RNA–Protein interactions for RNA: ENST00000486116.5

PTPN7-213, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-213ENST00000486116 HIRAP54198 1017 aaPredicted RBP13.27□□□□□ -0.29
PTPN7-213ENST00000486116 DLK2Q6UY11 383 aa13.27□□□□□ -0.29
PTPN7-213ENST00000486116 TTC5Q8N0Z6 440 aa13.27□□□□□ -0.29
PTPN7-213ENST00000486116 MKI67P46013 3256 aaKnown RBP13.26□□□□□ -0.29
PTPN7-213ENST00000486116 IL13P35225 146 aa13.26□□□□□ -0.29
PTPN7-213ENST00000486116 NUP98P52948 1817 aa13.26□□□□□ -0.29
PTPN7-213ENST00000486116 RGMBQ6NW40 437 aa13.26□□□□□ -0.29
PTPN7-213ENST00000486116 PAPPA2Q9BXP8 1791 aa13.26□□□□□ -0.29
PTPN7-213ENST00000486116 NPC1L1Q9UHC9 1359 aa13.26□□□□□ -0.29
PTPN7-213ENST00000486116 SZT2Q5T011 3432 aa13.26□□□□□ -0.29
PTPN7-213ENST00000486116 PIP4K2AP48426 406 aaPredicted RBP13.25□□□□□ -0.29
PTPN7-213ENST00000486116 GMPSP49915 693 aaPredicted RBP13.25□□□□□ -0.29
PTPN7-213ENST00000486116 CC2D2BQ6DHV5 1058 aa13.25□□□□□ -0.29
PTPN7-213ENST00000486116 CLEC4GQ6UXB4 293 aa13.25□□□□□ -0.29
PTPN7-213ENST00000486116 TPTE2Q6XPS3 522 aa13.25□□□□□ -0.29
PTPN7-213ENST00000486116 CDC37L1Q7L3B6 337 aa13.25□□□□□ -0.29
PTPN7-213ENST00000486116 NIM1KQ8IY84 436 aa13.25□□□□□ -0.29
PTPN7-213ENST00000486116 TRPM4Q8TD43 1214 aa13.25□□□□□ -0.29
PTPN7-213ENST00000486116 ZC3H15Q8WU90 426 aaKnown RBP13.25□□□□□ -0.29
PTPN7-213ENST00000486116 TEX13AQ9BXU3 409 aaPredicted RBP13.25□□□□□ -0.29
PTPN7-213ENST00000486116 ABCC12Q96J65 1359 aa13.24□□□□□ -0.29
PTPN7-213ENST00000486116 FAM177BA6PVY3 158 aa13.24□□□□□ -0.29
PTPN7-213ENST00000486116 MTHFSDQ2M296 383 aaKnown RBP13.24□□□□□ -0.29
PTPN7-213ENST00000486116 CRY2Q49AN0 593 aa13.24□□□□□ -0.29
PTPN7-213ENST00000486116 ZNF790Q6PG37 636 aa13.24□□□□□ -0.29
PTPN7-213ENST00000486116 USP48Q86UV5 1035 aa13.24□□□□□ -0.29
PTPN7-213ENST00000486116 RIC1Q4ADV7 1423 aa13.23□□□□□ -0.29
PTPN7-213ENST00000486116 CXCL9Q07325 125 aa13.23□□□□□ -0.29
PTPN7-213ENST00000486116 NPM2Q86SE8 214 aaKnown RBP13.23□□□□□ -0.29
PTPN7-213ENST00000486116 CCDC102AQ96A19 550 aa13.23□□□□□ -0.29
PTPN7-213ENST00000486116 CSRNP1Q96S65 589 aa13.23□□□□□ -0.29
PTPN7-213ENST00000486116 NIP7Q9Y221 180 aaKnown RBP eCLIP13.23□□□□□ -0.29
PTPN7-213ENST00000486116 CDHR2Q9BYE9 1310 aa13.22□□□□□ -0.29
PTPN7-213ENST00000486116 SHTN1A0MZ66 631 aa13.22□□□□□ -0.29
PTPN7-213ENST00000486116 PPIP5K2O43314 1243 aa13.22□□□□□ -0.29
PTPN7-213ENST00000486116 PKN2Q16513 984 aaKnown RBP13.22□□□□□ -0.29
PTPN7-213ENST00000486116 AOC3Q16853 763 aa13.22□□□□□ -0.29
PTPN7-213ENST00000486116 ZNF652Q9Y2D9 606 aa13.22□□□□□ -0.29
PTPN7-213ENST00000486116 SLC10A3P09131 477 aa13.21□□□□□ -0.29
PTPN7-213ENST00000486116 ZNF157P51786 506 aaPredicted RBP13.21□□□□□ -0.29
PTPN7-213ENST00000486116 GBA2Q9HCG7 927 aaPredicted RBP13.21□□□□□ -0.29
PTPN7-213ENST00000486116 LAMB2P55268 1798 aa13.2□□□□□ -0.3
PTPN7-213ENST00000486116 TRIOBPQ9H2D6 2365 aa13.2□□□□□ -0.3
PTPN7-213ENST00000486116 DLL1O00548 723 aa13.2□□□□□ -0.3
PTPN7-213ENST00000486116 HMOX1P09601 288 aa13.2□□□□□ -0.3
PTPN7-213ENST00000486116 GRIPAP1Q4V328 841 aa13.2□□□□□ -0.3
PTPN7-213ENST00000486116 ZNF296Q8WUU4 475 aaPredicted RBP13.2□□□□□ -0.3
PTPN7-213ENST00000486116 FMNL2Q96PY5 1086 aa13.2□□□□□ -0.3
PTPN7-213ENST00000486116 ZNRF3Q9ULT6 936 aa13.2□□□□□ -0.3
PTPN7-213ENST00000486116 CUL9Q8IWT3 2517 aa13.19□□□□□ -0.3
PTPN7-213ENST00000486116 TCERG1O14776 1098 aaKnown RBP13.19□□□□□ -0.3
PTPN7-213ENST00000486116 HOXA10P31260 410 aaPredicted RBP13.19□□□□□ -0.3
PTPN7-213ENST00000486116 C2orf69Q8N8R5 385 aa13.19□□□□□ -0.3
PTPN7-213ENST00000486116 USP16Q9Y5T5 823 aa13.19□□□□□ -0.3
PTPN7-213ENST00000486116 LAMB4A4D0S4 1761 aa13.19□□□□□ -0.3
PTPN7-213ENST00000486116 HTTP42858 3142 aa13.19□□□□□ -0.3
PTPN7-213ENST00000486116 KIF7Q2M1P5 1343 aa13.18□□□□□ -0.3
PTPN7-213ENST00000486116 PRAMEF22A3QJZ6 481 aa13.18□□□□□ -0.3
PTPN7-213ENST00000486116 PPEF1O14829 653 aaPredicted RBP13.18□□□□□ -0.3
PTPN7-213ENST00000486116 KCNQ3O43525 872 aa13.18□□□□□ -0.3
PTPN7-213ENST00000486116 HLFQ16534 295 aa13.18□□□□□ -0.3
PTPN7-213ENST00000486116 FBXO46Q6PJ61 603 aaPredicted RBP13.18□□□□□ -0.3
PTPN7-213ENST00000486116 NUTM1Q86Y26 1132 aa13.18□□□□□ -0.3
PTPN7-213ENST00000486116 IL17REQ8NFR9 667 aa13.18□□□□□ -0.3
PTPN7-213ENST00000486116 BCL2L13Q9BXK5 485 aa13.18□□□□□ -0.3
PTPN7-213ENST00000486116 HDAC9Q9UKV0 1011 aa13.18□□□□□ -0.3
PTPN7-213ENST00000486116 CEP290O15078 2479 aa13.18□□□□□ -0.3
PTPN7-213ENST00000486116 ADM5C9JUS6 153 aa13.17□□□□□ -0.3
PTPN7-213ENST00000486116 RGL2O15211 777 aa13.17□□□□□ -0.3
PTPN7-213ENST00000486116 GTF2E1P29083 439 aaPredicted RBP13.17□□□□□ -0.3
PTPN7-213ENST00000486116 TEFQ10587 303 aa13.17□□□□□ -0.3
PTPN7-213ENST00000486116 RPGRQ92834 1020 aaKnown RBP13.17□□□□□ -0.3
PTPN7-213ENST00000486116 CNOT7Q9UIV1 285 aaKnown RBP13.17□□□□□ -0.3
PTPN7-213ENST00000486116 TAF1P21675 1872 aa13.16□□□□□ -0.3
PTPN7-213ENST00000486116 KIAA0100Q14667 2235 aaKnown RBP13.16□□□□□ -0.3
PTPN7-213ENST00000486116 POTEFA5A3E0 1075 aa13.16□□□□□ -0.3
PTPN7-213ENST00000486116 RAD17O75943 681 aa13.16□□□□□ -0.3
PTPN7-213ENST00000486116 KRT26Q7Z3Y9 468 aa13.16□□□□□ -0.3
PTPN7-213ENST00000486116 RASAL3Q86YV0 1011 aa13.16□□□□□ -0.3
PTPN7-213ENST00000486116 MICALL2Q8IY33 904 aa13.16□□□□□ -0.3
PTPN7-213ENST00000486116 CRAMP1Q96RY5 1269 aa13.16□□□□□ -0.3
PTPN7-213ENST00000486116 VPS33BQ9H267 617 aa13.16□□□□□ -0.3
PTPN7-213ENST00000486116 COLQQ9Y215 455 aaPredicted RBP13.16□□□□□ -0.3
PTPN7-213ENST00000486116 BRCA2P51587 3418 aa13.16□□□□□ -0.3
PTPN7-213ENST00000486116 DUOX1Q9NRD9 1551 aa13.15□□□□□ -0.3
PTPN7-213ENST00000486116 NBPF26B4DH59 902 aa13.15□□□□□ -0.3
PTPN7-213ENST00000486116 TBC1D8O95759 1140 aa13.15□□□□□ -0.3
PTPN7-213ENST00000486116 EGFRP00533 1210 aa13.15□□□□□ -0.3
PTPN7-213ENST00000486116 NBPF10Q6P3W6 841 aaKnown RBP13.15□□□□□ -0.3
PTPN7-213ENST00000486116 SAMD7Q7Z3H4 446 aa13.15□□□□□ -0.3
PTPN7-213ENST00000486116 MORC1Q86VD1 984 aa13.15□□□□□ -0.3
PTPN7-213ENST00000486116 CENPFP49454 3210 aa13.15□□□□□ -0.31
PTPN7-213ENST00000486116 ANKRD36CQ5JPF3 1778 aa13.15□□□□□ -0.31
PTPN7-213ENST00000486116 DDX60Q8IY21 1712 aaKnown RBP13.14□□□□□ -0.31
PTPN7-213ENST00000486116 TNIP1Q15025 636 aa13.14□□□□□ -0.31
PTPN7-213ENST00000486116 C3orf67Q6ZVT6 689 aa13.14□□□□□ -0.31
PTPN7-213ENST00000486116 REM2Q8IYK8 340 aaPredicted RBP13.14□□□□□ -0.31
PTPN7-213ENST00000486116 RBM17Q96I25 401 aaKnown RBP13.14□□□□□ -0.31
PTPN7-213ENST00000486116 RTFDC1Q9BY42 306 aaPredicted RBP13.14□□□□□ -0.31
PTPN7-213ENST00000486116 LRRC37AA6NMS7 1700 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms