 aaKnown RBP28■■■□□ 2.07
RPL35-203ENST00000487431 KRT24Q2M2I5 525 aa27.99■■■□□ 2.07
RPL35-203ENST00000487431 ADAMTS8Q9UP79 889 aa27.99■■■□□ 2.07
RPL35-203ENST00000487431 TAF1P21675 1872 aa27.98■■■□□ 2.07
RPL35-203ENST00000487431 HOXB7P09629 217 aa27.98■■■□□ 2.07
RPL35-203ENST00000487431 EPHX2P34913 555 aa27.98■■■□□ 2.07
RPL35-203ENST00000487431 NLRP10Q86W26 655 aa27.98■■■□□ 2.07
RPL35-203ENST00000487431 ITGBL1O95965 494 aaPredicted RBP27.97■■■□□ 2.07
RPL35-203ENST00000487431 TCIRG1Q13488 830 aa27.97■■■□□ 2.07
RPL35-203ENST00000487431 SLC51AQ86UW1 340 aa27.97■■■□□ 2.07
RPL35-203ENST00000487431 PNMA8AQ86V59 439 aaPredicted RBP27.97■■■□□ 2.07
RPL35-203ENST00000487431 NECTIN2Q92692 538 aa27.97■■■□□ 2.07
RPL35-203ENST00000487431 ATP6V0A2Q9Y487 856 aa27.97■■■□□ 2.07
RPL35-203ENST00000487431 LRRC37AA6NMS7 1700 aa27.95■■■□□ 2.07
RPL35-203ENST00000487431 ABCC4O15439 1325 aa27.95■■■□□ 2.07
RPL35-203ENST00000487431 EIF6P56537 245 aaKnown RBP27.95■■■□□ 2.06
RPL35-203ENST00000487431 AIMP1Q12904 312 aaKnown RBP27.95■■■□□ 2.06
RPL35-203ENST00000487431 VPS33BQ9H267 617 aa27.95■■■□□ 2.06
RPL35-203ENST00000487431 PRKRIP1Q9H875 184 aaPredicted RBP27.95■■■□□ 2.06
RPL35-203ENST00000487431 EAPPQ56P03 285 aaPredicted RBP27.94■■■□□ 2.06
RPL35-203ENST00000487431 COL13A1Q5TAT6 717 aaPredicted RBP27.94■■■□□ 2.06
RPL35-203ENST00000487431 CFAP44Q96MT7 982 aa27.94■■■□□ 2.06
RPL35-203ENST00000487431 CHPF2Q9P2E5 772 aa27.94■■■□□ 2.06
RPL35-203ENST00000487431 HSPA1AP0DMV8 641 aaKnown RBP27.93■■■□□ 2.06
RPL35-203ENST00000487431 HSPA1BP0DMV9 641 aaKnown RBP27.93■■■□□ 2.06
RPL35-203ENST00000487431 LARGE2Q8N3Y3 721 aa27.93■■■□□ 2.06
RPL35-203ENST00000487431 RTFDC1Q9BY42 306 aaPredicted RBP27.93■■■□□ 2.06
RPL35-203ENST00000487431 LAS1LQ9Y4W2 734 aaKnown RBP27.93■■■□□ 2.06
RPL35-203ENST00000487431 CNTNAP1P78357 1384 aa27.92■■■□□ 2.06
RPL35-203ENST00000487431 SH3TC1Q8TE82 1336 aa27.92■■■□□ 2.06
RPL35-203ENST00000487431 TCERG1O14776 1098 aaKnown RBP27.91■■■□□ 2.06
RPL35-203ENST00000487431 BBOX1O75936 387 aa27.91■■■□□ 2.06
RPL35-203ENST00000487431 HDGFL1Q5TGJ6 251 aa27.91■■■□□ 2.06
RPL35-203ENST00000487431 PLBD2Q8NHP8 589 aa27.91■■■□□ 2.06
RPL35-203ENST00000487431 DBF4Q9UBU7 674 aaPredicted RBP27.91■■■□□ 2.06
RPL35-203ENST00000487431 HCLS1P14317 486 aaPredicted RBP27.9■■■□□ 2.06
RPL35-203ENST00000487431 SP8Q8IXZ3 490 aa27.9■■■□□ 2.06
RPL35-203ENST00000487431 TMX4Q9H1E5 349 aaPredicted RBP27.9■■■□□ 2.06
RPL35-203ENST00000487431 MKRN1Q9UHC7 482 aaKnown RBP27.9■■■□□ 2.06
RPL35-203ENST00000487431 TRMT112Q9UI30 125 aaKnown RBP27.9■■■□□ 2.06
RPL35-203ENST00000487431 TMEM88BA6NKF7 163 aa27.89■■■□□ 2.06
RPL35-203ENST00000487431 SCNN1DP51172 638 aa27.89■■■□□ 2.06
RPL35-203ENST00000487431 GJA3Q9Y6H8 435 aa27.89■■■□□ 2.06
RPL35-203ENST00000487431 TRPM7Q96QT4 1865 aa27.89■■■□□ 2.05
RPL35-203ENST00000487431 PPIP5K2O43314 1243 aa27.88■■■□□ 2.05
RPL35-203ENST00000487431 ZNF853P0CG23 659 aa27.88■■■□□ 2.05
RPL35-203ENST00000487431 NIM1KQ8IY84 436 aa27.88■■■□□ 2.05
RPL35-203ENST00000487431 CNTROBQ8N137 903 aa27.88■■■□□ 2.05
RPL35-203ENST00000487431 SUPT20HQ8NEM7 779 aa27.88■■■□□ 2.05
RPL35-203ENST00000487431 ISCA1Q9BUE6 129 aa27.88■■■□□ 2.05
RPL35-203ENST00000487431 CLEC11AQ9Y240 323 aa27.88■■■□□ 2.05
RPL35-203ENST00000487431 DUOX1Q9NRD9 1551 aa27.87■■■□□ 2.05
RPL35-203ENST00000487431 ANKRD13DQ6ZTN6 518 aa27.87■■■□□ 2.05
RPL35-203ENST00000487431 MBIPQ9NS73 344 aa27.87■■■□□ 2.05
RPL35-203ENST00000487431 LMOD1P29536 600 aaPredicted RBP27.86■■■□□ 2.05
RPL35-203ENST00000487431 GRAPQ13588 217 aa27.86■■■□□ 2.05
RPL35-203ENST00000487431 AOC3Q16853 763 aa27.86■■■□□ 2.05
RPL35-203ENST00000487431 DUSP27Q5VZP5 1158 aa27.86■■■□□ 2.05
RPL35-203ENST00000487431 MAP1SQ66K74 1059 aaPredicted RBP27.86■■■□□ 2.05
RPL35-203ENST00000487431 GRAPLQ8TC17 118 aaPredicted RBP27.86■■■□□ 2.05
RPL35-203ENST00000487431 HYPKQ9NX55 129 aa27.86■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms