RNA–Protein interactions for RNA: ENST00000486991.1

NR1H3-223, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 4

Gene NR1H3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-223ENST00000486991 ERBB4Q15303 1308 aa16.91■□□□□ 0.3
NR1H3-223ENST00000486991 NPR1P16066 1061 aa16.9■□□□□ 0.3
NR1H3-223ENST00000486991 TTLL7Q6ZT98 887 aa16.9■□□□□ 0.3
NR1H3-223ENST00000486991 SLC51AQ86UW1 340 aa16.9■□□□□ 0.3
NR1H3-223ENST00000486991 CDCA7LQ96GN5 454 aa16.9■□□□□ 0.3
NR1H3-223ENST00000486991 MKRN1Q9UHC7 482 aaKnown RBP16.9■□□□□ 0.3
NR1H3-223ENST00000486991 ZNF652Q9Y2D9 606 aa16.9■□□□□ 0.3
NR1H3-223ENST00000486991 IL16Q14005 1332 aa16.9■□□□□ 0.3
NR1H3-223ENST00000486991 ZNF541Q9H0D2 1346 aa16.9■□□□□ 0.3
NR1H3-223ENST00000486991 KLRG2A4D1S0 409 aaPredicted RBP16.89■□□□□ 0.29
NR1H3-223ENST00000486991 GNAI1P63096 354 aa16.89■□□□□ 0.29
NR1H3-223ENST00000486991 CCDC93Q567U6 631 aa16.89■□□□□ 0.29
NR1H3-223ENST00000486991 TPTE2Q6XPS3 522 aa16.89■□□□□ 0.29
NR1H3-223ENST00000486991 TNS4Q8IZW8 715 aa16.89■□□□□ 0.29
NR1H3-223ENST00000486991 SPINK5Q9NQ38 1064 aaPredicted RBP16.89■□□□□ 0.29
NR1H3-223ENST00000486991 IFT57Q9NWB7 429 aa16.89■□□□□ 0.29
NR1H3-223ENST00000486991 NUTM1Q86Y26 1132 aa16.88■□□□□ 0.29
NR1H3-223ENST00000486991 CFAP44Q96MT7 982 aa16.88■□□□□ 0.29
NR1H3-223ENST00000486991 MBIPQ9NS73 344 aa16.88■□□□□ 0.29
NR1H3-223ENST00000486991 MAP3K15Q6ZN16 1313 aa16.88■□□□□ 0.29
NR1H3-223ENST00000486991 E9PSI1 815 aa16.87■□□□□ 0.29
NR1H3-223ENST00000486991 ANXA1P04083 346 aa16.87■□□□□ 0.29
NR1H3-223ENST00000486991 FKBP4Q02790 459 aaKnown RBP eCLIP16.87■□□□□ 0.29
NR1H3-223ENST00000486991 SLFN5Q08AF3 891 aa16.87■□□□□ 0.29
NR1H3-223ENST00000486991 SOGA3Q5TF21 947 aa16.87■□□□□ 0.29
NR1H3-223ENST00000486991 TAF1DQ9H5J8 278 aaPredicted RBP16.87■□□□□ 0.29
NR1H3-223ENST00000486991 MYH16Q9H6N6 1097 aa16.87■□□□□ 0.29
NR1H3-223ENST00000486991 ABCC12Q96J65 1359 aa16.87■□□□□ 0.29
NR1H3-223ENST00000486991 ERVV-1B6SEH8 477 aa16.86■□□□□ 0.29
NR1H3-223ENST00000486991 MYL6BP14649 208 aa16.86■□□□□ 0.29
NR1H3-223ENST00000486991 SYNE4Q8N205 404 aa16.86■□□□□ 0.29
NR1H3-223ENST00000486991 TSR2Q969E8 191 aaKnown RBP16.86■□□□□ 0.29
NR1H3-223ENST00000486991 UBN2Q6ZU65 1347 aa16.86■□□□□ 0.29
NR1H3-223ENST00000486991 LAMB2P55268 1798 aa16.86■□□□□ 0.29
NR1H3-223ENST00000486991 GPTP24298 496 aa16.85■□□□□ 0.29
NR1H3-223ENST00000486991 GTF2E1P29083 439 aaPredicted RBP16.85■□□□□ 0.29
NR1H3-223ENST00000486991 EAPPQ56P03 285 aaPredicted RBP16.85■□□□□ 0.29
NR1H3-223ENST00000486991 CREBZFQ9NS37 354 aa16.85■□□□□ 0.29
NR1H3-223ENST00000486991 HOXB7P09629 217 aa16.84■□□□□ 0.29
NR1H3-223ENST00000486991 EIF2S2P20042 333 aaKnown RBP16.84■□□□□ 0.29
NR1H3-223ENST00000486991 L3MBTL3Q96JM7 780 aaPredicted RBP16.84■□□□□ 0.29
NR1H3-223ENST00000486991 ZBTB3Q9H5J0 574 aa16.84■□□□□ 0.29
NR1H3-223ENST00000486991 FANCIQ9NVI1 1328 aa16.84■□□□□ 0.29
NR1H3-223ENST00000486991 IBTKQ9P2D0 1353 aaPredicted RBP16.84■□□□□ 0.29
NR1H3-223ENST00000486991 TCERG1O14776 1098 aaKnown RBP16.83■□□□□ 0.28
NR1H3-223ENST00000486991 RIC1Q4ADV7 1423 aa16.83■□□□□ 0.28
NR1H3-223ENST00000486991 LDHDQ86WU2 507 aa16.83■□□□□ 0.28
NR1H3-223ENST00000486991 CLEC11AQ9Y240 323 aa16.83■□□□□ 0.28
NR1H3-223ENST00000486991 COL4A5P29400 1685 aa16.82■□□□□ 0.28
NR1H3-223ENST00000486991 RNF123Q5XPI4 1314 aa16.82■□□□□ 0.28
NR1H3-223ENST00000486991 PASKQ96RG2 1323 aa16.82■□□□□ 0.28
NR1H3-223ENST00000486991 IQCA1LA6NCM1 817 aa16.82■□□□□ 0.28
NR1H3-223ENST00000486991 IARSP41252 1262 aaKnown RBP16.82■□□□□ 0.28
NR1H3-223ENST00000486991 SUSD4Q5VX71 490 aa16.82■□□□□ 0.28
NR1H3-223ENST00000486991 DUSP27Q5VZP5 1158 aa16.82■□□□□ 0.28
NR1H3-223ENST00000486991 C3orf67Q6ZVT6 689 aa16.82■□□□□ 0.28
NR1H3-223ENST00000486991 ZNF34Q8IZ26 560 aa16.82■□□□□ 0.28
NR1H3-223ENST00000486991 RTKN2Q8IZC4 609 aa16.82■□□□□ 0.28
NR1H3-223ENST00000486991 NECTIN2Q92692 538 aa16.82■□□□□ 0.28
NR1H3-223ENST00000486991 SCN4AP35499 1836 aa16.82■□□□□ 0.28
NR1H3-223ENST00000486991 ITGBL1O95965 494 aaPredicted RBP16.81■□□□□ 0.28
NR1H3-223ENST00000486991 ALDH1B1P30837 517 aa16.81■□□□□ 0.28
NR1H3-223ENST00000486991 GIGYF2Q6Y7W6 1299 aaKnown RBP16.81■□□□□ 0.28
NR1H3-223ENST00000486991 KIF6Q6ZMV9 814 aa16.81■□□□□ 0.28
NR1H3-223ENST00000486991 TRMT2AQ8IZ69 625 aaKnown RBP16.81■□□□□ 0.28
NR1H3-223ENST00000486991 DDX21Q9NR30 783 aaKnown RBP eCLIP16.81■□□□□ 0.28
NR1H3-223ENST00000486991 CHPF2Q9P2E5 772 aa16.81■□□□□ 0.28
NR1H3-223ENST00000486991 HACL1Q9UJ83 578 aa16.81■□□□□ 0.28
NR1H3-223ENST00000486991 SNED1Q8TER0 1413 aa16.8■□□□□ 0.28
NR1H3-223ENST00000486991 DDX60Q8IY21 1712 aaKnown RBP16.8■□□□□ 0.28
NR1H3-223ENST00000486991 FZD9O00144 591 aa16.8■□□□□ 0.28
NR1H3-223ENST00000486991 EPHX2P34913 555 aa16.8■□□□□ 0.28
NR1H3-223ENST00000486991 CRY2Q49AN0 593 aa16.8■□□□□ 0.28
NR1H3-223ENST00000486991 MAP1SQ66K74 1059 aaPredicted RBP16.8■□□□□ 0.28
NR1H3-223ENST00000486991 XAGE3Q8WTP9 111 aa16.8■□□□□ 0.28
NR1H3-223ENST00000486991 CACNA1FO60840 1977 aa16.8■□□□□ 0.28
NR1H3-223ENST00000486991 CNTNAP1P78357 1384 aa16.79■□□□□ 0.28
NR1H3-223ENST00000486991 FOXN1O15353 648 aa16.79■□□□□ 0.28
NR1H3-223ENST00000486991 NTSR2O95665 410 aa16.79■□□□□ 0.28
NR1H3-223ENST00000486991 VEGFBP49765 207 aa16.79■□□□□ 0.28
NR1H3-223ENST00000486991 EXOSC9Q06265 439 aaKnown RBP16.79■□□□□ 0.28
NR1H3-223ENST00000486991 HDGFL1Q5TGJ6 251 aa16.79■□□□□ 0.28
NR1H3-223ENST00000486991 NYXQ9GZU5 481 aa16.79■□□□□ 0.28
NR1H3-223ENST00000486991 GJA3Q9Y6H8 435 aa16.79■□□□□ 0.28
NR1H3-223ENST00000486991 FMR1Q06787 632 aaKnown RBP eCLIP16.78■□□□□ 0.28
NR1H3-223ENST00000486991 COPS6Q7L5N1 327 aa16.78■□□□□ 0.28
NR1H3-223ENST00000486991 C8orf58Q8NAV2 365 aa16.78■□□□□ 0.28
NR1H3-223ENST00000486991 RPGRQ92834 1020 aaKnown RBP16.78■□□□□ 0.28
NR1H3-223ENST00000486991 ADAMTSL1Q8N6G6 1762 aa16.78■□□□□ 0.28
NR1H3-223ENST00000486991 TMEM88BA6NKF7 163 aa16.77■□□□□ 0.28
NR1H3-223ENST00000486991 ELL2O00472 640 aaPredicted RBP16.77■□□□□ 0.28
NR1H3-223ENST00000486991 TAF1P21675 1872 aa16.77■□□□□ 0.27
NR1H3-223ENST00000486991 LTBP1Q14766 1721 aa16.76■□□□□ 0.27
NR1H3-223ENST00000486991 HOXA10P31260 410 aaPredicted RBP16.76■□□□□ 0.27
NR1H3-223ENST00000486991 CNTROBQ8N137 903 aa16.76■□□□□ 0.27
NR1H3-223ENST00000486991 TSPYL6Q8N831 410 aa16.76■□□□□ 0.27
NR1H3-223ENST00000486991 ZNF428Q96B54 188 aa16.76■□□□□ 0.27
NR1H3-223ENST00000486991 PSMD1Q99460 953 aa16.76■□□□□ 0.27
NR1H3-223ENST00000486991 GPC2Q8N158 579 aa16.75■□□□□ 0.27
NR1H3-223ENST00000486991 JDP2Q8WYK2 163 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms