RNA–Protein interactions for RNA: ENST00000485921.5

ABCF3-216, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-216ENST00000485921 TRMT112Q9UI30 125 aaKnown RBP30.06■■■□□ 2.4
ABCF3-216ENST00000485921 KIF16BQ96L93 1317 aa30.05■■■□□ 2.4
ABCF3-216ENST00000485921 BRIP1Q9BX63 1249 aa30.05■■■□□ 2.4
ABCF3-216ENST00000485921 CWC25Q9NXE8 425 aaPredicted RBP30.05■■■□□ 2.4
ABCF3-216ENST00000485921 TGFB2P61812 414 aa30.04■■■□□ 2.4
ABCF3-216ENST00000485921 CWF19L2Q2TBE0 894 aaKnown RBP30.04■■■□□ 2.4
ABCF3-216ENST00000485921 SLC4A10Q6U841 1118 aa30.04■■■□□ 2.4
ABCF3-216ENST00000485921 KIF13BQ9NQT8 1826 aa30.03■■■□□ 2.4
ABCF3-216ENST00000485921 NEURL1BA8MQ27 555 aa30.03■■■□□ 2.4
ABCF3-216ENST00000485921 LINS1Q8NG48 757 aa30.03■■■□□ 2.4
ABCF3-216ENST00000485921 RNF123Q5XPI4 1314 aa30.02■■■□□ 2.4
ABCF3-216ENST00000485921 BEND3Q5T5X7 828 aa30.02■■■□□ 2.4
ABCF3-216ENST00000485921 SH3TC1Q8TE82 1336 aa30.01■■■□□ 2.4
ABCF3-216ENST00000485921 PDE6BP35913 854 aa30.01■■■□□ 2.39
ABCF3-216ENST00000485921 SYNE4Q8N205 404 aa30.01■■■□□ 2.39
ABCF3-216ENST00000485921 ARHGAP45Q92619 1136 aa30.01■■■□□ 2.39
ABCF3-216ENST00000485921 FRAT1Q92837 279 aaPredicted RBP30.01■■■□□ 2.39
ABCF3-216ENST00000485921 API5Q9BZZ5 524 aaKnown RBP30.01■■■□□ 2.39
ABCF3-216ENST00000485921 RCAN3Q9UKA8 241 aa30.01■■■□□ 2.39
ABCF3-216ENST00000485921 ABCC12Q96J65 1359 aa30.01■■■□□ 2.39
ABCF3-216ENST00000485921 A0A0G2JLW4 131 aa30■■■□□ 2.39
ABCF3-216ENST00000485921 IPO8O15397 1037 aaKnown RBP30■■■□□ 2.39
ABCF3-216ENST00000485921 FAM89AQ96GI7 184 aa30■■■□□ 2.39
ABCF3-216ENST00000485921 DPEP1P16444 411 aa29.99■■■□□ 2.39
ABCF3-216ENST00000485921 SLC10A5Q5PT55 438 aa29.99■■■□□ 2.39
ABCF3-216ENST00000485921 ZBTB38Q8NAP3 1195 aaPredicted RBP29.99■■■□□ 2.39
ABCF3-216ENST00000485921 PXDNLA1KZ92 1463 aa29.99■■■□□ 2.39
ABCF3-216ENST00000485921 CHRNA5P30532 468 aa29.98■■■□□ 2.39
ABCF3-216ENST00000485921 RTL5Q5HYW3 569 aaPredicted RBP29.98■■■□□ 2.39
ABCF3-216ENST00000485921 C2CD5Q86YS7 1000 aa29.98■■■□□ 2.39
ABCF3-216ENST00000485921 PCCAP05165 728 aaPredicted RBP29.97■■■□□ 2.39
ABCF3-216ENST00000485921 GCKRQ14397 625 aa29.97■■■□□ 2.39
ABCF3-216ENST00000485921 SRCIN1Q9C0H9 1055 aa29.97■■■□□ 2.39
ABCF3-216ENST00000485921 ANKRD31Q8N7Z5 1873 aa29.97■■■□□ 2.39
ABCF3-216ENST00000485921 H0YIN7 160 aa29.96■■■□□ 2.39
ABCF3-216ENST00000485921 JARID2Q92833 1246 aaPredicted RBP29.96■■■□□ 2.39
ABCF3-216ENST00000485921 PDZRN3Q9UPQ7 1066 aa29.96■■■□□ 2.39
ABCF3-216ENST00000485921 ALDH1L1O75891 902 aa29.95■■■□□ 2.39
ABCF3-216ENST00000485921 HCLS1P14317 486 aaPredicted RBP29.95■■■□□ 2.39
ABCF3-216ENST00000485921 ZKSCAN2Q63HK3 967 aa29.95■■■□□ 2.39
ABCF3-216ENST00000485921 RIC1Q4ADV7 1423 aa29.95■■■□□ 2.38
ABCF3-216ENST00000485921 KLRG2A4D1S0 409 aaPredicted RBP29.94■■■□□ 2.38
ABCF3-216ENST00000485921 KCNA3P22001 575 aa29.94■■■□□ 2.38
ABCF3-216ENST00000485921 ATF7IPQ6VMQ6 1270 aa29.94■■■□□ 2.38
ABCF3-216ENST00000485921 KIAA1551Q9HCM1 1747 aa29.93■■■□□ 2.38
ABCF3-216ENST00000485921 N4BP2Q86UW6 1770 aaPredicted RBP29.93■■■□□ 2.38
ABCF3-216ENST00000485921 IRS4O14654 1257 aaPredicted RBP29.93■■■□□ 2.38
ABCF3-216ENST00000485921 TRIM27P14373 513 aa29.93■■■□□ 2.38
ABCF3-216ENST00000485921 NLRP3Q96P20 1036 aa29.93■■■□□ 2.38
ABCF3-216ENST00000485921 H7C1W4 665 aa29.92■■■□□ 2.38
ABCF3-216ENST00000485921 C3orf67Q6ZVT6 689 aa29.92■■■□□ 2.38
ABCF3-216ENST00000485921 SRGNP10124 158 aa29.91■■■□□ 2.38
ABCF3-216ENST00000485921 TNNQ9UQP3 1299 aa29.91■■■□□ 2.38
ABCF3-216ENST00000485921 CCT4P50991 539 aaKnown RBP29.9■■■□□ 2.38
ABCF3-216ENST00000485921 UBE3BQ7Z3V4 1068 aa29.9■■■□□ 2.38
ABCF3-216ENST00000485921 PIM2Q9P1W9 311 aa29.9■■■□□ 2.38
ABCF3-216ENST00000485921 WWC3Q9ULE0 1092 aa29.9■■■□□ 2.38
ABCF3-216ENST00000485921 TNRC6CQ9HCJ0 1690 aaKnown RBP29.9■■■□□ 2.38
ABCF3-216ENST00000485921 CDHR2Q9BYE9 1310 aa29.9■■■□□ 2.38
ABCF3-216ENST00000485921 HSP90B1P14625 803 aaKnown RBP29.89■■■□□ 2.38
ABCF3-216ENST00000485921 CRY2Q49AN0 593 aa29.89■■■□□ 2.38
ABCF3-216ENST00000485921 ZNF622Q969S3 477 aaKnown RBP eCLIP29.89■■■□□ 2.38
ABCF3-216ENST00000485921 MASTLQ96GX5 879 aa29.89■■■□□ 2.38
ABCF3-216ENST00000485921 ABCC4O15439 1325 aa29.89■■■□□ 2.38
ABCF3-216ENST00000485921 GRM8O00222 908 aa29.88■■■□□ 2.37
ABCF3-216ENST00000485921 CLUAP1Q96AJ1 413 aa29.88■■■□□ 2.37
ABCF3-216ENST00000485921 C9orf78Q9NZ63 289 aaPredicted RBP29.88■■■□□ 2.37
ABCF3-216ENST00000485921 NPR1P16066 1061 aa29.87■■■□□ 2.37
ABCF3-216ENST00000485921 CASP7P55210 303 aa29.87■■■□□ 2.37
ABCF3-216ENST00000485921 STYK1Q6J9G0 422 aa29.87■■■□□ 2.37
ABCF3-216ENST00000485921 COL11A2P13942 1736 aaPredicted RBP29.86■■■□□ 2.37
ABCF3-216ENST00000485921 PDE8AO60658 829 aa29.86■■■□□ 2.37
ABCF3-216ENST00000485921 PELP1Q8IZL8 1130 aaKnown RBP29.86■■■□□ 2.37
ABCF3-216ENST00000485921 RPGRQ92834 1020 aaKnown RBP29.86■■■□□ 2.37
ABCF3-216ENST00000485921 INTS3Q68E01 1043 aaKnown RBP29.85■■■□□ 2.37
ABCF3-216ENST00000485921 DDX60Q8IY21 1712 aaKnown RBP29.85■■■□□ 2.37
ABCF3-216ENST00000485921 DALRD3Q5D0E6 543 aaKnown RBP29.84■■■□□ 2.37
ABCF3-216ENST00000485921 TTLL6Q8N841 843 aa29.84■■■□□ 2.37
ABCF3-216ENST00000485921 SF3B3Q15393 1217 aaKnown RBP29.83■■■□□ 2.37
ABCF3-216ENST00000485921 FTSJ3Q8IY81 847 aaKnown RBP29.83■■■□□ 2.37
ABCF3-216ENST00000485921 DZIP1LQ8IYY4 767 aaKnown RBP29.83■■■□□ 2.37
ABCF3-216ENST00000485921 CNKSR1Q969H4 720 aa29.83■■■□□ 2.37
ABCF3-216ENST00000485921 RBM17Q96I25 401 aaKnown RBP29.83■■■□□ 2.37
ABCF3-216ENST00000485921 BCS1LQ9Y276 419 aa29.83■■■□□ 2.37
ABCF3-216ENST00000485921 DLEC1Q9Y238 1755 aa29.82■■■□□ 2.36
ABCF3-216ENST00000485921 HOXA10P31260 410 aaPredicted RBP29.82■■■□□ 2.36
ABCF3-216ENST00000485921 GPR162Q16538 588 aa29.82■■■□□ 2.36
ABCF3-216ENST00000485921 USP44Q9H0E7 712 aa29.82■■■□□ 2.36
ABCF3-216ENST00000485921 UTYO14607 1347 aa29.81■■■□□ 2.36
ABCF3-216ENST00000485921 PLIN1O60240 522 aa29.81■■■□□ 2.36
ABCF3-216ENST00000485921 NBPF7P0C2Y1 421 aaPredicted RBP29.81■■■□□ 2.36
ABCF3-216ENST00000485921 PLA2G12BQ9BX93 195 aa29.81■■■□□ 2.36
ABCF3-216ENST00000485921 LAMB2P55268 1798 aa29.81■■■□□ 2.36
ABCF3-216ENST00000485921 BRCA1P38398 1863 aaKnown RBP29.8■■■□□ 2.36
ABCF3-216ENST00000485921 YBX3P16989 372 aaKnown RBP eCLIP29.8■■■□□ 2.36
ABCF3-216ENST00000485921 ALDH1B1P30837 517 aa29.8■■■□□ 2.36
ABCF3-216ENST00000485921 TMEM57Q8N5G2 664 aa29.8■■■□□ 2.36
ABCF3-216ENST00000485921 DCAF8L1A6NGE4 600 aa29.79■■■□□ 2.36
ABCF3-216ENST00000485921 RLBP1P12271 317 aa29.79■■■□□ 2.36
ABCF3-216ENST00000485921 CTSWP56202 376 aa29.79■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 186.8 ms