RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 INTS5Q6P9B9 1019 aaKnown RBP8.75□□□□□ -1.01
UBR4-214ENST00000486515 MYD88Q99836 296 aa8.75□□□□□ -1.01
UBR4-214ENST00000486515 ZBTB3Q9H5J0 574 aa8.75□□□□□ -1.01
UBR4-214ENST00000486515 CREBZFQ9NS37 354 aa8.75□□□□□ -1.01
UBR4-214ENST00000486515 C9orf78Q9NZ63 289 aaPredicted RBP8.75□□□□□ -1.01
UBR4-214ENST00000486515 TBC1D2BQ9UPU7 963 aa8.75□□□□□ -1.01
UBR4-214ENST00000486515 LAMB4A4D0S4 1761 aa8.75□□□□□ -1.01
UBR4-214ENST00000486515 MAP3K15Q6ZN16 1313 aa8.75□□□□□ -1.01
UBR4-214ENST00000486515 CUL9Q8IWT3 2517 aa8.75□□□□□ -1.01
UBR4-214ENST00000486515 COL15A1P39059 1388 aa8.74□□□□□ -1.01
UBR4-214ENST00000486515 KAT6BQ8WYB5 2073 aa8.74□□□□□ -1.01
UBR4-214ENST00000486515 CICQ96RK0 1608 aaPredicted RBP8.74□□□□□ -1.01
UBR4-214ENST00000486515 A0A0C4DFX4 3053 aa8.74□□□□□ -1.01
UBR4-214ENST00000486515 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.74□□□□□ -1.01
UBR4-214ENST00000486515 NBPF26B4DH59 902 aa8.74□□□□□ -1.01
UBR4-214ENST00000486515 ALDH1L1O75891 902 aa8.74□□□□□ -1.01
UBR4-214ENST00000486515 EIF5P55010 431 aaKnown RBP8.74□□□□□ -1.01
UBR4-214ENST00000486515 AAMPQ13685 434 aa8.74□□□□□ -1.01
UBR4-214ENST00000486515 NBPF10Q6P3W6 841 aaKnown RBP8.74□□□□□ -1.01
UBR4-214ENST00000486515 CLEC4GQ6UXB4 293 aa8.74□□□□□ -1.01
UBR4-214ENST00000486515 G2E3Q7L622 706 aa8.74□□□□□ -1.01
UBR4-214ENST00000486515 NBPF15Q8N660 670 aa8.74□□□□□ -1.01
UBR4-214ENST00000486515 CNTNAP1P78357 1384 aa8.73□□□□□ -1.01
UBR4-214ENST00000486515 F6X3S4 739 aa8.73□□□□□ -1.01
UBR4-214ENST00000486515 GNAI3P08754 354 aa8.73□□□□□ -1.01
UBR4-214ENST00000486515 IRX6P78412 446 aaPredicted RBP8.73□□□□□ -1.01
UBR4-214ENST00000486515 FKBP8Q14318 412 aa8.73□□□□□ -1.01
UBR4-214ENST00000486515 MVPQ14764 893 aaKnown RBP8.73□□□□□ -1.01
UBR4-214ENST00000486515 C9orf131Q5VYM1 1079 aa8.73□□□□□ -1.01
UBR4-214ENST00000486515 ERICH6BQ5W0A0 696 aa8.73□□□□□ -1.01
UBR4-214ENST00000486515 GIGYF2Q6Y7W6 1299 aaKnown RBP8.73□□□□□ -1.01
UBR4-214ENST00000486515 TTLL7Q6ZT98 887 aa8.73□□□□□ -1.01
UBR4-214ENST00000486515 ARHGAP27Q6ZUM4 889 aa8.73□□□□□ -1.01
UBR4-214ENST00000486515 PPP1R42Q7Z4L9 355 aa8.73□□□□□ -1.01
UBR4-214ENST00000486515 LINS1Q8NG48 757 aa8.73□□□□□ -1.01
UBR4-214ENST00000486515 PANK1Q8TE04 598 aa8.73□□□□□ -1.01
UBR4-214ENST00000486515 METTL22Q9BUU2 404 aaPredicted RBP8.73□□□□□ -1.01
UBR4-214ENST00000486515 NARFQ9UHQ1 456 aa8.73□□□□□ -1.01
UBR4-214ENST00000486515 COG6Q9Y2V7 657 aa8.73□□□□□ -1.01
UBR4-214ENST00000486515 TJP1Q07157 1748 aa8.73□□□□□ -1.01
UBR4-214ENST00000486515 RGL2O15211 777 aa8.72□□□□□ -1.01
UBR4-214ENST00000486515 UBTFL1P0CB47 393 aaPredicted RBP8.72□□□□□ -1.01
UBR4-214ENST00000486515 TCIRG1Q13488 830 aa8.72□□□□□ -1.01
UBR4-214ENST00000486515 PARP10Q53GL7 1025 aa8.72□□□□□ -1.01
UBR4-214ENST00000486515 USPL1Q5W0Q7 1092 aa8.72□□□□□ -1.01
UBR4-214ENST00000486515 INTS3Q68E01 1043 aaKnown RBP8.72□□□□□ -1.01
UBR4-214ENST00000486515 TMEM57Q8N5G2 664 aa8.72□□□□□ -1.01
UBR4-214ENST00000486515 SLC17A8Q8NDX2 589 aa8.72□□□□□ -1.01
UBR4-214ENST00000486515 ARHGEF1Q92888 912 aaKnown RBP8.72□□□□□ -1.01
UBR4-214ENST00000486515 SETDB2Q96T68 719 aa8.72□□□□□ -1.01
UBR4-214ENST00000486515 NYXQ9GZU5 481 aa8.72□□□□□ -1.01
UBR4-214ENST00000486515 CWC25Q9NXE8 425 aaPredicted RBP8.72□□□□□ -1.01
UBR4-214ENST00000486515 ATP5J2-PTCD1G3V325 749 aa8.71□□□□□ -1.02
UBR4-214ENST00000486515 VEGFBP49765 207 aa8.71□□□□□ -1.02
UBR4-214ENST00000486515 BICDL1Q6ZP65 573 aa8.71□□□□□ -1.02
UBR4-214ENST00000486515 ERICH6Q7L0X2 663 aa8.71□□□□□ -1.02
UBR4-214ENST00000486515 NLGN1Q8N2Q7 840 aa8.71□□□□□ -1.02
UBR4-214ENST00000486515 MPNDQ8N594 471 aa8.71□□□□□ -1.02
UBR4-214ENST00000486515 CCDC191Q8NCU4 936 aa8.71□□□□□ -1.02
UBR4-214ENST00000486515 MCOLN1Q9GZU1 580 aa8.71□□□□□ -1.02
UBR4-214ENST00000486515 NIP7Q9Y221 180 aaKnown RBP eCLIP8.71□□□□□ -1.02
UBR4-214ENST00000486515 ABCC4O15439 1325 aa8.71□□□□□ -1.02
UBR4-214ENST00000486515 RNF123Q5XPI4 1314 aa8.71□□□□□ -1.02
UBR4-214ENST00000486515 CAMTA2O94983 1202 aa8.7□□□□□ -1.02
UBR4-214ENST00000486515 GPTP24298 496 aa8.7□□□□□ -1.02
UBR4-214ENST00000486515 BEND3Q5T5X7 828 aa8.7□□□□□ -1.02
UBR4-214ENST00000486515 TPTE2Q6XPS3 522 aa8.7□□□□□ -1.02
UBR4-214ENST00000486515 NBPF5PQ86XG9 351 aaPredicted RBP8.7□□□□□ -1.02
UBR4-214ENST00000486515 CRBNQ96SW2 442 aa8.7□□□□□ -1.02
UBR4-214ENST00000486515 UTP14AQ9BVJ6 771 aaKnown RBP8.7□□□□□ -1.02
UBR4-214ENST00000486515 ZBTB47Q9UFB7 747 aaPredicted RBP8.7□□□□□ -1.02
UBR4-214ENST00000486515 TRMT112Q9UI30 125 aaKnown RBP8.7□□□□□ -1.02
UBR4-214ENST00000486515 USP42Q9H9J4 1324 aaKnown RBP8.7□□□□□ -1.02
UBR4-214ENST00000486515 FAM177BA6PVY3 158 aa8.69□□□□□ -1.02
UBR4-214ENST00000486515 NEURL1BA8MQ27 555 aa8.69□□□□□ -1.02
UBR4-214ENST00000486515 GRM8O00222 908 aa8.69□□□□□ -1.02
UBR4-214ENST00000486515 HMMRO75330 724 aa8.69□□□□□ -1.02
UBR4-214ENST00000486515 GNAI2P04899 355 aa8.69□□□□□ -1.02
UBR4-214ENST00000486515 ST5P78524 1137 aa8.69□□□□□ -1.02
UBR4-214ENST00000486515 CWF19L2Q2TBE0 894 aaKnown RBP8.69□□□□□ -1.02
UBR4-214ENST00000486515 C20orf194Q5TEA3 1177 aa8.69□□□□□ -1.02
UBR4-214ENST00000486515 LRP10Q7Z4F1 713 aa8.69□□□□□ -1.02
UBR4-214ENST00000486515 COL23A1Q86Y22 540 aaPredicted RBP8.69□□□□□ -1.02
UBR4-214ENST00000486515 PARP3Q9Y6F1 533 aa8.69□□□□□ -1.02
UBR4-214ENST00000486515 LY75O60449 1722 aa8.68□□□□□ -1.02
UBR4-214ENST00000486515 COL5A3P25940 1745 aaPredicted RBP8.68□□□□□ -1.02
UBR4-214ENST00000486515 VEGFAP15692 232 aaPredicted RBP8.68□□□□□ -1.02
UBR4-214ENST00000486515 SOX10P56693 466 aa8.68□□□□□ -1.02
UBR4-214ENST00000486515 MAP2K1Q02750 393 aaPredicted RBP8.68□□□□□ -1.02
UBR4-214ENST00000486515 TRIM28Q13263 835 aaKnown RBP8.68□□□□□ -1.02
UBR4-214ENST00000486515 GCKRQ14397 625 aa8.68□□□□□ -1.02
UBR4-214ENST00000486515 HLFQ16534 295 aa8.68□□□□□ -1.02
UBR4-214ENST00000486515 EXOC6Q8TAG9 804 aa8.68□□□□□ -1.02
UBR4-214ENST00000486515 CCDC136Q96JN2 1154 aa8.68□□□□□ -1.02
UBR4-214ENST00000486515 SRP68Q9UHB9 627 aaKnown RBP8.68□□□□□ -1.02
UBR4-214ENST00000486515 BCS1LQ9Y276 419 aa8.68□□□□□ -1.02
UBR4-214ENST00000486515 CHMP3Q9Y3E7 222 aa8.68□□□□□ -1.02
UBR4-214ENST00000486515 PCCAP05165 728 aaPredicted RBP8.67□□□□□ -1.02
UBR4-214ENST00000486515 RLBP1P12271 317 aa8.67□□□□□ -1.02
UBR4-214ENST00000486515 FXR1P51114 621 aaKnown RBP eCLIP8.67□□□□□ -1.024e-6■■□□□ 14.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms