RNA–Protein interactions for RNA: ENST00000487109.5

ABCA2-218, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 1 (best)

Gene ABCA2, Length 8,031 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-218ENST00000487109 MAP3K12Q12852 859 aa14.18□□□□□ -0.14
ABCA2-218ENST00000487109 CFAP58Q5T655 872 aa14.18□□□□□ -0.14
ABCA2-218ENST00000487109 JADE2Q9NQC1 790 aa14.18□□□□□ -0.14
ABCA2-218ENST00000487109 CKAP4Q07065 602 aaKnown RBP14.18□□□□□ -0.14
ABCA2-218ENST00000487109 KIAA0753Q2KHM9 967 aa14.18□□□□□ -0.14
ABCA2-218ENST00000487109 NOL3O60936 208 aaKnown RBP14.18□□□□□ -0.14
ABCA2-218ENST00000487109 DDX46Q7L014 1031 aaKnown RBP14.18□□□□□ -0.14
ABCA2-218ENST00000487109 CCDC194A0A1B0GVG4 234 aa14.17□□□□□ -0.14
ABCA2-218ENST00000487109 CTAGE5O15320 804 aa14.17□□□□□ -0.14
ABCA2-218ENST00000487109 TPD52P55327 224 aaPredicted RBP14.17□□□□□ -0.14
ABCA2-218ENST00000487109 CEP135Q66GS9 1140 aa14.17□□□□□ -0.14
ABCA2-218ENST00000487109 CCDC172P0C7W6 258 aa14.17□□□□□ -0.14
ABCA2-218ENST00000487109 CPLX3Q8WVH0 158 aa14.17□□□□□ -0.14
ABCA2-218ENST00000487109 RPGRQ92834 1020 aaKnown RBP14.17□□□□□ -0.14
ABCA2-218ENST00000487109 PLB1Q6P1J6 1458 aa14.17□□□□□ -0.14
ABCA2-218ENST00000487109 TRMT1LQ7Z2T5 733 aaKnown RBP14.17□□□□□ -0.14
ABCA2-218ENST00000487109 IFIT5Q13325 482 aaKnown RBP14.17□□□□□ -0.14
ABCA2-218ENST00000487109 TCP11L1Q9NUJ3 509 aa14.17□□□□□ -0.14
ABCA2-218ENST00000487109 PTPRCP08575 1304 aa14.17□□□□□ -0.14
ABCA2-218ENST00000487109 NSRP1Q9H0G5 558 aaKnown RBP14.17□□□□□ -0.14
ABCA2-218ENST00000487109 DUSP27Q5VZP5 1158 aa14.16□□□□□ -0.14
ABCA2-218ENST00000487109 CDCA7LQ96GN5 454 aa14.16□□□□□ -0.14
ABCA2-218ENST00000487109 CCDC12Q8WUD4 166 aaPredicted RBP14.16□□□□□ -0.14
ABCA2-218ENST00000487109 PHF8Q9UPP1 1060 aa14.16□□□□□ -0.14
ABCA2-218ENST00000487109 KIF4AO95239 1232 aa14.16□□□□□ -0.14
ABCA2-218ENST00000487109 STX6O43752 255 aa14.16□□□□□ -0.14
ABCA2-218ENST00000487109 ZC3H6P61129 1189 aaKnown RBP14.16□□□□□ -0.14
ABCA2-218ENST00000487109 HSPA4P34932 840 aa14.15□□□□□ -0.14
ABCA2-218ENST00000487109 CCDC63Q8NA47 563 aa14.15□□□□□ -0.14
ABCA2-218ENST00000487109 ESPNB1AK53 854 aa14.15□□□□□ -0.14
ABCA2-218ENST00000487109 MMRN2Q9H8L6 949 aa14.15□□□□□ -0.14
ABCA2-218ENST00000487109 PRDM10Q9NQV6 1147 aa14.15□□□□□ -0.14
ABCA2-218ENST00000487109 TTF1Q15361 905 aaPredicted RBP14.15□□□□□ -0.14
ABCA2-218ENST00000487109 ZNF213O14771 459 aa14.15□□□□□ -0.14
ABCA2-218ENST00000487109 PPP4R3BQ5MIZ7 849 aa14.15□□□□□ -0.14
ABCA2-218ENST00000487109 TRMT1Q9NXH9 659 aaKnown RBP14.15□□□□□ -0.14
ABCA2-218ENST00000487109 CCDC82Q8N4S0 544 aa14.15□□□□□ -0.14
ABCA2-218ENST00000487109 IL1RAPL2Q9NP60 686 aa14.15□□□□□ -0.14
ABCA2-218ENST00000487109 GUCY1B3Q02153 619 aa14.15□□□□□ -0.15
ABCA2-218ENST00000487109 SMC1BQ8NDV3 1235 aa14.15□□□□□ -0.15
ABCA2-218ENST00000487109 SNX16P57768 344 aa14.14□□□□□ -0.15
ABCA2-218ENST00000487109 THOC2Q8NI27 1593 aaKnown RBP14.14□□□□□ -0.15
ABCA2-218ENST00000487109 SEPT6Q14141 434 aa14.14□□□□□ -0.15
ABCA2-218ENST00000487109 CADPS2Q86UW7 1296 aa14.14□□□□□ -0.15
ABCA2-218ENST00000487109 NAIPQ13075 1403 aa14.14□□□□□ -0.15
ABCA2-218ENST00000487109 ANKS4BQ8N8V4 417 aa14.14□□□□□ -0.15
ABCA2-218ENST00000487109 SCAND2PQ9GZW5 306 aaPredicted RBP14.14□□□□□ -0.15
ABCA2-218ENST00000487109 SH2B1Q9NRF2 756 aaPredicted RBP14.14□□□□□ -0.15
ABCA2-218ENST00000487109 FANCAO15360 1455 aa14.14□□□□□ -0.15
ABCA2-218ENST00000487109 WASLO00401 505 aaPredicted RBP14.14□□□□□ -0.15
ABCA2-218ENST00000487109 GSDMDP57764 484 aa14.14□□□□□ -0.15
ABCA2-218ENST00000487109 MKRN1Q9UHC7 482 aaKnown RBP14.14□□□□□ -0.15
ABCA2-218ENST00000487109 NKTRP30414 1462 aaKnown RBP14.14□□□□□ -0.15
ABCA2-218ENST00000487109 EXOC5O00471 708 aa14.14□□□□□ -0.15
ABCA2-218ENST00000487109 PYM1Q9BRP8 204 aaKnown RBP14.14□□□□□ -0.15
ABCA2-218ENST00000487109 DBF4Q9UBU7 674 aaPredicted RBP14.14□□□□□ -0.15
ABCA2-218ENST00000487109 RASAL2Q9UJF2 1139 aa14.14□□□□□ -0.15
ABCA2-218ENST00000487109 SCAF11Q99590 1463 aaKnown RBP14.13□□□□□ -0.15
ABCA2-218ENST00000487109 CCDC144CPQ8IYA2 1237 aa14.13□□□□□ -0.15
ABCA2-218ENST00000487109 VTI1AQ96AJ9 217 aa14.13□□□□□ -0.15
ABCA2-218ENST00000487109 CDC5LQ99459 802 aaKnown RBP14.13□□□□□ -0.15
ABCA2-218ENST00000487109 GOLGA6L9A6NEM1 432 aa14.13□□□□□ -0.15
ABCA2-218ENST00000487109 SELENOOQ9BVL4 669 aa14.13□□□□□ -0.15
ABCA2-218ENST00000487109 MYO1BO43795 1136 aa14.13□□□□□ -0.15
ABCA2-218ENST00000487109 CKAP2LQ8IYA6 745 aa14.13□□□□□ -0.15
ABCA2-218ENST00000487109 LDHCP07864 332 aa14.13□□□□□ -0.15
ABCA2-218ENST00000487109 SMC6Q96SB8 1091 aa14.13□□□□□ -0.15
ABCA2-218ENST00000487109 KIF5BP33176 963 aa14.12□□□□□ -0.15
ABCA2-218ENST00000487109 MNAT1P51948 309 aa14.12□□□□□ -0.15
ABCA2-218ENST00000487109 ZSCAN30Q86W11 494 aa14.12□□□□□ -0.15
ABCA2-218ENST00000487109 EHBP1Q8NDI1 1231 aa14.12□□□□□ -0.15
ABCA2-218ENST00000487109 GTF2F1P35269 517 aaKnown RBP eCLIP14.12□□□□□ -0.151e-9■■■■■ 37.2
ABCA2-218ENST00000487109 ZBTB16Q05516 673 aa14.12□□□□□ -0.15
ABCA2-218ENST00000487109 NUTM1Q86Y26 1132 aa14.12□□□□□ -0.15
ABCA2-218ENST00000487109 IFIT3O14879 490 aaKnown RBP14.12□□□□□ -0.15
ABCA2-218ENST00000487109 NBPF8Q3BBV2 869 aa14.12□□□□□ -0.15
ABCA2-218ENST00000487109 SLFN5Q08AF3 891 aa14.12□□□□□ -0.15
ABCA2-218ENST00000487109 GSTA5Q7RTV2 222 aa14.12□□□□□ -0.15
ABCA2-218ENST00000487109 TMC6Q7Z403 805 aa14.11□□□□□ -0.15
ABCA2-218ENST00000487109 GTPBP4Q9BZE4 634 aaKnown RBP14.11□□□□□ -0.15
ABCA2-218ENST00000487109 LRRC27Q9C0I9 530 aa14.11□□□□□ -0.15
ABCA2-218ENST00000487109 AMOTL2Q9Y2J4 779 aa14.11□□□□□ -0.15
ABCA2-218ENST00000487109 DHX29Q7Z478 1369 aaKnown RBP14.11□□□□□ -0.15
ABCA2-218ENST00000487109 GMNNO75496 209 aa14.11□□□□□ -0.15
ABCA2-218ENST00000487109 FERMT3Q86UX7 667 aa14.11□□□□□ -0.15
ABCA2-218ENST00000487109 TRERF1Q96PN7 1200 aa14.11□□□□□ -0.15
ABCA2-218ENST00000487109 ZMYND15Q9H091 742 aa14.11□□□□□ -0.15
ABCA2-218ENST00000487109 ATP2C2O75185 946 aa14.11□□□□□ -0.15
ABCA2-218ENST00000487109 MX1P20591 662 aa14.11□□□□□ -0.15
ABCA2-218ENST00000487109 TRAF1Q13077 416 aa14.11□□□□□ -0.15
ABCA2-218ENST00000487109 C16orf45Q96MC5 204 aaPredicted RBP14.11□□□□□ -0.15
ABCA2-218ENST00000487109 PHACTR2O75167 634 aa14.11□□□□□ -0.15
ABCA2-218ENST00000487109 USP37Q86T82 979 aa14.11□□□□□ -0.15
ABCA2-218ENST00000487109 EXOC1Q9NV70 894 aa14.11□□□□□ -0.15
ABCA2-218ENST00000487109 GOLGA8BA8MQT2 603 aa14.11□□□□□ -0.15
ABCA2-218ENST00000487109 NEMFO60524 1076 aa14.11□□□□□ -0.15
ABCA2-218ENST00000487109 MSL1Q68DK7 614 aa14.11□□□□□ -0.15
ABCA2-218ENST00000487109 PPP1R42Q7Z4L9 355 aa14.11□□□□□ -0.15
ABCA2-218ENST00000487109 STMN4Q9H169 189 aaPredicted RBP14.11□□□□□ -0.15
ABCA2-218ENST00000487109 STX1AQ16623 288 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms