RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 SLC4A10Q6U841 1118 aa16.22■□□□□ 0.19
HDAC6-229ENST00000486665 DZIP1LQ8IYY4 767 aaKnown RBP16.22■□□□□ 0.19
HDAC6-229ENST00000486665 METTL22Q9BUU2 404 aaPredicted RBP16.22■□□□□ 0.19
HDAC6-229ENST00000486665 SBF1O95248 1867 aa16.22■□□□□ 0.19
HDAC6-229ENST00000486665 ABCC4O15439 1325 aa16.21■□□□□ 0.19
HDAC6-229ENST00000486665 ZPR1O75312 459 aa16.21■□□□□ 0.19
HDAC6-229ENST00000486665 C9orf131Q5VYM1 1079 aa16.21■□□□□ 0.19
HDAC6-229ENST00000486665 GIGYF2Q6Y7W6 1299 aaKnown RBP16.21■□□□□ 0.19
HDAC6-229ENST00000486665 TMEM57Q8N5G2 664 aa16.21■□□□□ 0.19
HDAC6-229ENST00000486665 MYD88Q99836 296 aa16.21■□□□□ 0.19
HDAC6-229ENST00000486665 ATP5J2-PTCD1G3V325 749 aa16.2■□□□□ 0.18
HDAC6-229ENST00000486665 POLRMTO00411 1230 aaKnown RBP16.2■□□□□ 0.18
HDAC6-229ENST00000486665 IGKV5-2P06315 115 aa16.2■□□□□ 0.18
HDAC6-229ENST00000486665 TCIRG1Q13488 830 aa16.2■□□□□ 0.18
HDAC6-229ENST00000486665 PDE3AQ14432 1141 aa16.2■□□□□ 0.18
HDAC6-229ENST00000486665 BEND3Q5T5X7 828 aa16.2■□□□□ 0.18
HDAC6-229ENST00000486665 NRXN2Q9P2S2 1712 aa16.19■□□□□ 0.18
HDAC6-229ENST00000486665 TM4SF1P30408 202 aa16.19■□□□□ 0.18
HDAC6-229ENST00000486665 IRX6P78412 446 aaPredicted RBP16.19■□□□□ 0.18
HDAC6-229ENST00000486665 FTSJ3Q8IY81 847 aaKnown RBP16.19■□□□□ 0.18
HDAC6-229ENST00000486665 ISCA1Q9BUE6 129 aa16.19■□□□□ 0.18
HDAC6-229ENST00000486665 MS4A1P11836 297 aa16.18■□□□□ 0.18
HDAC6-229ENST00000486665 CWF19L2Q2TBE0 894 aaKnown RBP16.18■□□□□ 0.18
HDAC6-229ENST00000486665 INTS3Q68E01 1043 aaKnown RBP16.18■□□□□ 0.18
HDAC6-229ENST00000486665 CLEC4GQ6UXB4 293 aa16.18■□□□□ 0.18
HDAC6-229ENST00000486665 ZNF34Q8IZ26 560 aa16.18■□□□□ 0.18
HDAC6-229ENST00000486665 PIM2Q9P1W9 311 aa16.18■□□□□ 0.18
HDAC6-229ENST00000486665 COG6Q9Y2V7 657 aa16.18■□□□□ 0.18
HDAC6-229ENST00000486665 WDR90Q96KV7 1748 aa16.17■□□□□ 0.18
HDAC6-229ENST00000486665 TOMM70O94826 608 aa16.17■□□□□ 0.18
HDAC6-229ENST00000486665 GPTP24298 496 aa16.17■□□□□ 0.18
HDAC6-229ENST00000486665 CCT4P50991 539 aaKnown RBP16.17■□□□□ 0.18
HDAC6-229ENST00000486665 DALRD3Q5D0E6 543 aaKnown RBP16.17■□□□□ 0.18
HDAC6-229ENST00000486665 TBC1D9BQ66K14 1250 aa16.17■□□□□ 0.18
HDAC6-229ENST00000486665 DNAJC5GQ8N7S2 189 aa16.17■□□□□ 0.18
HDAC6-229ENST00000486665 LINS1Q8NG48 757 aa16.17■□□□□ 0.18
HDAC6-229ENST00000486665 SRCIN1Q9C0H9 1055 aa16.17■□□□□ 0.18
HDAC6-229ENST00000486665 DLEC1Q9Y238 1755 aa16.17■□□□□ 0.18
HDAC6-229ENST00000486665 NEURL1BA8MQ27 555 aa16.16■□□□□ 0.18
HDAC6-229ENST00000486665 RGL2O15211 777 aa16.16■□□□□ 0.18
HDAC6-229ENST00000486665 NEXNQ0ZGT2 675 aa16.16■□□□□ 0.18
HDAC6-229ENST00000486665 TRIM28Q13263 835 aaKnown RBP16.16■□□□□ 0.18
HDAC6-229ENST00000486665 HSP90AB3PQ58FF7 597 aa16.16■□□□□ 0.18
HDAC6-229ENST00000486665 CRBNQ96SW2 442 aa16.16■□□□□ 0.18
HDAC6-229ENST00000486665 ZNF652Q9Y2D9 606 aa16.16■□□□□ 0.18
HDAC6-229ENST00000486665 ARFGEF2Q9Y6D5 1785 aa16.15■□□□□ 0.18
HDAC6-229ENST00000486665 PRELPP51888 382 aa16.15■□□□□ 0.18
HDAC6-229ENST00000486665 HTRA3P83110 453 aa16.15■□□□□ 0.18
HDAC6-229ENST00000486665 NFIXQ14938 502 aa16.15■□□□□ 0.18
HDAC6-229ENST00000486665 BICDL1Q6ZP65 573 aa16.15■□□□□ 0.18
HDAC6-229ENST00000486665 NLRP10Q86W26 655 aa16.15■□□□□ 0.18
HDAC6-229ENST00000486665 NIP7Q9Y221 180 aaKnown RBP eCLIP16.15■□□□□ 0.18
HDAC6-229ENST00000486665 UBN2Q6ZU65 1347 aa16.15■□□□□ 0.18
HDAC6-229ENST00000486665 CARMIL3Q8ND23 1372 aa16.14■□□□□ 0.17
HDAC6-229ENST00000486665 ALDH1L1O75891 902 aa16.14■□□□□ 0.17
HDAC6-229ENST00000486665 APLP1P51693 650 aa16.14■□□□□ 0.17
HDAC6-229ENST00000486665 RASSF7Q02833 373 aa16.14■□□□□ 0.17
HDAC6-229ENST00000486665 GCKRQ14397 625 aa16.14■□□□□ 0.17
HDAC6-229ENST00000486665 MVPQ14764 893 aaKnown RBP16.14■□□□□ 0.17
HDAC6-229ENST00000486665 ITPRIPQ8IWB1 547 aa16.14■□□□□ 0.17
HDAC6-229ENST00000486665 JARID2Q92833 1246 aaPredicted RBP16.14■□□□□ 0.17
HDAC6-229ENST00000486665 RNF181Q9P0P0 153 aa16.14■□□□□ 0.17
HDAC6-229ENST00000486665 BCORQ6W2J9 1755 aa16.13■□□□□ 0.17
HDAC6-229ENST00000486665 ZBTB7BO15156 539 aaPredicted RBP16.13■□□□□ 0.17
HDAC6-229ENST00000486665 SUSD4Q5VX71 490 aa16.13■□□□□ 0.17
HDAC6-229ENST00000486665 CCDC191Q8NCU4 936 aa16.13■□□□□ 0.17
HDAC6-229ENST00000486665 CWC25Q9NXE8 425 aaPredicted RBP16.13■□□□□ 0.17
HDAC6-229ENST00000486665 SCN7AQ01118 1682 aa16.13■□□□□ 0.17
HDAC6-229ENST00000486665 CCDC88AQ3V6T2 1871 aa16.13■□□□□ 0.17
HDAC6-229ENST00000486665 ANKRD31Q8N7Z5 1873 aa16.13■□□□□ 0.17
HDAC6-229ENST00000486665 NUP98P52948 1817 aa16.12■□□□□ 0.17
HDAC6-229ENST00000486665 TNRC6CQ9HCJ0 1690 aaKnown RBP16.12■□□□□ 0.17
HDAC6-229ENST00000486665 FAM177BA6PVY3 158 aa16.12■□□□□ 0.17
HDAC6-229ENST00000486665 EXOC6Q8TAG9 804 aa16.12■□□□□ 0.17
HDAC6-229ENST00000486665 SETDB2Q96T68 719 aa16.12■□□□□ 0.17
HDAC6-229ENST00000486665 USP44Q9H0E7 712 aa16.12■□□□□ 0.17
HDAC6-229ENST00000486665 SYNE4Q8N205 404 aa16.11■□□□□ 0.17
HDAC6-229ENST00000486665 RBM46Q8TBY0 533 aaKnown RBP16.11■□□□□ 0.17
HDAC6-229ENST00000486665 MEIS3Q99687 375 aa16.11■□□□□ 0.17
HDAC6-229ENST00000486665 RRAGCQ9HB90 399 aa16.11■□□□□ 0.17
HDAC6-229ENST00000486665 TIAM2Q8IVF5 1701 aa16.11■□□□□ 0.17
HDAC6-229ENST00000486665 H7C1W4 665 aa16.1■□□□□ 0.17
HDAC6-229ENST00000486665 SERPINB2P05120 415 aa16.1■□□□□ 0.17
HDAC6-229ENST00000486665 NBPF7P0C2Y1 421 aaPredicted RBP16.1■□□□□ 0.17
HDAC6-229ENST00000486665 PARP10Q53GL7 1025 aa16.1■□□□□ 0.17
HDAC6-229ENST00000486665 RTL5Q5HYW3 569 aaPredicted RBP16.1■□□□□ 0.17
HDAC6-229ENST00000486665 COL11A2P13942 1736 aaPredicted RBP16.1■□□□□ 0.17
HDAC6-229ENST00000486665 PCNTO95613 3336 aa16.09■□□□□ 0.17
HDAC6-229ENST00000486665 GRM8O00222 908 aa16.09■□□□□ 0.17
HDAC6-229ENST00000486665 NTSR2O95665 410 aa16.09■□□□□ 0.17
HDAC6-229ENST00000486665 CASP7P55210 303 aa16.09■□□□□ 0.17
HDAC6-229ENST00000486665 FAM89AQ96GI7 184 aa16.09■□□□□ 0.17
HDAC6-229ENST00000486665 UTP14AQ9BVJ6 771 aaKnown RBP16.09■□□□□ 0.17
HDAC6-229ENST00000486665 C9orf78Q9NZ63 289 aaPredicted RBP16.09■□□□□ 0.17
HDAC6-229ENST00000486665 TRMT112Q9UI30 125 aaKnown RBP16.09■□□□□ 0.17
HDAC6-229ENST00000486665 DDX19BQ9UMR2 479 aa16.09■□□□□ 0.17
HDAC6-229ENST00000486665 PCCAP05165 728 aaPredicted RBP16.08■□□□□ 0.16
HDAC6-229ENST00000486665 PPP1R42Q7Z4L9 355 aa16.08■□□□□ 0.16
HDAC6-229ENST00000486665 ZBTB38Q8NAP3 1195 aaPredicted RBP16.08■□□□□ 0.16
HDAC6-229ENST00000486665 ZBTB40Q9NUA8 1239 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms