RNA–Protein interactions for RNA: ENST00000486335.1

CCDC142-208, Transcript of coiled-coil domain containing 142, humanhuman

TSL 5

Gene CCDC142, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-208ENST00000486335 GRM1Q13255 1194 aa12.39□□□□□ -0.43
CCDC142-208ENST00000486335 GJA3Q9Y6H8 435 aa12.39□□□□□ -0.43
CCDC142-208ENST00000486335 BTBD11A6QL63 1104 aa12.38□□□□□ -0.43
CCDC142-208ENST00000486335 RGL2O15211 777 aa12.38□□□□□ -0.43
CCDC142-208ENST00000486335 NPHP1O15259 732 aa12.38□□□□□ -0.43
CCDC142-208ENST00000486335 ALDH1B1P30837 517 aa12.38□□□□□ -0.43
CCDC142-208ENST00000486335 HOXA10P31260 410 aaPredicted RBP12.38□□□□□ -0.43
CCDC142-208ENST00000486335 ECE1P42892 770 aa12.38□□□□□ -0.43
CCDC142-208ENST00000486335 HIRAP54198 1017 aaPredicted RBP12.38□□□□□ -0.43
CCDC142-208ENST00000486335 DLK2Q6UY11 383 aa12.38□□□□□ -0.43
CCDC142-208ENST00000486335 C3orf67Q6ZVT6 689 aa12.38□□□□□ -0.43
CCDC142-208ENST00000486335 PGAP2Q9UHJ9 254 aa12.38□□□□□ -0.43
CCDC142-208ENST00000486335 DIEXFQ68CQ4 756 aaKnown RBP12.37□□□□□ -0.43
CCDC142-208ENST00000486335 USP50Q70EL3 339 aaPredicted RBP12.37□□□□□ -0.43
CCDC142-208ENST00000486335 NUTM1Q86Y26 1132 aa12.37□□□□□ -0.43
CCDC142-208ENST00000486335 GAS2L2Q8NHY3 880 aa12.37□□□□□ -0.43
CCDC142-208ENST00000486335 SNRPA1P09661 255 aaKnown RBP12.36□□□□□ -0.43
CCDC142-208ENST00000486335 EIF6P56537 245 aaKnown RBP12.36□□□□□ -0.43
CCDC142-208ENST00000486335 PAXIP1Q6ZW49 1069 aaPredicted RBP12.36□□□□□ -0.43
CCDC142-208ENST00000486335 JDP2Q8WYK2 163 aa12.36□□□□□ -0.43
CCDC142-208ENST00000486335 CXCL9Q07325 125 aa12.35□□□□□ -0.43
CCDC142-208ENST00000486335 CIAPIN1Q6FI81 312 aa12.35□□□□□ -0.43
CCDC142-208ENST00000486335 HHIPL1Q96JK4 782 aa12.35□□□□□ -0.43
CCDC142-208ENST00000486335 GLIS2Q9BZE0 524 aaPredicted RBP12.35□□□□□ -0.43
CCDC142-208ENST00000486335 GPRC5DQ9NZD1 345 aa12.35□□□□□ -0.43
CCDC142-208ENST00000486335 SHTN1A0MZ66 631 aa12.34□□□□□ -0.43
CCDC142-208ENST00000486335 CELF2O95319 508 aaKnown RBP12.34□□□□□ -0.43
CCDC142-208ENST00000486335 BRPF1P55201 1214 aaPredicted RBP12.34□□□□□ -0.43
CCDC142-208ENST00000486335 CC2D1BQ5T0F9 858 aaKnown RBP12.34□□□□□ -0.43
CCDC142-208ENST00000486335 CC2D2BQ6DHV5 1058 aa12.34□□□□□ -0.43
CCDC142-208ENST00000486335 MCM10Q7L590 875 aa12.34□□□□□ -0.43
CCDC142-208ENST00000486335 LARGE2Q8N3Y3 721 aa12.34□□□□□ -0.43
CCDC142-208ENST00000486335 BEGAINQ9BUH8 593 aa12.34□□□□□ -0.43
CCDC142-208ENST00000486335 RSPH6AQ9H0K4 717 aa12.34□□□□□ -0.43
CCDC142-208ENST00000486335 ZNF652Q9Y2D9 606 aa12.34□□□□□ -0.43
CCDC142-208ENST00000486335 UBN2Q6ZU65 1347 aa12.34□□□□□ -0.43
CCDC142-208ENST00000486335 U2SURPO15042 1029 aaKnown RBP12.33□□□□□ -0.44
CCDC142-208ENST00000486335 LMOD1P29536 600 aaPredicted RBP12.33□□□□□ -0.44
CCDC142-208ENST00000486335 DGKZQ13574 1117 aa12.33□□□□□ -0.44
CCDC142-208ENST00000486335 DCTN1Q14203 1278 aa12.33□□□□□ -0.44
CCDC142-208ENST00000486335 SUSD4Q5VX71 490 aa12.33□□□□□ -0.44
CCDC142-208ENST00000486335 TTLL7Q6ZT98 887 aa12.33□□□□□ -0.44
CCDC142-208ENST00000486335 CRAMP1Q96RY5 1269 aa12.33□□□□□ -0.44
CCDC142-208ENST00000486335 ADARB2Q9NS39 739 aaKnown RBP12.33□□□□□ -0.44
CCDC142-208ENST00000486335 TRPM7Q96QT4 1865 aa12.33□□□□□ -0.44
CCDC142-208ENST00000486335 KIF7Q2M1P5 1343 aa12.33□□□□□ -0.44
CCDC142-208ENST00000486335 NPC1L1Q9UHC9 1359 aa12.32□□□□□ -0.44
CCDC142-208ENST00000486335 FAM155AB1AL88 458 aaPredicted RBP12.32□□□□□ -0.44
CCDC142-208ENST00000486335 TCERG1O14776 1098 aaKnown RBP12.32□□□□□ -0.44
CCDC142-208ENST00000486335 CA12O43570 354 aa12.32□□□□□ -0.44
CCDC142-208ENST00000486335 PRKAR2BP31323 418 aa12.32□□□□□ -0.44
CCDC142-208ENST00000486335 AOC3Q16853 763 aa12.32□□□□□ -0.44
CCDC142-208ENST00000486335 NPM2Q86SE8 214 aaKnown RBP12.32□□□□□ -0.44
CCDC142-208ENST00000486335 TRPM4Q8TD43 1214 aa12.32□□□□□ -0.44
CCDC142-208ENST00000486335 MIS18AQ9NYP9 233 aa12.32□□□□□ -0.44
CCDC142-208ENST00000486335 RIC1Q4ADV7 1423 aa12.31□□□□□ -0.44
CCDC142-208ENST00000486335 GMPSP49915 693 aaPredicted RBP12.31□□□□□ -0.44
CCDC142-208ENST00000486335 ZNF34Q8IZ26 560 aa12.31□□□□□ -0.44
CCDC142-208ENST00000486335 CFAP44Q96MT7 982 aa12.31□□□□□ -0.44
CCDC142-208ENST00000486335 RTFDC1Q9BY42 306 aaPredicted RBP12.31□□□□□ -0.44
CCDC142-208ENST00000486335 YDJCA8MPS7 323 aa12.3□□□□□ -0.44
CCDC142-208ENST00000486335 ERVV-1B6SEH8 477 aa12.3□□□□□ -0.44
CCDC142-208ENST00000486335 NTSR2O95665 410 aa12.3□□□□□ -0.44
CCDC142-208ENST00000486335 DDX10Q13206 875 aaKnown RBP12.3□□□□□ -0.44
CCDC142-208ENST00000486335 PPEF1O14829 653 aaPredicted RBP12.29□□□□□ -0.44
CCDC142-208ENST00000486335 PPIP5K2O43314 1243 aa12.29□□□□□ -0.44
CCDC142-208ENST00000486335 SOX10P56693 466 aa12.29□□□□□ -0.44
CCDC142-208ENST00000486335 GRIPAP1Q4V328 841 aa12.29□□□□□ -0.44
CCDC142-208ENST00000486335 LRP10Q7Z4F1 713 aa12.29□□□□□ -0.44
CCDC142-208ENST00000486335 NIM1KQ8IY84 436 aa12.29□□□□□ -0.44
CCDC142-208ENST00000486335 NGEFQ8N5V2 710 aa12.29□□□□□ -0.44
CCDC142-208ENST00000486335 ZC3H15Q8WU90 426 aaKnown RBP12.29□□□□□ -0.44
CCDC142-208ENST00000486335 ZNRF3Q9ULT6 936 aa12.29□□□□□ -0.44
CCDC142-208ENST00000486335 ATP6V0A2Q9Y487 856 aa12.29□□□□□ -0.44
CCDC142-208ENST00000486335 MAP3K15Q6ZN16 1313 aa12.29□□□□□ -0.44
CCDC142-208ENST00000486335 EGFRP00533 1210 aa12.28□□□□□ -0.44
CCDC142-208ENST00000486335 GPTP24298 496 aa12.28□□□□□ -0.44
CCDC142-208ENST00000486335 GTF2E1P29083 439 aaPredicted RBP12.28□□□□□ -0.44
CCDC142-208ENST00000486335 SLC10A5Q5PT55 438 aa12.28□□□□□ -0.44
CCDC142-208ENST00000486335 USP48Q86UV5 1035 aa12.28□□□□□ -0.44
CCDC142-208ENST00000486335 CDC37L1Q7L3B6 337 aa12.27□□□□□ -0.45
CCDC142-208ENST00000486335 RBM17Q96I25 401 aaKnown RBP12.27□□□□□ -0.45
CCDC142-208ENST00000486335 NYXQ9GZU5 481 aa12.27□□□□□ -0.45
CCDC142-208ENST00000486335 VPS33BQ9H267 617 aa12.27□□□□□ -0.45
CCDC142-208ENST00000486335 ZNF408Q9H9D4 720 aa12.27□□□□□ -0.45
CCDC142-208ENST00000486335 IBTKQ9P2D0 1353 aaPredicted RBP12.27□□□□□ -0.45
CCDC142-208ENST00000486335 RAD17O75943 681 aa12.26□□□□□ -0.45
CCDC142-208ENST00000486335 KIAA2012Q0VF49 1180 aa12.26□□□□□ -0.45
CCDC142-208ENST00000486335 NOGQ13253 232 aa12.26□□□□□ -0.45
CCDC142-208ENST00000486335 TAF7Q15545 349 aaPredicted RBP12.26□□□□□ -0.45
CCDC142-208ENST00000486335 RPGRQ92834 1020 aaKnown RBP12.26□□□□□ -0.45
CCDC142-208ENST00000486335 RNF186Q9NXI6 227 aa12.26□□□□□ -0.45
CCDC142-208ENST00000486335 CNOT7Q9UIV1 285 aaKnown RBP12.26□□□□□ -0.45
CCDC142-208ENST00000486335 ABCC4O15439 1325 aa12.26□□□□□ -0.45
CCDC142-208ENST00000486335 HUNKP57058 714 aa12.25□□□□□ -0.45
CCDC142-208ENST00000486335 EIF4A1P60842 406 aaKnown RBP12.25□□□□□ -0.45
CCDC142-208ENST00000486335 KIF23Q02241 960 aaPredicted RBP12.25□□□□□ -0.45
CCDC142-208ENST00000486335 PDIA6Q15084 440 aa12.25□□□□□ -0.45
CCDC142-208ENST00000486335 SAMD7Q7Z3H4 446 aa12.25□□□□□ -0.45
CCDC142-208ENST00000486335 CSRNP1Q96S65 589 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms