RNA–Protein interactions for RNA: ENST00000486978.5

CTDSPL-208, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 609 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-208ENST00000486978 MASTLQ96GX5 879 aa8.65□□□□□ -1.02
CTDSPL-208ENST00000486978 TBC1D2BQ9UPU7 963 aa8.65□□□□□ -1.02
CTDSPL-208ENST00000486978 HPS5Q9UPZ3 1129 aa8.65□□□□□ -1.02
CTDSPL-208ENST00000486978 COL3A1P02461 1466 aaPredicted RBP8.64□□□□□ -1.03
CTDSPL-208ENST00000486978 UNC80Q8N2C7 3258 aa8.64□□□□□ -1.03
CTDSPL-208ENST00000486978 UBR2Q8IWV8 1755 aa8.64□□□□□ -1.03
CTDSPL-208ENST00000486978 DLL1O00548 723 aa8.64□□□□□ -1.03
CTDSPL-208ENST00000486978 CCDC93Q567U6 631 aa8.64□□□□□ -1.03
CTDSPL-208ENST00000486978 C1orf141Q5JVX7 400 aa8.64□□□□□ -1.03
CTDSPL-208ENST00000486978 RNF186Q9NXI6 227 aa8.64□□□□□ -1.03
CTDSPL-208ENST00000486978 TRPA1O75762 1119 aa8.63□□□□□ -1.03
CTDSPL-208ENST00000486978 HMOX1P09601 288 aa8.63□□□□□ -1.03
CTDSPL-208ENST00000486978 HIRAP54198 1017 aaPredicted RBP8.63□□□□□ -1.03
CTDSPL-208ENST00000486978 PDZRN3Q9UPQ7 1066 aa8.63□□□□□ -1.03
CTDSPL-208ENST00000486978 AKAP4Q5JQC9 854 aa8.62□□□□□ -1.03
CTDSPL-208ENST00000486978 NBPF15Q8N660 670 aa8.62□□□□□ -1.03
CTDSPL-208ENST00000486978 GCC1Q96CN9 775 aa8.62□□□□□ -1.03
CTDSPL-208ENST00000486978 HHIPL1Q96JK4 782 aa8.62□□□□□ -1.03
CTDSPL-208ENST00000486978 CFAP53Q96M91 514 aa8.62□□□□□ -1.03
CTDSPL-208ENST00000486978 ZNF408Q9H9D4 720 aa8.62□□□□□ -1.03
CTDSPL-208ENST00000486978 SHTN1A0MZ66 631 aa8.61□□□□□ -1.03
CTDSPL-208ENST00000486978 U2SURPO15042 1029 aaKnown RBP8.61□□□□□ -1.03
CTDSPL-208ENST00000486978 KIF23Q02241 960 aaPredicted RBP8.61□□□□□ -1.03
CTDSPL-208ENST00000486978 SOGA3Q5TF21 947 aa8.61□□□□□ -1.03
CTDSPL-208ENST00000486978 USP50Q70EL3 339 aaPredicted RBP8.61□□□□□ -1.03
CTDSPL-208ENST00000486978 CTU1Q7Z7A3 348 aaKnown RBP8.61□□□□□ -1.03
CTDSPL-208ENST00000486978 CNBD1Q8NA66 436 aa8.61□□□□□ -1.03
CTDSPL-208ENST00000486978 SLC52A2Q9HAB3 445 aa8.61□□□□□ -1.03
CTDSPL-208ENST00000486978 PAPPA2Q9BXP8 1791 aa8.61□□□□□ -1.03
CTDSPL-208ENST00000486978 KLRG2A4D1S0 409 aaPredicted RBP8.6□□□□□ -1.03
CTDSPL-208ENST00000486978 CAMTA2O94983 1202 aa8.6□□□□□ -1.03
CTDSPL-208ENST00000486978 PPP2R1AP30153 589 aa8.6□□□□□ -1.03
CTDSPL-208ENST00000486978 NOGQ13253 232 aa8.6□□□□□ -1.03
CTDSPL-208ENST00000486978 CSRNP1Q96S65 589 aa8.6□□□□□ -1.03
CTDSPL-208ENST00000486978 PGAP2Q9UHJ9 254 aa8.6□□□□□ -1.03
CTDSPL-208ENST00000486978 MRC1P22897 1456 aa8.59□□□□□ -1.03
CTDSPL-208ENST00000486978 POTEFA5A3E0 1075 aa8.59□□□□□ -1.03
CTDSPL-208ENST00000486978 A1BGP04217 495 aa8.59□□□□□ -1.03
CTDSPL-208ENST00000486978 NPR1P16066 1061 aa8.59□□□□□ -1.03
CTDSPL-208ENST00000486978 LMOD1P29536 600 aaPredicted RBP8.59□□□□□ -1.03
CTDSPL-208ENST00000486978 HUNKP57058 714 aa8.59□□□□□ -1.03
CTDSPL-208ENST00000486978 MTHFSDQ2M296 383 aaKnown RBP8.59□□□□□ -1.03
CTDSPL-208ENST00000486978 RTKN2Q8IZC4 609 aa8.59□□□□□ -1.03
CTDSPL-208ENST00000486978 TRPM4Q8TD43 1214 aa8.59□□□□□ -1.03
CTDSPL-208ENST00000486978 SETDB2Q96T68 719 aa8.59□□□□□ -1.03
CTDSPL-208ENST00000486978 GPRC5DQ9NZD1 345 aa8.59□□□□□ -1.03
CTDSPL-208ENST00000486978 COLQQ9Y215 455 aaPredicted RBP8.59□□□□□ -1.03
CTDSPL-208ENST00000486978 NUDCQ9Y266 331 aa8.59□□□□□ -1.03
CTDSPL-208ENST00000486978 RNMTO43148 476 aaKnown RBP8.58□□□□□ -1.04
CTDSPL-208ENST00000486978 PIP4K2AP48426 406 aaPredicted RBP8.58□□□□□ -1.04
CTDSPL-208ENST00000486978 EIF6P56537 245 aaKnown RBP8.58□□□□□ -1.04
CTDSPL-208ENST00000486978 ST5P78524 1137 aa8.58□□□□□ -1.04
CTDSPL-208ENST00000486978 USP48Q86UV5 1035 aa8.58□□□□□ -1.04
CTDSPL-208ENST00000486978 PSMD1Q99460 953 aa8.58□□□□□ -1.04
CTDSPL-208ENST00000486978 SAGE1Q9NXZ1 904 aa8.58□□□□□ -1.04
CTDSPL-208ENST00000486978 ZNF330Q9Y3S2 320 aaPredicted RBP8.58□□□□□ -1.04
CTDSPL-208ENST00000486978 TRIOBPQ9H2D6 2365 aa8.58□□□□□ -1.04
CTDSPL-208ENST00000486978 LAMA3Q16787 3333 aa8.57□□□□□ -1.04
CTDSPL-208ENST00000486978 CUL9Q8IWT3 2517 aa8.57□□□□□ -1.04
CTDSPL-208ENST00000486978 VSIG10Q8N0Z9 540 aa8.57□□□□□ -1.04
CTDSPL-208ENST00000486978 GAS2L2Q8NHY3 880 aa8.57□□□□□ -1.04
CTDSPL-208ENST00000486978 JDP2Q8WYK2 163 aa8.57□□□□□ -1.04
CTDSPL-208ENST00000486978 RSPH6AQ9H0K4 717 aa8.57□□□□□ -1.04
CTDSPL-208ENST00000486978 ADARB2Q9NS39 739 aaKnown RBP8.57□□□□□ -1.04
CTDSPL-208ENST00000486978 VCANP13611 3396 aa8.57□□□□□ -1.04
CTDSPL-208ENST00000486978 A0A087WZG4 1122 aa8.56□□□□□ -1.04
CTDSPL-208ENST00000486978 FAM177BA6PVY3 158 aa8.56□□□□□ -1.04
CTDSPL-208ENST00000486978 U2AF1L5P0DN76 240 aaPredicted RBP8.56□□□□□ -1.04
CTDSPL-208ENST00000486978 PRKAR2BP31323 418 aa8.56□□□□□ -1.04
CTDSPL-208ENST00000486978 GMPSP49915 693 aaPredicted RBP8.56□□□□□ -1.04
CTDSPL-208ENST00000486978 U2AF1Q01081 240 aaKnown RBP eCLIP8.56□□□□□ -1.04
CTDSPL-208ENST00000486978 CXCL9Q07325 125 aa8.56□□□□□ -1.04
CTDSPL-208ENST00000486978 RGMBQ6NW40 437 aa8.56□□□□□ -1.04
CTDSPL-208ENST00000486978 SIPA1L3O60292 1781 aaPredicted RBP8.56□□□□□ -1.04
CTDSPL-208ENST00000486978 CEP290O15078 2479 aa8.55□□□□□ -1.04
CTDSPL-208ENST00000486978 GNAT3A8MTJ3 354 aa8.55□□□□□ -1.04
CTDSPL-208ENST00000486978 NPHP1O15259 732 aa8.55□□□□□ -1.04
CTDSPL-208ENST00000486978 TBC1D8O95759 1140 aa8.55□□□□□ -1.04
CTDSPL-208ENST00000486978 EGFRP00533 1210 aa8.55□□□□□ -1.04
CTDSPL-208ENST00000486978 NBPF5PQ86XG9 351 aaPredicted RBP8.55□□□□□ -1.04
CTDSPL-208ENST00000486978 SLC17A8Q8NDX2 589 aa8.55□□□□□ -1.04
CTDSPL-208ENST00000486978 ZNF296Q8WUU4 475 aaPredicted RBP8.55□□□□□ -1.04
CTDSPL-208ENST00000486978 ZNF496Q96IT1 587 aaPredicted RBP8.55□□□□□ -1.04
CTDSPL-208ENST00000486978 R3HDMLQ9H3Y0 253 aa8.55□□□□□ -1.04
CTDSPL-208ENST00000486978 SPTBN5Q9NRC6 3674 aaKnown RBP8.55□□□□□ -1.04
CTDSPL-208ENST00000486978 EYSQ5T1H1 3165 aa8.55□□□□□ -1.04
CTDSPL-208ENST00000486978 RBBP6Q7Z6E9 1792 aaKnown RBP8.54□□□□□ -1.04
CTDSPL-208ENST00000486978 PRAMEF22A3QJZ6 481 aa8.54□□□□□ -1.04
CTDSPL-208ENST00000486978 TCERG1O14776 1098 aaKnown RBP8.54□□□□□ -1.04
CTDSPL-208ENST00000486978 KCNQ3O43525 872 aa8.54□□□□□ -1.04
CTDSPL-208ENST00000486978 IL6STP40189 918 aaPredicted RBP8.54□□□□□ -1.04
CTDSPL-208ENST00000486978 ZNF157P51786 506 aaPredicted RBP8.54□□□□□ -1.04
CTDSPL-208ENST00000486978 TEFQ10587 303 aa8.54□□□□□ -1.04
CTDSPL-208ENST00000486978 DDX10Q13206 875 aaKnown RBP8.54□□□□□ -1.04
CTDSPL-208ENST00000486978 RALBP1Q15311 655 aa8.54□□□□□ -1.04
CTDSPL-208ENST00000486978 AOC3Q16853 763 aa8.54□□□□□ -1.04
CTDSPL-208ENST00000486978 LARGE2Q8N3Y3 721 aa8.54□□□□□ -1.04
CTDSPL-208ENST00000486978 PHACTR3Q96KR7 559 aa8.54□□□□□ -1.04
CTDSPL-208ENST00000486978 KIAA0100Q14667 2235 aaKnown RBP8.53□□□□□ -1.04
CTDSPL-208ENST00000486978 CEMIPQ8WUJ3 1361 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms